Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:32:27 (1909785): wrapper (7.7.26015): starting
11:32:27 (1909785): wrapper: running run_atlas (--nthreads 8)
[2025-06-19 11:32:27] Arguments: --nthreads 8
[2025-06-19 11:32:27] Threads: 8
[2025-06-19 11:32:27] Checking for CVMFS
[2025-06-19 11:32:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-19 11:32:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-19 11:32:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-19 11:32:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-19 11:32:27] 2.11.3.0 22423 424550 237008 147348 0 731 29273157 45568001 8460 130560 0 2063567124 99.759 1638229740 20386 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-06-19 11:32:27] CVMFS is ok
[2025-06-19 11:32:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-19 11:32:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-19 11:32:27] Further information can be found at the LHC@home message board.
[2025-06-19 11:32:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-19 11:32:27] Checking for apptainer binary...
[2025-06-19 11:32:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-19 11:32:27] Running /usr/bin/apptainer --version
[2025-06-19 11:32:27] apptainer version 1.3.3-1.el9
[2025-06-19 11:32:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-19 11:32:28] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0005.triumf.lcg
[2025-06-19 11:32:28] apptainer works
[2025-06-19 11:32:28] Set ATHENA_PROC_NUMBER=8
[2025-06-19 11:32:28] Set ATHENA_CORE_NUMBER=8
[2025-06-19 11:32:28] Starting ATLAS job with PandaID=6700201744
[2025-06-19 11:32:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-19 11:35:47]  *** The last 200 lines of the pilot log: ***
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | found no stored workdir sizes
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | WARNING  | wrong length of table data, x=[1750357978.0], y=[16852.0] (must be same and length>=4)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | ..............................
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . Timing measurements:
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . get job = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . initial setup = 2 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . payload setup = 4 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . stage-in = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . payload execution = 15 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . stage-out = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . log creation = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | ..............................
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700201744/pilotlog.txt
[2025-06-19 11:35:47] 2025-06-19 18:35:14,414 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-19 11:35:47] - Log from pilotlog.txt -
[2025-06-19 11:35:47] 2025-06-19 18:35:14,401 | INFO     | extracted standard memory fields from prmon json
[2025-06-19 11:35:47] 2025-06-19 18:35:14,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | found no stored workdir sizes
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | WARNING  | wrong length of table data, x=[1750357978.0], y=[16852.0] (must be same and length>=4)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | ..............................
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . Timing measurements:
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . get job = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . initial setup = 2 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . payload setup = 4 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . stage-in = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . payload execution = 15 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . stage-out = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . log creation = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | ..............................
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700201744/pilotlog.txt
[2025-06-19 11:35:47] 2025-06-19 18:35:14,414 | WARNING  | 
[2025-06-19 11:35:47] [begin log extracts]
[2025-06-19 11:35:47] - Log from pilotlog.txt -
[2025-06-19 11:35:47] 2025-06-19 18:35:14,401 | INFO     | extracted standard memory fields from prmon json
[2025-06-19 11:35:47] 2025-06-19 18:35:14,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | WARNING  | found no stored workdir sizes
[2025-06-19 11:35:47] 2025-06-19 18:35:14,402 | INFO     | will not add max space = 0 B to job metrics
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | WARNING  | wrong length of table data, x=[1750357978.0], y=[16852.0] (must be same and length>=4)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | ..............................
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . Timing measurements:
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . get job = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . initial setup = 2 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . payload setup = 4 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . stage-in = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . payload execution = 15 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . stage-out = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,403 | INFO     | . log creation = 0 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | ..............................
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-19 11:35:47] 2025-06-19 18:35:14,404 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6700201744/pilotlog.txt
[2025-06-19 11:35:47] [end log extracts]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,414 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,415 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-19 11:35:47] 2025-06-19 18:35:14,632 | INFO     | 
[2025-06-19 11:35:47] 2025-06-19 18:35:14,632 | INFO     | job summary report
[2025-06-19 11:35:47] 2025-06-19 18:35:14,632 | INFO     | --------------------------------------------------
[2025-06-19 11:35:47] 2025-06-19 18:35:14,632 | INFO     | PanDA job id: 6700201744
[2025-06-19 11:35:47] 2025-06-19 18:35:14,632 | INFO     | task id: 45275320
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-19 11:33:06,644 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | pilot state: failed 
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | transexitcode: 65
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | exeerrorcode: 65
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | exitcode: 65
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | cpuconsumptiontime: 16 s
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | nevents: 0
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | neventsw: 0
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | pid: 1919700
[2025-06-19 11:35:47] 2025-06-19 18:35:14,633 | INFO     | pgrp: 1919700
[2025-06-19 11:35:47] 2025-06-19 18:35:14,634 | INFO     | corecount: 8
[2025-06-19 11:35:47] 2025-06-19 18:35:14,634 | INFO     | event service: False
[2025-06-19 11:35:47] 2025-06-19 18:35:14,634 | INFO     | sizes: {0: 2376908, 3: 2377170, 11: 2377198, 22: 2400510, 23: 2404802, 24: 2404830, 143: 2405124}
[2025-06-19 11:35:47] 2025-06-19 18:35:14,634 | INFO     | --------------------------------------------------
[2025-06-19 11:35:47] 2025-06-19 18:35:14,634 | INFO     | 
[2025-06-19 11:35:47] 2025-06-19 18:35:14,634 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-19 11:35:47] 2025-06-19 18:35:14,648 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | job 6700201744 has completed (purged errors)
[2025-06-19 11:35:47] 2025-06-19 18:35:14,650 | INFO     | overall cleanup function is called
[2025-06-19 11:35:47] 2025-06-19 18:35:16,007 | INFO     | --- collectZombieJob: --- 10, [1919700]
[2025-06-19 11:35:47] 2025-06-19 18:35:16,007 | INFO     | zombie collector waiting for pid 1919700
[2025-06-19 11:35:47] 2025-06-19 18:35:16,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-19 11:35:47] 2025-06-19 18:35:16,007 | INFO     | collected zombie processes
[2025-06-19 11:35:47] 2025-06-19 18:35:16,007 | INFO     | will attempt to kill all subprocesses of pid=1919700
[2025-06-19 11:35:47] 2025-06-19 18:35:16,162 | INFO     | process IDs to be killed: [1919700] (in reverse order)
[2025-06-19 11:35:47] 2025-06-19 18:35:16,223 | WARNING  | found no corresponding commands to process id(s)
[2025-06-19 11:35:47] 2025-06-19 18:35:16,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-19 11:35:47] 2025-06-19 18:35:16,228 | INFO     | did not find any defunct processes belonging to 1919700
[2025-06-19 11:35:47] 2025-06-19 18:35:16,233 | INFO     | did not find any defunct processes belonging to 1919700
[2025-06-19 11:35:47] 2025-06-19 18:35:16,234 | INFO     | ready for new job
[2025-06-19 11:35:47] 2025-06-19 18:35:16,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-19 11:35:47] 2025-06-19 18:35:16,236 | INFO     | ***************************************
[2025-06-19 11:35:47] 2025-06-19 18:35:16,236 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-19 11:35:47] 2025-06-19 18:35:16,236 | INFO     | ***************************************
[2025-06-19 11:35:47] 2025-06-19 18:35:16,236 | INFO     | 
[2025-06-19 11:35:47] 2025-06-19 18:35:16,251 | INFO     | architecture information:
[2025-06-19 11:35:47] 2025-06-19 18:35:16,251 | INFO     | executing command: cat /etc/os-release
[2025-06-19 11:35:47] 2025-06-19 18:35:16,260 | INFO     | cat /etc/os-release:
[2025-06-19 11:35:47] NAME="CentOS Linux"
[2025-06-19 11:35:47] VERSION="7 (Core)"
[2025-06-19 11:35:47] ID="centos"
[2025-06-19 11:35:47] ID_LIKE="rhel fedora"
[2025-06-19 11:35:47] VERSION_ID="7"
[2025-06-19 11:35:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-19 11:35:47] ANSI_COLOR="0;31"
[2025-06-19 11:35:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-19 11:35:47] HOME_URL="https://www.centos.org/"
[2025-06-19 11:35:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-19 11:35:47] 
[2025-06-19 11:35:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-19 11:35:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-19 11:35:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-19 11:35:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-19 11:35:47] 
[2025-06-19 11:35:47] 2025-06-19 18:35:16,260 | INFO     | ***************************************
[2025-06-19 11:35:47] 2025-06-19 18:35:16,762 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-19 11:35:47] 2025-06-19 18:35:16,774 | INFO     | sufficient remaining disk space (1139915358208 B)
[2025-06-19 11:35:47] 2025-06-19 18:35:16,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-19 11:35:47] 2025-06-19 18:35:16,775 | INFO     | current server update state: UPDATING_FINAL
[2025-06-19 11:35:47] 2025-06-19 18:35:16,775 | INFO     | update_server=False
[2025-06-19 11:35:47] 2025-06-19 18:35:16,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-19 11:35:47] 2025-06-19 18:35:17,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-19 11:35:47] 2025-06-19 18:35:17,402 | INFO     | all payload control threads have been joined
[2025-06-19 11:35:47] 2025-06-19 18:35:17,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-19 11:35:47] 2025-06-19 18:35:17,430 | INFO     | aborting loop
[2025-06-19 11:35:47] 2025-06-19 18:35:17,453 | INFO     | all data control threads have been joined
[2025-06-19 11:35:47] 2025-06-19 18:35:17,780 | INFO     | [job] retrieve thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:17,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-19 11:35:47] 2025-06-19 18:35:18,068 | INFO     | [payload] failed_post thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:18,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:18,403 | INFO     | [payload] control thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:18,435 | INFO     | [job] job monitor thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:18,459 | INFO     | [data] control thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:18,480 | INFO     | all job control threads have been joined
[2025-06-19 11:35:47] 2025-06-19 18:35:18,716 | INFO     | [job] validate thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:18,881 | INFO     | [job] create_data_payload thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:19,052 | INFO     | [payload] execute_payloads thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:19,054 | INFO     | [payload] validate_pre thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:19,080 | INFO     | [data] copytool_out thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:19,090 | INFO     | [data] copytool_in thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:19,105 | INFO     | [payload] validate_post thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:19,486 | INFO     | [job] control thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:19,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-19 11:35:47] 2025-06-19 18:35:20,529 | INFO     | [job] queue monitor thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:21,897 | INFO     | [data] queue_monitor thread has finished
[2025-06-19 11:35:47] 2025-06-19 18:35:23,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253773543232)>', '<ExcThread(monitor, started 140253444671232)>']
[2025-06-19 11:35:47] 2025-06-19 18:35:28,322 | INFO     | all workflow threads have been joined
[2025-06-19 11:35:47] 2025-06-19 18:35:28,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-19 11:35:47] 2025-06-19 18:35:28,323 | INFO     | traces error code: 0
[2025-06-19 11:35:47] 2025-06-19 18:35:28,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-19 11:35:47] 2025-06-19 18:35:47,468 | INFO     | PID=1913390 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-19 11:35:47] 2025-06-19 18:35:47,469 | INFO     | .. there are 11 such processes running
[2025-06-19 11:35:47] 2025-06-19 18:35:47,631 | INFO     | found 0 job(s) in 20 queues
[2025-06-19 11:35:47] 2025-06-19 18:35:47,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-19 11:35:47] 2025-06-19 18:35:47,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-19 11:35:47] 2025-06-19 18:35:47,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-19 11:35:47] 2025-06-19 18:35:47,632 | INFO     | [monitor] control thread has ended
[2025-06-19 11:35:47] 2025-06-19 18:35:47,745 [wrapper] ==== pilot stdout END ====
[2025-06-19 11:35:47] 2025-06-19 18:35:47,752 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-19 11:35:47] 2025-06-19 18:35:47,759 [wrapper] pilotpid: 1913390
[2025-06-19 11:35:47] 2025-06-19 18:35:47,766 [wrapper] Pilot exit status: 0
[2025-06-19 11:35:47] 2025-06-19 18:35:47,773 [wrapper] pandaids: 6700201744
[2025-06-19 11:35:47] 2025-06-19 18:35:47,802 [wrapper] cleanup supervisor_pilot 1913396 1913391
[2025-06-19 11:35:47] 2025-06-19 18:35:47,804 [wrapper] Test setup, not cleaning
[2025-06-19 11:35:47] 2025-06-19 18:35:47,806 [wrapper] apfmon messages muted
[2025-06-19 11:35:47] 2025-06-19 18:35:47,808 [wrapper] ==== wrapper stdout END ====
[2025-06-19 11:35:47] 2025-06-19 18:35:47,809 [wrapper] ==== wrapper stderr END ====
[2025-06-19 11:35:47]  *** Error codes and diagnostics ***
[2025-06-19 11:35:47]     "exeErrorCode": 65,
[2025-06-19 11:35:47]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-19 11:35:47]     "pilotErrorCode": 1305,
[2025-06-19 11:35:47]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-19 11:35:47]  *** Listing of results directory ***
[2025-06-19 11:35:47] total 286700
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc      5112 Jun 19 08:37 queuedata.json
[2025-06-19 11:35:47] -rwx------. 1 boinc boinc     36245 Jun 19 08:38 runpilot2-wrapper.sh
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc    530466 Jun 19 08:38 pilot3.tar.gz
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc       100 Jun 19 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-19 11:35:47] -rwxr-xr-x. 1 boinc boinc      7986 Jun 19 11:31 run_atlas
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc       105 Jun 19 11:31 job.xml
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc      6449 Jun 19 11:32 init_data.xml
[2025-06-19 11:35:47] -rw-r--r--. 2 boinc boinc 289534184 Jun 19 11:32 EVNT.45275317._000212.pool.root.1
[2025-06-19 11:35:47] -rw-r--r--. 2 boinc boinc     15095 Jun 19 11:32 start_atlas.sh
[2025-06-19 11:35:47] drwxrwx--x. 2 boinc boinc      4096 Jun 19 11:32 shared
[2025-06-19 11:35:47] -rw-r--r--. 2 boinc boinc    542876 Jun 19 11:32 input.tar.gz
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc         0 Jun 19 11:32 boinc_lockfile
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc      2548 Jun 19 11:32 pandaJob.out
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc    964950 Jun 19 11:32 agis_schedconf.cvmfs.json
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc   1582103 Jun 19 11:32 agis_ddmendpoints.agis.ALL.json
[2025-06-19 11:35:47] drwx------. 4 boinc boinc      4096 Jun 19 11:32 pilot3
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc       521 Jun 19 11:33 boinc_task_state.xml
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc       998 Jun 19 11:33 memory_monitor_summary.json
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc     20801 Jun 19 11:33 log.45275320._005092.job.log.tgz.1
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc      8412 Jun 19 11:35 heartbeat.json
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc        22 Jun 19 11:35 wrapper_checkpoint.txt
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc        95 Jun 19 11:35 pilot_heartbeat.json
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc      8192 Jun 19 11:35 boinc_mmap_file
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc       823 Jun 19 11:35 pilotlog.txt
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc     74514 Jun 19 11:35 log.45275320._005092.job.log.1
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc       188 Jun 19 11:35 output.list
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc       620 Jun 19 11:35 runtime_log
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc    112640 Jun 19 11:35 result.tar.gz
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc      8648 Jun 19 11:35 runtime_log.err
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc       646 Jun 19 11:35 89ELDmTWWm7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUSdKDmGBinnn.diag
[2025-06-19 11:35:47] -rw-r--r--. 1 boinc boinc     21806 Jun 19 11:35 stderr.txt
[2025-06-19 11:35:47] No HITS result produced
[2025-06-19 11:35:47]  *** Contents of shared directory: ***
[2025-06-19 11:35:47] total 283416
[2025-06-19 11:35:47] -rw-r--r--. 2 boinc boinc 289534184 Jun 19 11:32 ATLAS.root_0
[2025-06-19 11:35:47] -rw-r--r--. 2 boinc boinc     15095 Jun 19 11:32 start_atlas.sh
[2025-06-19 11:35:47] -rw-r--r--. 2 boinc boinc    542876 Jun 19 11:32 input.tar.gz
[2025-06-19 11:35:47] -rw-------. 1 boinc boinc    112640 Jun 19 11:35 result.tar.gz
11:35:49 (1909785): run_atlas exited; CPU time 20.901627
11:35:49 (1909785): called boinc_finish(0)

</stderr_txt>
]]>

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