Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:13:12 (2797234): wrapper (7.7.26015): starting
10:13:12 (2797234): wrapper: running run_atlas (--nthreads 8)
[2025-06-19 10:13:12] Arguments: --nthreads 8
[2025-06-19 10:13:12] Threads: 8
[2025-06-19 10:13:12] Checking for CVMFS
[2025-06-19 10:13:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-19 10:13:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-19 10:13:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-19 10:13:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-19 10:13:13] 2.12.6.0 15283 53046 194756 147341 1 68 30378291 32503809 30382 16776704 0 666877916 99.655 580243429 33976 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-19 10:13:13] CVMFS is ok
[2025-06-19 10:13:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-19 10:13:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-19 10:13:13] Further information can be found at the LHC@home message board.
[2025-06-19 10:13:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-19 10:13:13] Checking for apptainer binary...
[2025-06-19 10:13:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-19 10:13:13] Running /usr/bin/apptainer --version
[2025-06-19 10:13:13] apptainer version 1.4.1-1.el9
[2025-06-19 10:13:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-19 10:13:14] c8-7-1.aglt2.org
[2025-06-19 10:13:14] apptainer works
[2025-06-19 10:13:14] Set ATHENA_PROC_NUMBER=8
[2025-06-19 10:13:14] Set ATHENA_CORE_NUMBER=8
[2025-06-19 10:13:14] Starting ATLAS job with PandaID=6699544314
[2025-06-19 10:13:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-19 11:22:16]  *** The last 200 lines of the pilot log: ***
[2025-06-19 11:22:16]  mtime=0
[2025-06-19 11:22:16]  protocol_id=None
[2025-06-19 11:22:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-19 11:22:16]  replicas=None
[2025-06-19 11:22:16]  scope=mc23_13p6TeV
[2025-06-19 11:22:16]  status=None
[2025-06-19 11:22:16]  status_code=0
[2025-06-19 11:22:16]  storage_token=
[2025-06-19 11:22:16]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6699544314/log.45275585._008457.job.log.tgz.1
[2025-06-19 11:22:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/a8/log.45275585._008457.job.log.tgz.1
[2025-06-19 11:22:16]  workdir=None
[2025-06-19 11:22:16] ]
[2025-06-19 11:22:16] 2025-06-19 15:21:34,507 | INFO     | transferring file log.45275585._008457.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6699544314/log.45275585._008457.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-19 11:22:16] 2025-06-19 15:21:34,508 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6699544314/log.45275585._008457.job.log.tgz.1 /tmp/boinchome/slots/1/log.45275585._008457.job
[2025-06-19 11:22:16] 2025-06-19 15:21:34,523 | INFO     | adding to output.list: log.45275585._008457.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/a8/log.45275585._008457.job.log.tg
[2025-06-19 11:22:16] 2025-06-19 15:21:34,524 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-19 11:22:16] 2025-06-19 15:21:34,524 | INFO     | summary of transferred files:
[2025-06-19 11:22:16] 2025-06-19 15:21:34,524 | INFO     |  -- lfn=log.45275585._008457.job.log.tgz.1, status_code=0, status=transferred
[2025-06-19 11:22:16] 2025-06-19 15:21:34,524 | INFO     | stage-out finished correctly
[2025-06-19 11:22:16] 2025-06-19 15:21:34,664 | INFO     | number of running child processes to parent process 2809123: 1
[2025-06-19 11:22:16] 2025-06-19 15:21:34,665 | INFO     | maximum number of monitored processes: 6
[2025-06-19 11:22:16] 2025-06-19 15:21:37,167 | INFO     | monitor loop #292: job 0:6699544314 is in state 'finished'
[2025-06-19 11:22:16] 2025-06-19 15:21:37,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-19 11:22:16] 2025-06-19 15:21:37,760 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-19 11:22:16] 2025-06-19 15:21:39,185 | INFO     | job 6699544314 has state=finished
[2025-06-19 11:22:16] 2025-06-19 15:21:39,185 | INFO     | preparing for final server update for job 6699544314 in state='finished'
[2025-06-19 11:22:16] 2025-06-19 15:21:39,186 | INFO     | this job has now completed (state=finished)
[2025-06-19 11:22:16] 2025-06-19 15:21:39,186 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-19 11:22:16] 2025-06-19 15:21:39,186 | INFO     | log transfer has been attempted: DONE
[2025-06-19 11:22:16] 2025-06-19 15:21:39,186 | INFO     | job 6699544314 has finished - writing final server update
[2025-06-19 11:22:16] 2025-06-19 15:21:39,187 | INFO     | total number of processed events: 400 (read)
[2025-06-19 11:22:16] 2025-06-19 15:21:39,187 | INFO     | executing command: lscpu
[2025-06-19 11:22:16] 2025-06-19 15:21:39,248 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-19 11:22:16] 2025-06-19 15:21:39,670 | INFO     | monitor loop #293: job 0:6699544314 is in state 'finished'
[2025-06-19 11:22:16] 2025-06-19 15:21:39,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-19 11:22:16] 2025-06-19 15:21:42,173 | INFO     | monitor loop #294: job 0:6699544314 is in state 'finished'
[2025-06-19 11:22:16] 2025-06-19 15:21:42,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-19 11:22:16] 2025-06-19 15:21:43,489 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-19 11:22:16] 2025-06-19 15:21:43,506 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3727.0815156249996
[2025-06-19 11:22:16] 2025-06-19 15:21:43,532 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6699544314/memory_monitor_summary.json (trf name=prmon)
[2025-06-19 11:22:16] 2025-06-19 15:21:43,532 | INFO     | extracted standard info from prmon json
[2025-06-19 11:22:16] 2025-06-19 15:21:43,532 | INFO     | extracted standard memory fields from prmon json
[2025-06-19 11:22:16] 2025-06-19 15:21:43,532 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-19 11:22:16] 2025-06-19 15:21:43,533 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 11:22:16] 2025-06-19 15:21:43,533 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | fitting pss+swap vs Time
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | sum of square deviations: 66959395.0
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | sum of deviations: 992076092.5000001
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | mean x: 1750344542.5
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | mean y: 2205704.0833333335
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | -- intersect: -25931047937.950027
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | intersect: -25931047937.950027
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | chi2: 0.008662114000808789
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | -- intersect: -25931047937.950027
[2025-06-19 11:22:16] 2025-06-19 15:21:43,534 | INFO     | current memory leak: 14.82 B/s (using 60 data points, chi2=0.01)
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | could have reported an average CPU frequency of 3765 MHz (6 samples)
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | ..............................
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | . Timing measurements:
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | . get job = 0 s
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | . initial setup = 2 s
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | . payload setup = 6 s
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | . stage-in = 0 s
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | . payload execution = 4056 s
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | . stage-out = 0 s
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | . log creation = 0 s
[2025-06-19 11:22:16] 2025-06-19 15:21:43,535 | INFO     | ..............................
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | 
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | job summary report
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | --------------------------------------------------
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | PanDA job id: 6699544314
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | task id: 45275585
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | errors: (none)
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | pilot state: finished 
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | transexitcode: 0
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | exeerrorcode: 0
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | exeerrordiag: 
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | exitcode: 0
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | exitmsg: OK
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | cpuconsumptiontime: 29503 s
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | nevents: 400
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | neventsw: 0
[2025-06-19 11:22:16] 2025-06-19 15:21:43,590 | INFO     | pid: 2809123
[2025-06-19 11:22:16] 2025-06-19 15:21:43,591 | INFO     | pgrp: 2809123
[2025-06-19 11:22:16] 2025-06-19 15:21:43,591 | INFO     | corecount: 8
[2025-06-19 11:22:16] 2025-06-19 15:21:43,591 | INFO     | event service: False
[2025-06-19 11:22:16] 2025-06-19 15:21:43,591 | INFO     | sizes: {0: 2376949, 1: 2376949, 9: 2377239, 11: 2377267, 4067: 2403243, 4069: 2412241, 4072: 2412425, 4078: 2412619}
[2025-06-19 11:22:16] 2025-06-19 15:21:43,591 | INFO     | --------------------------------------------------
[2025-06-19 11:22:16] 2025-06-19 15:21:43,591 | INFO     | 
[2025-06-19 11:22:16] 2025-06-19 15:21:43,592 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | job 6699544314 has completed (purged errors)
[2025-06-19 11:22:16] 2025-06-19 15:21:43,610 | INFO     | overall cleanup function is called
[2025-06-19 11:22:16] 2025-06-19 15:21:44,617 | INFO     | --- collectZombieJob: --- 10, [2809123]
[2025-06-19 11:22:16] 2025-06-19 15:21:44,618 | INFO     | zombie collector waiting for pid 2809123
[2025-06-19 11:22:16] 2025-06-19 15:21:44,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-19 11:22:16] 2025-06-19 15:21:44,618 | INFO     | collected zombie processes
[2025-06-19 11:22:16] 2025-06-19 15:21:44,618 | INFO     | will attempt to kill all subprocesses of pid=2809123
[2025-06-19 11:22:16] 2025-06-19 15:21:45,009 | INFO     | process IDs to be killed: [2809123] (in reverse order)
[2025-06-19 11:22:16] 2025-06-19 15:21:45,177 | WARNING  | found no corresponding commands to process id(s)
[2025-06-19 11:22:16] 2025-06-19 15:21:45,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-19 11:22:16] 2025-06-19 15:21:45,199 | INFO     | did not find any defunct processes belonging to 2809123
[2025-06-19 11:22:16] 2025-06-19 15:21:45,220 | INFO     | did not find any defunct processes belonging to 2809123
[2025-06-19 11:22:16] 2025-06-19 15:21:45,220 | INFO     | ready for new job
[2025-06-19 11:22:16] 2025-06-19 15:21:45,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-19 11:22:16] 2025-06-19 15:21:45,221 | INFO     | ***************************************
[2025-06-19 11:22:16] 2025-06-19 15:21:45,221 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-19 11:22:16] 2025-06-19 15:21:45,221 | INFO     | ***************************************
[2025-06-19 11:22:16] 2025-06-19 15:21:45,221 | INFO     | 
[2025-06-19 11:22:16] 2025-06-19 15:21:45,238 | INFO     | architecture information:
[2025-06-19 11:22:16] 2025-06-19 15:21:45,239 | INFO     | executing command: cat /etc/os-release
[2025-06-19 11:22:16] 2025-06-19 15:21:45,253 | INFO     | cat /etc/os-release:
[2025-06-19 11:22:16] NAME="CentOS Linux"
[2025-06-19 11:22:16] VERSION="7 (Core)"
[2025-06-19 11:22:16] ID="centos"
[2025-06-19 11:22:16] ID_LIKE="rhel fedora"
[2025-06-19 11:22:16] VERSION_ID="7"
[2025-06-19 11:22:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-19 11:22:16] ANSI_COLOR="0;31"
[2025-06-19 11:22:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-19 11:22:16] HOME_URL="https://www.centos.org/"
[2025-06-19 11:22:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-19 11:22:16] 
[2025-06-19 11:22:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-19 11:22:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-19 11:22:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-19 11:22:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-19 11:22:16] 
[2025-06-19 11:22:16] 2025-06-19 15:21:45,253 | INFO     | ***************************************
[2025-06-19 11:22:16] 2025-06-19 15:21:45,756 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-19 11:22:16] 2025-06-19 15:21:45,771 | INFO     | sufficient remaining disk space (94322556928 B)
[2025-06-19 11:22:16] 2025-06-19 15:21:45,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-19 11:22:16] 2025-06-19 15:21:45,771 | INFO     | current server update state: UPDATING_FINAL
[2025-06-19 11:22:16] 2025-06-19 15:21:45,771 | INFO     | update_server=False
[2025-06-19 11:22:16] 2025-06-19 15:21:45,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-19 11:22:16] 2025-06-19 15:21:45,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-19 11:22:16] 2025-06-19 15:21:45,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-19 11:22:16] 2025-06-19 15:21:45,772 | INFO     | aborting loop
[2025-06-19 11:22:16] 2025-06-19 15:21:46,289 | INFO     | all job control threads have been joined
[2025-06-19 11:22:16] 2025-06-19 15:21:46,772 | INFO     | [job] retrieve thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:46,777 | INFO     | [job] job monitor thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:46,779 | INFO     | all data control threads have been joined
[2025-06-19 11:22:16] 2025-06-19 15:21:47,045 | INFO     | [payload] validate_post thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,116 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,119 | INFO     | [payload] failed_post thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,130 | INFO     | all payload control threads have been joined
[2025-06-19 11:22:16] 2025-06-19 15:21:47,141 | INFO     | [job] validate thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,294 | INFO     | [job] control thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,455 | INFO     | [payload] validate_pre thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,522 | INFO     | [job] create_data_payload thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,688 | INFO     | [payload] execute_payloads thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,775 | INFO     | [data] copytool_out thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,784 | INFO     | [data] control thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:47,796 | INFO     | [data] copytool_in thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:48,135 | INFO     | [payload] control thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:48,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-19 11:22:16] 2025-06-19 15:21:48,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-19 11:22:16] 2025-06-19 15:21:49,604 | INFO     | [job] queue monitor thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:52,329 | INFO     | [data] queue_monitor thread has finished
[2025-06-19 11:22:16] 2025-06-19 15:21:53,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569124955968)>', '<ExcThread(monitor, started 140568088794880)>']
[2025-06-19 11:22:16] 2025-06-19 15:21:58,432 | INFO     | all workflow threads have been joined
[2025-06-19 11:22:16] 2025-06-19 15:21:58,432 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-19 11:22:16] 2025-06-19 15:21:58,432 | INFO     | traces error code: 0
[2025-06-19 11:22:16] 2025-06-19 15:21:58,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-19 11:22:16] 2025-06-19 15:22:15,807 | INFO     | PID=2801608 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-19 11:22:16] 2025-06-19 15:22:15,807 | INFO     | .. there are 37 such processes running
[2025-06-19 11:22:16] 2025-06-19 15:22:15,808 | INFO     | found 0 job(s) in 20 queues
[2025-06-19 11:22:16] 2025-06-19 15:22:15,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-19 11:22:16] 2025-06-19 15:22:15,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-19 11:22:16] 2025-06-19 15:22:15,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-19 11:22:16] 2025-06-19 15:22:15,808 | INFO     | [monitor] control thread has ended
[2025-06-19 11:22:16] 2025-06-19 15:22:15,930 [wrapper] ==== pilot stdout END ====
[2025-06-19 11:22:16] 2025-06-19 15:22:15,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-19 11:22:16] 2025-06-19 15:22:15,936 [wrapper] pilotpid: 2801608
[2025-06-19 11:22:16] 2025-06-19 15:22:15,938 [wrapper] Pilot exit status: 0
[2025-06-19 11:22:16] 2025-06-19 15:22:15,951 [wrapper] pandaids: 6699544314
[2025-06-19 11:22:16] 2025-06-19 15:22:16,060 [wrapper] cleanup supervisor_pilot 3448143 2801609
[2025-06-19 11:22:16] 2025-06-19 15:22:16,063 [wrapper] Test setup, not cleaning
[2025-06-19 11:22:16] 2025-06-19 15:22:16,065 [wrapper] apfmon messages muted
[2025-06-19 11:22:16] 2025-06-19 15:22:16,067 [wrapper] ==== wrapper stdout END ====
[2025-06-19 11:22:16] 2025-06-19 15:22:16,070 [wrapper] ==== wrapper stderr END ====
[2025-06-19 11:22:16]  *** Error codes and diagnostics ***
[2025-06-19 11:22:16]     "exeErrorCode": 0,
[2025-06-19 11:22:16]     "exeErrorDiag": "",
[2025-06-19 11:22:16]     "pilotErrorCode": 0,
[2025-06-19 11:22:16]     "pilotErrorDiag": "",
[2025-06-19 11:22:16]  *** Listing of results directory ***
[2025-06-19 11:22:16] total 525176
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas    530466 Jun 19 00:18 pilot3.tar.gz
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas      5112 Jun 19 00:25 queuedata.json
[2025-06-19 11:22:16] -rwx------. 1 boincer umatlas     36245 Jun 19 00:26 runpilot2-wrapper.sh
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas       100 Jun 19 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-19 11:22:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jun 19 10:13 run_atlas
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas       105 Jun 19 10:13 job.xml
[2025-06-19 11:22:16] -rw-r--r--. 2 boincer umatlas 297004260 Jun 19 10:13 EVNT.45275579._000741.pool.root.1
[2025-06-19 11:22:16] -rw-r--r--. 2 boincer umatlas     15095 Jun 19 10:13 start_atlas.sh
[2025-06-19 11:22:16] drwxrwx--x. 2 boincer umatlas      4096 Jun 19 10:13 shared
[2025-06-19 11:22:16] -rw-r--r--. 2 boincer umatlas    542892 Jun 19 10:13 input.tar.gz
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas         0 Jun 19 10:13 boinc_lockfile
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas      2542 Jun 19 10:13 pandaJob.out
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas    966419 Jun 19 10:13 agis_schedconf.cvmfs.json
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas   1582103 Jun 19 10:13 agis_ddmendpoints.agis.ALL.json
[2025-06-19 11:22:16] drwx------. 4 boincer umatlas      4096 Jun 19 10:13 pilot3
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas      7158 Jun 19 11:18 init_data.xml
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas 235526677 Jun 19 11:21 HITS.45275585._008457.pool.root.1
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas       529 Jun 19 11:21 boinc_task_state.xml
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas      1047 Jun 19 11:21 memory_monitor_summary.json
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas    292123 Jun 19 11:21 log.45275585._008457.job.log.tgz.1
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas        95 Jun 19 11:21 pilot_heartbeat.json
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas      7766 Jun 19 11:21 heartbeat.json
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas      8192 Jun 19 11:22 boinc_mmap_file
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas        27 Jun 19 11:22 wrapper_checkpoint.txt
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas       823 Jun 19 11:22 pilotlog.txt
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas    407867 Jun 19 11:22 log.45275585._008457.job.log.1
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas       357 Jun 19 11:22 output.list
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas       620 Jun 19 11:22 runtime_log
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas    716800 Jun 19 11:22 result.tar.gz
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas       651 Jun 19 11:22 XqVMDmq1Lm7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvgqKDmIxY2Go.diag
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas      8650 Jun 19 11:22 runtime_log.err
[2025-06-19 11:22:16] -rw-r--r--. 1 boincer umatlas     21739 Jun 19 11:22 stderr.txt
[2025-06-19 11:22:16] HITS file was successfully produced:
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas 235526677 Jun 19 11:21 shared/HITS.pool.root.1
[2025-06-19 11:22:16]  *** Contents of shared directory: ***
[2025-06-19 11:22:16] total 521308
[2025-06-19 11:22:16] -rw-r--r--. 2 boincer umatlas 297004260 Jun 19 10:13 ATLAS.root_0
[2025-06-19 11:22:16] -rw-r--r--. 2 boincer umatlas     15095 Jun 19 10:13 start_atlas.sh
[2025-06-19 11:22:16] -rw-r--r--. 2 boincer umatlas    542892 Jun 19 10:13 input.tar.gz
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas 235526677 Jun 19 11:21 HITS.pool.root.1
[2025-06-19 11:22:16] -rw-------. 1 boincer umatlas    716800 Jun 19 11:22 result.tar.gz
11:22:17 (2797234): run_atlas exited; CPU time 29590.499979
11:22:17 (2797234): called boinc_finish(0)

</stderr_txt>
]]>

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