Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:53:43 (459679): wrapper (7.7.26015): starting
10:53:43 (459679): wrapper: running run_atlas (--nthreads 4)
[2025-06-19 10:53:43] Arguments: --nthreads 4
[2025-06-19 10:53:43] Threads: 4
[2025-06-19 10:53:43] Checking for CVMFS
[2025-06-19 10:53:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-19 10:53:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-19 10:53:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-19 10:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-19 10:53:44] 2.9.2.0 173825 963 82960 147332 3 56 30804077 36864001 0 130560 0 741925 99.990 32133 876 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-19 10:53:44] CVMFS is ok
[2025-06-19 10:53:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-19 10:53:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-19 10:53:44] Further information can be found at the LHC@home message board.
[2025-06-19 10:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-19 10:53:44] Checking for apptainer binary...
[2025-06-19 10:53:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-19 10:53:44] Running /usr/bin/apptainer --version
[2025-06-19 10:53:44] apptainer version 1.3.6-6.1
[2025-06-19 10:53:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-19 10:53:44] thA315a
[2025-06-19 10:53:44] apptainer works
[2025-06-19 10:53:44] Set ATHENA_PROC_NUMBER=4
[2025-06-19 10:53:44] Set ATHENA_CORE_NUMBER=4
[2025-06-19 10:53:44] Starting ATLAS job with PandaID=6699260409
[2025-06-19 10:53:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-19 12:20:14]  *** The last 200 lines of the pilot log: ***
[2025-06-19 12:20:14]  protocol_id=None
[2025-06-19 12:20:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-19 12:20:14]  replicas=None
[2025-06-19 12:20:14]  scope=mc23_13p6TeV
[2025-06-19 12:20:14]  status=None
[2025-06-19 12:20:14]  status_code=0
[2025-06-19 12:20:14]  storage_token=
[2025-06-19 12:20:14]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6699260409/log.45275534._001307.job.log.tgz.1
[2025-06-19 12:20:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/72/log.45275534._001307.job.log.tgz.1
[2025-06-19 12:20:14]  workdir=None
[2025-06-19 12:20:14] ]
[2025-06-19 12:20:14] 2025-06-19 10:19:33,530 | INFO     | transferring file log.45275534._001307.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6699260409/log.45275534._001307.job.log.tgz.1 to /local/data/boinc/
[2025-06-19 12:20:14] 2025-06-19 10:19:33,530 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6699260409/log.45275534._001307.job.log.tgz.1 /local/data/boinc/slots/0/log.45275534._0013
[2025-06-19 12:20:14] 2025-06-19 10:19:33,547 | INFO     | adding to output.list: log.45275534._001307.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/72/log.45275534._001307.job.log.tg
[2025-06-19 12:20:14] 2025-06-19 10:19:33,547 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-19 12:20:14] 2025-06-19 10:19:33,547 | INFO     | summary of transferred files:
[2025-06-19 12:20:14] 2025-06-19 10:19:33,547 | INFO     |  -- lfn=log.45275534._001307.job.log.tgz.1, status_code=0, status=transferred
[2025-06-19 12:20:14] 2025-06-19 10:19:33,547 | INFO     | stage-out finished correctly
[2025-06-19 12:20:14] 2025-06-19 10:19:33,587 | INFO     | monitor loop #395: job 0:6699260409 is in state 'finished'
[2025-06-19 12:20:14] 2025-06-19 10:19:33,588 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-19 12:20:14] 2025-06-19 10:19:35,897 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-19 12:20:14] 2025-06-19 10:19:36,091 | INFO     | monitor loop #396: job 0:6699260409 is in state 'finished'
[2025-06-19 12:20:14] 2025-06-19 10:19:36,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-19 12:20:14] 2025-06-19 10:19:36,660 | INFO     | job 6699260409 has state=finished
[2025-06-19 12:20:14] 2025-06-19 10:19:36,660 | INFO     | preparing for final server update for job 6699260409 in state='finished'
[2025-06-19 12:20:14] 2025-06-19 10:19:36,661 | INFO     | this job has now completed (state=finished)
[2025-06-19 12:20:14] 2025-06-19 10:19:36,661 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-19 12:20:14] 2025-06-19 10:19:36,661 | INFO     | log transfer has been attempted: DONE
[2025-06-19 12:20:14] 2025-06-19 10:19:36,661 | INFO     | job 6699260409 has finished - writing final server update
[2025-06-19 12:20:14] 2025-06-19 10:19:36,661 | INFO     | total number of processed events: 400 (read)
[2025-06-19 12:20:14] 2025-06-19 10:19:36,662 | INFO     | executing command: lscpu
[2025-06-19 12:20:14] 2025-06-19 10:19:36,682 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-19 12:20:14] 2025-06-19 10:19:38,595 | INFO     | monitor loop #397: job 0:6699260409 is in state 'finished'
[2025-06-19 12:20:14] 2025-06-19 10:19:38,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-19 12:20:14] 2025-06-19 10:19:41,098 | INFO     | monitor loop #398: job 0:6699260409 is in state 'finished'
[2025-06-19 12:20:14] 2025-06-19 10:19:41,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-19 12:20:14] 2025-06-19 10:19:41,732 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-19 12:20:14] 2025-06-19 10:19:41,733 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3057.7763124999997
[2025-06-19 12:20:14] 2025-06-19 10:19:41,735 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6699260409/memory_monitor_summary.json (trf name=prmon)
[2025-06-19 12:20:14] 2025-06-19 10:19:41,735 | INFO     | extracted standard info from prmon json
[2025-06-19 12:20:14] 2025-06-19 10:19:41,735 | INFO     | extracted standard memory fields from prmon json
[2025-06-19 12:20:14] 2025-06-19 10:19:41,735 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-19 12:20:14] 2025-06-19 10:19:41,735 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-19 12:20:14] 2025-06-19 10:19:41,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-19 12:20:14] 2025-06-19 10:19:41,736 | INFO     | fitting pss+swap vs Time
[2025-06-19 12:20:14] 2025-06-19 10:19:41,736 | INFO     | sum of square deviations: 141539398.0
[2025-06-19 12:20:14] 2025-06-19 10:19:41,736 | INFO     | sum of deviations: -8732103395.999998
[2025-06-19 12:20:14] 2025-06-19 10:19:41,736 | INFO     | mean x: 1750325877.0
[2025-06-19 12:20:14] 2025-06-19 10:19:41,736 | INFO     | mean y: 2488957.6103896103
[2025-06-19 12:20:14] 2025-06-19 10:19:41,736 | INFO     | -- intersect: 107986744582.73587
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | intersect: 107986744582.73587
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | chi2: 0.06339986166295962
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | -- intersect: 107986744582.73587
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | current memory leak: -61.69 B/s (using 77 data points, chi2=0.06)
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | could have reported an average CPU frequency of 3692 MHz (6 samples)
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | ..............................
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | . Timing measurements:
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | . get job = 0 s
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | . initial setup = 1 s
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | . payload setup = 4 s
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | . stage-in = 0 s
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | . payload execution = 5119 s
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | . stage-out = 0 s
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | . log creation = 0 s
[2025-06-19 12:20:14] 2025-06-19 10:19:41,737 | INFO     | ..............................
[2025-06-19 12:20:14] 2025-06-19 10:19:41,777 | INFO     | 
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | job summary report
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | --------------------------------------------------
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | PanDA job id: 6699260409
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | task id: 45275534
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | errors: (none)
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | pilot state: finished 
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | transexitcode: 0
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | exeerrorcode: 0
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | exeerrordiag: 
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | exitcode: 0
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | exitmsg: OK
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | cpuconsumptiontime: 19319 s
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | nevents: 400
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | neventsw: 0
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | pid: 470044
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | pgrp: 470044
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | corecount: 4
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | event service: False
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | sizes: {0: 2377015, 3: 2377277, 10: 2377305, 5127: 2403890, 5128: 2412894, 5130: 2412950, 5136: 2413272}
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | --------------------------------------------------
[2025-06-19 12:20:14] 2025-06-19 10:19:41,778 | INFO     | 
[2025-06-19 12:20:14] 2025-06-19 10:19:41,779 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-19 12:20:14] 2025-06-19 10:19:41,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-19 12:20:14] 2025-06-19 10:19:41,796 | INFO     | job 6699260409 has completed (purged errors)
[2025-06-19 12:20:14] 2025-06-19 10:19:41,796 | INFO     | overall cleanup function is called
[2025-06-19 12:20:14] 2025-06-19 10:19:42,802 | INFO     | --- collectZombieJob: --- 10, [470044]
[2025-06-19 12:20:14] 2025-06-19 10:19:42,803 | INFO     | zombie collector waiting for pid 470044
[2025-06-19 12:20:14] 2025-06-19 10:19:42,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-19 12:20:14] 2025-06-19 10:19:42,803 | INFO     | collected zombie processes
[2025-06-19 12:20:14] 2025-06-19 10:19:42,803 | INFO     | will attempt to kill all subprocesses of pid=470044
[2025-06-19 12:20:14] 2025-06-19 10:19:42,847 | INFO     | process IDs to be killed: [470044] (in reverse order)
[2025-06-19 12:20:14] 2025-06-19 10:19:42,878 | WARNING  | found no corresponding commands to process id(s)
[2025-06-19 12:20:14] 2025-06-19 10:19:42,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-19 12:20:14] 2025-06-19 10:19:42,880 | INFO     | did not find any defunct processes belonging to 470044
[2025-06-19 12:20:14] 2025-06-19 10:19:42,881 | INFO     | did not find any defunct processes belonging to 470044
[2025-06-19 12:20:14] 2025-06-19 10:19:42,882 | INFO     | ready for new job
[2025-06-19 12:20:14] 2025-06-19 10:19:42,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-19 12:20:14] 2025-06-19 10:19:42,882 | INFO     | ***************************************
[2025-06-19 12:20:14] 2025-06-19 10:19:42,882 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-19 12:20:14] 2025-06-19 10:19:42,882 | INFO     | ***************************************
[2025-06-19 12:20:14] 2025-06-19 10:19:42,882 | INFO     | 
[2025-06-19 12:20:14] 2025-06-19 10:19:42,883 | INFO     | architecture information:
[2025-06-19 12:20:14] 2025-06-19 10:19:42,883 | INFO     | executing command: cat /etc/os-release
[2025-06-19 12:20:14] 2025-06-19 10:19:42,896 | INFO     | cat /etc/os-release:
[2025-06-19 12:20:14] NAME="CentOS Linux"
[2025-06-19 12:20:14] VERSION="7 (Core)"
[2025-06-19 12:20:14] ID="centos"
[2025-06-19 12:20:14] ID_LIKE="rhel fedora"
[2025-06-19 12:20:14] VERSION_ID="7"
[2025-06-19 12:20:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-19 12:20:14] ANSI_COLOR="0;31"
[2025-06-19 12:20:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-19 12:20:14] HOME_URL="https://www.centos.org/"
[2025-06-19 12:20:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-19 12:20:14] 
[2025-06-19 12:20:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-19 12:20:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-19 12:20:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-19 12:20:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-19 12:20:14] 
[2025-06-19 12:20:14] 2025-06-19 10:19:42,896 | INFO     | ***************************************
[2025-06-19 12:20:14] 2025-06-19 10:19:43,396 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-19 12:20:14] 2025-06-19 10:19:43,411 | INFO     | sufficient remaining disk space (224384778240 B)
[2025-06-19 12:20:14] 2025-06-19 10:19:43,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-19 12:20:14] 2025-06-19 10:19:43,412 | INFO     | current server update state: UPDATING_FINAL
[2025-06-19 12:20:14] 2025-06-19 10:19:43,412 | INFO     | update_server=False
[2025-06-19 12:20:14] 2025-06-19 10:19:43,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-19 12:20:14] 2025-06-19 10:19:43,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-19 12:20:14] 2025-06-19 10:19:43,602 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-19 12:20:14] 2025-06-19 10:19:43,602 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-19 12:20:14] 2025-06-19 10:19:43,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-19 12:20:14] 2025-06-19 10:19:43,602 | INFO     | will abort loop
[2025-06-19 12:20:14] 2025-06-19 10:19:43,837 | INFO     | all data control threads have been joined
[2025-06-19 12:20:14] 2025-06-19 10:19:44,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-19 12:20:14] 2025-06-19 10:19:44,418 | INFO     | [job] queue monitor thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:44,418 | INFO     | [job] retrieve thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:44,464 | INFO     | all payload control threads have been joined
[2025-06-19 12:20:14] 2025-06-19 10:19:44,608 | INFO     | [job] job monitor thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:44,615 | INFO     | [payload] failed_post thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:44,843 | INFO     | [data] control thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:44,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:45,028 | INFO     | all job control threads have been joined
[2025-06-19 12:20:14] 2025-06-19 10:19:45,108 | INFO     | [payload] validate_post thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:45,197 | INFO     | [job] validate thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:45,286 | INFO     | [job] create_data_payload thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:45,391 | INFO     | [payload] validate_pre thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:45,470 | INFO     | [payload] control thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:45,623 | INFO     | [data] copytool_in thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:45,789 | INFO     | [payload] execute_payloads thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:46,034 | INFO     | [job] control thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:46,108 | INFO     | [data] copytool_out thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:46,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-19 12:20:14] 2025-06-19 10:19:50,457 | INFO     | [data] queue_monitor thread has finished
[2025-06-19 12:20:14] 2025-06-19 10:19:52,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630179817280)>', '<ExcThread(monitor, started 140629661161216)>']
[2025-06-19 12:20:14] 2025-06-19 10:19:57,541 | INFO     | all workflow threads have been joined
[2025-06-19 12:20:14] 2025-06-19 10:19:57,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-19 12:20:14] 2025-06-19 10:19:57,542 | INFO     | traces error code: 0
[2025-06-19 12:20:14] 2025-06-19 10:19:57,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-19 12:20:14] 2025-06-19 10:20:14,288 | INFO     | PID=463411 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-19 12:20:14] 2025-06-19 10:20:14,288 | INFO     | found 0 job(s) in 20 queues
[2025-06-19 12:20:14] 2025-06-19 10:20:14,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-19 12:20:14] 2025-06-19 10:20:14,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-19 12:20:14] 2025-06-19 10:20:14,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-19 12:20:14] 2025-06-19 10:20:14,289 | INFO     | [monitor] control thread has ended
[2025-06-19 12:20:14] 2025-06-19 10:20:14,354 [wrapper] ==== pilot stdout END ====
[2025-06-19 12:20:14] 2025-06-19 10:20:14,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-19 12:20:14] 2025-06-19 10:20:14,361 [wrapper] pilotpid: 463411
[2025-06-19 12:20:14] 2025-06-19 10:20:14,365 [wrapper] Pilot exit status: 0
[2025-06-19 12:20:14] 2025-06-19 10:20:14,376 [wrapper] pandaids: 6699260409
[2025-06-19 12:20:14] 2025-06-19 10:20:14,396 [wrapper] cleanup supervisor_pilot  483102 463412
[2025-06-19 12:20:14] 2025-06-19 10:20:14,399 [wrapper] Test setup, not cleaning
[2025-06-19 12:20:14] 2025-06-19 10:20:14,403 [wrapper] apfmon messages muted
[2025-06-19 12:20:14] 2025-06-19 10:20:14,406 [wrapper] ==== wrapper stdout END ====
[2025-06-19 12:20:14] 2025-06-19 10:20:14,410 [wrapper] ==== wrapper stderr END ====
[2025-06-19 12:20:14]  *** Error codes and diagnostics ***
[2025-06-19 12:20:14]     "exeErrorCode": 0,
[2025-06-19 12:20:14]     "exeErrorDiag": "",
[2025-06-19 12:20:14]     "pilotErrorCode": 0,
[2025-06-19 12:20:14]     "pilotErrorDiag": "",
[2025-06-19 12:20:14]  *** Listing of results directory ***
[2025-06-19 12:20:14] total 517088
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc    530466 Jun 18 17:30 pilot3.tar.gz
[2025-06-19 12:20:14] -rwx------ 1 boinc boinc     36245 Jun 18 17:56 runpilot2-wrapper.sh
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc      5112 Jun 18 17:58 queuedata.json
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc       100 Jun 19 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-19 12:20:14] -rwxr-xr-x 1 boinc boinc      7986 Jun 19 10:53 run_atlas
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc       105 Jun 19 10:53 job.xml
[2025-06-19 12:20:14] -rw-r--r-- 2 boinc boinc 292286414 Jun 19 10:53 EVNT.45275530._000055.pool.root.1
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc      6854 Jun 19 10:53 init_data.xml
[2025-06-19 12:20:14] drwxrwx--x 2 boinc boinc      4096 Jun 19 10:53 shared
[2025-06-19 12:20:14] -rw-r--r-- 2 boinc boinc    542878 Jun 19 10:53 input.tar.gz
[2025-06-19 12:20:14] -rw-r--r-- 2 boinc boinc     15095 Jun 19 10:53 start_atlas.sh
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc         0 Jun 19 10:53 boinc_lockfile
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc      2550 Jun 19 10:53 pandaJob.out
[2025-06-19 12:20:14] -rw------- 1 boinc boinc    966424 Jun 19 10:53 agis_schedconf.cvmfs.json
[2025-06-19 12:20:14] -rw------- 1 boinc boinc   1582103 Jun 19 10:53 agis_ddmendpoints.agis.ALL.json
[2025-06-19 12:20:14] drwx------ 4 boinc boinc      4096 Jun 19 10:53 pilot3
[2025-06-19 12:20:14] -rw------- 1 boinc boinc 231886614 Jun 19 12:19 HITS.45275534._001307.pool.root.1
[2025-06-19 12:20:14] -rw------- 1 boinc boinc        95 Jun 19 12:19 pilot_heartbeat.json
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc       529 Jun 19 12:19 boinc_task_state.xml
[2025-06-19 12:20:14] -rw------- 1 boinc boinc      1022 Jun 19 12:19 memory_monitor_summary.json
[2025-06-19 12:20:14] -rw------- 1 boinc boinc    240727 Jun 19 12:19 log.45275534._001307.job.log.tgz.1
[2025-06-19 12:20:14] -rw------- 1 boinc boinc      7763 Jun 19 12:19 heartbeat.json
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc        27 Jun 19 12:20 wrapper_checkpoint.txt
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc      8192 Jun 19 12:20 boinc_mmap_file
[2025-06-19 12:20:14] -rw------- 1 boinc boinc       746 Jun 19 12:20 pilotlog.txt
[2025-06-19 12:20:14] -rw------- 1 boinc boinc    498704 Jun 19 12:20 log.45275534._001307.job.log.1
[2025-06-19 12:20:14] -rw------- 1 boinc boinc       357 Jun 19 12:20 output.list
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc       620 Jun 19 12:20 runtime_log
[2025-06-19 12:20:14] -rw------- 1 boinc boinc    757760 Jun 19 12:20 result.tar.gz
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc      8739 Jun 19 12:20 runtime_log.err
[2025-06-19 12:20:14] -rw------- 1 boinc boinc       659 Jun 19 12:20 I2PLDmOKAm7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaHbKDmN8npsn.diag
[2025-06-19 12:20:14] -rw-r--r-- 1 boinc boinc     21826 Jun 19 12:20 stderr.txt
[2025-06-19 12:20:14] HITS file was successfully produced:
[2025-06-19 12:20:14] -rw------- 1 boinc boinc 231886614 Jun 19 12:19 shared/HITS.pool.root.1
[2025-06-19 12:20:14]  *** Contents of shared directory: ***
[2025-06-19 12:20:14] total 513184
[2025-06-19 12:20:14] -rw-r--r-- 2 boinc boinc 292286414 Jun 19 10:53 ATLAS.root_0
[2025-06-19 12:20:14] -rw-r--r-- 2 boinc boinc    542878 Jun 19 10:53 input.tar.gz
[2025-06-19 12:20:14] -rw-r--r-- 2 boinc boinc     15095 Jun 19 10:53 start_atlas.sh
[2025-06-19 12:20:14] -rw------- 1 boinc boinc 231886614 Jun 19 12:19 HITS.pool.root.1
[2025-06-19 12:20:14] -rw------- 1 boinc boinc    757760 Jun 19 12:20 result.tar.gz
12:20:16 (459679): run_atlas exited; CPU time 19336.460222
12:20:16 (459679): called boinc_finish(0)

</stderr_txt>
]]>

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