Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:23:25 (476377): wrapper (7.7.26015): starting
16:23:25 (476377): wrapper: running run_atlas (--nthreads 8)
[2025-06-18 16:23:25] Arguments: --nthreads 8
[2025-06-18 16:23:25] Threads: 8
[2025-06-18 16:23:25] Checking for CVMFS
[2025-06-18 16:23:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-18 16:23:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-18 16:23:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-18 16:23:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-18 16:23:26] 2.11.3.0 1807141 54122 215564 147320 0 279 43535908 45568001 12493 130560 0 398658850 99.780 290267021 19408 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-18 16:23:26] CVMFS is ok
[2025-06-18 16:23:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-18 16:23:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-18 16:23:26] Further information can be found at the LHC@home message board.
[2025-06-18 16:23:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-18 16:23:26] Checking for apptainer binary...
[2025-06-18 16:23:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-18 16:23:26] Running /usr/bin/apptainer --version
[2025-06-18 16:23:26] apptainer version 1.3.3-1.el9
[2025-06-18 16:23:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-18 16:23:26] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0010.triumf.lcg
[2025-06-18 16:23:26] apptainer works
[2025-06-18 16:23:27] Set ATHENA_PROC_NUMBER=8
[2025-06-18 16:23:27] Set ATHENA_CORE_NUMBER=8
[2025-06-18 16:23:27] Starting ATLAS job with PandaID=6699260409
[2025-06-18 16:23:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-18 16:28:02]  *** The last 200 lines of the pilot log: ***
[2025-06-18 16:28:02] 2025-06-18 23:27:27,743 | INFO     | extracted standard memory fields from prmon json
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | WARNING  | wrong length of table data, x=[1750289075.0], y=[1770.0] (must be same and length>=4)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | ..............................
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | . Timing measurements:
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | . get job = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . initial setup = 3 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . payload setup = 16 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . stage-in = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . payload execution = 34 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . stage-out = 1 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . log creation = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | ..............................
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-18 16:28:02] 2025-06-18 23:27:27,747 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6699260409/pilotlog.txt
[2025-06-18 16:28:02] 2025-06-18 23:27:27,759 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-18 16:28:02] - Log from pilotlog.txt -
[2025-06-18 16:28:02] 2025-06-18 23:27:27,742 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6699260409/memory_monitor_summary.json (trf name=prmon)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,743 | INFO     | extracted standard info from prmon json
[2025-06-18 16:28:02] 2025-06-18 23:27:27,743 | INFO     | extracted standard memory fields from prmon json
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | WARNING  | wrong length of table data, x=[1750289075.0], y=[1770.0] (must be same and length>=4)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | ..............................
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | . Timing measurements:
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | . get job = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . initial setup = 3 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . payload setup = 16 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . stage-in = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . payload execution = 34 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . stage-out = 1 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . log creation = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | ..............................
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-18 16:28:02] 2025-06-18 23:27:27,747 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6699260409/pilotlog.txt
[2025-06-18 16:28:02] 2025-06-18 23:27:27,759 | WARNING  | 
[2025-06-18 16:28:02] [begin log extracts]
[2025-06-18 16:28:02] - Log from pilotlog.txt -
[2025-06-18 16:28:02] 2025-06-18 23:27:27,742 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6699260409/memory_monitor_summary.json (trf name=prmon)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,743 | INFO     | extracted standard info from prmon json
[2025-06-18 16:28:02] 2025-06-18 23:27:27,743 | INFO     | extracted standard memory fields from prmon json
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-18 16:28:02] 2025-06-18 23:27:27,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | WARNING  | wrong length of table data, x=[1750289075.0], y=[1770.0] (must be same and length>=4)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | ..............................
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | . Timing measurements:
[2025-06-18 16:28:02] 2025-06-18 23:27:27,745 | INFO     | . get job = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . initial setup = 3 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . payload setup = 16 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . stage-in = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . payload execution = 34 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . stage-out = 1 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | . log creation = 0 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | ..............................
[2025-06-18 16:28:02] 2025-06-18 23:27:27,746 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-18 16:28:02] 2025-06-18 23:27:27,747 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6699260409/pilotlog.txt
[2025-06-18 16:28:02] [end log extracts]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,760 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,761 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | 
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | job summary report
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | --------------------------------------------------
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | PanDA job id: 6699260409
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | task id: 45275534
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-18 16:24:53,753 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | pilot state: failed 
[2025-06-18 16:28:02] 2025-06-18 23:27:27,852 | INFO     | transexitcode: 65
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | exeerrorcode: 65
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | exitcode: 65
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | cpuconsumptiontime: 17 s
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | nevents: 0
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | neventsw: 0
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | pid: 498963
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | pgrp: 498963
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | corecount: 8
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | event service: False
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | sizes: {0: 2377009, 9: 2377271, 11: 2377299, 55: 2400685, 56: 2400661, 58: 2405197, 200: 2405335}
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | --------------------------------------------------
[2025-06-18 16:28:02] 2025-06-18 23:27:27,853 | INFO     | 
[2025-06-18 16:28:02] 2025-06-18 23:27:27,854 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-18 16:28:02] 2025-06-18 23:27:27,866 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,866 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,868 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-18 16:28:02] 2025-06-18 23:27:27,868 | INFO     | job 6699260409 has completed (purged errors)
[2025-06-18 16:28:02] 2025-06-18 23:27:27,868 | INFO     | overall cleanup function is called
[2025-06-18 16:28:02] 2025-06-18 23:27:28,893 | INFO     | --- collectZombieJob: --- 10, [498963]
[2025-06-18 16:28:02] 2025-06-18 23:27:28,893 | INFO     | zombie collector waiting for pid 498963
[2025-06-18 16:28:02] 2025-06-18 23:27:28,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-18 16:28:02] 2025-06-18 23:27:28,893 | INFO     | collected zombie processes
[2025-06-18 16:28:02] 2025-06-18 23:27:28,893 | INFO     | will attempt to kill all subprocesses of pid=498963
[2025-06-18 16:28:02] 2025-06-18 23:27:29,424 | INFO     | process IDs to be killed: [498963] (in reverse order)
[2025-06-18 16:28:02] 2025-06-18 23:27:29,919 | WARNING  | found no corresponding commands to process id(s)
[2025-06-18 16:28:02] 2025-06-18 23:27:29,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-18 16:28:02] 2025-06-18 23:27:29,934 | INFO     | did not find any defunct processes belonging to 498963
[2025-06-18 16:28:02] 2025-06-18 23:27:29,944 | INFO     | did not find any defunct processes belonging to 498963
[2025-06-18 16:28:02] 2025-06-18 23:27:29,945 | INFO     | ready for new job
[2025-06-18 16:28:02] 2025-06-18 23:27:29,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-18 16:28:02] 2025-06-18 23:27:29,947 | INFO     | ***************************************
[2025-06-18 16:28:02] 2025-06-18 23:27:29,947 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-18 16:28:02] 2025-06-18 23:27:29,947 | INFO     | ***************************************
[2025-06-18 16:28:02] 2025-06-18 23:27:29,947 | INFO     | 
[2025-06-18 16:28:02] 2025-06-18 23:27:29,961 | INFO     | architecture information:
[2025-06-18 16:28:02] 2025-06-18 23:27:29,980 | INFO     | executing command: cat /etc/os-release
[2025-06-18 16:28:02] 2025-06-18 23:27:30,083 | INFO     | cat /etc/os-release:
[2025-06-18 16:28:02] NAME="CentOS Linux"
[2025-06-18 16:28:02] VERSION="7 (Core)"
[2025-06-18 16:28:02] ID="centos"
[2025-06-18 16:28:02] ID_LIKE="rhel fedora"
[2025-06-18 16:28:02] VERSION_ID="7"
[2025-06-18 16:28:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-18 16:28:02] ANSI_COLOR="0;31"
[2025-06-18 16:28:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-18 16:28:02] HOME_URL="https://www.centos.org/"
[2025-06-18 16:28:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-18 16:28:02] 
[2025-06-18 16:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-18 16:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-18 16:28:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-18 16:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-18 16:28:02] 
[2025-06-18 16:28:02] 2025-06-18 23:27:30,083 | INFO     | ***************************************
[2025-06-18 16:28:02] 2025-06-18 23:27:30,587 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-18 16:28:02] 2025-06-18 23:27:30,730 | INFO     | sufficient remaining disk space (1267319439360 B)
[2025-06-18 16:28:02] 2025-06-18 23:27:30,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-18 16:28:02] 2025-06-18 23:27:30,731 | INFO     | current server update state: UPDATING_FINAL
[2025-06-18 16:28:02] 2025-06-18 23:27:30,731 | INFO     | update_server=False
[2025-06-18 16:28:02] 2025-06-18 23:27:30,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-18 16:28:02] 2025-06-18 23:27:30,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-18 16:28:02] 2025-06-18 23:27:30,733 | INFO     | aborting loop
[2025-06-18 16:28:02] 2025-06-18 23:27:30,978 | INFO     | all job control threads have been joined
[2025-06-18 16:28:02] 2025-06-18 23:27:31,262 | INFO     | all data control threads have been joined
[2025-06-18 16:28:02] 2025-06-18 23:27:31,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-18 16:28:02] 2025-06-18 23:27:31,737 | INFO     | [job] retrieve thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:31,739 | INFO     | [job] job monitor thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:31,758 | INFO     | [payload] execute_payloads thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:31,830 | INFO     | [payload] validate_post thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:31,984 | INFO     | [job] control thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:32,087 | INFO     | all payload control threads have been joined
[2025-06-18 16:28:02] 2025-06-18 23:27:32,210 | INFO     | [job] create_data_payload thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:32,223 | INFO     | [job] validate thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:32,268 | INFO     | [data] control thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:32,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-18 16:28:02] 2025-06-18 23:27:32,331 | INFO     | [payload] validate_pre thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:32,645 | INFO     | [payload] failed_post thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:32,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:32,768 | INFO     | [data] copytool_in thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:32,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-18 16:28:02] 2025-06-18 23:27:33,093 | INFO     | [payload] control thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:33,698 | INFO     | [data] copytool_out thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:33,879 | INFO     | [job] queue monitor thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:36,317 | INFO     | [data] queue_monitor thread has finished
[2025-06-18 16:28:02] 2025-06-18 23:27:38,365 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474411153216)>', '<ExcThread(monitor, started 140473272362752)>']
[2025-06-18 16:28:02] 2025-06-18 23:27:43,391 | INFO     | all workflow threads have been joined
[2025-06-18 16:28:02] 2025-06-18 23:27:43,391 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-18 16:28:02] 2025-06-18 23:27:43,392 | INFO     | traces error code: 0
[2025-06-18 16:28:02] 2025-06-18 23:27:43,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-18 16:28:02] 2025-06-18 23:28:01,730 | INFO     | PID=490158 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-18 16:28:02] 2025-06-18 23:28:01,731 | INFO     | .. there are 19 such processes running
[2025-06-18 16:28:02] 2025-06-18 23:28:01,731 | INFO     | found 0 job(s) in 20 queues
[2025-06-18 16:28:02] 2025-06-18 23:28:01,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-18 16:28:02] 2025-06-18 23:28:01,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-18 16:28:02] 2025-06-18 23:28:01,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-18 16:28:02] 2025-06-18 23:28:01,732 | INFO     | [monitor] control thread has ended
[2025-06-18 16:28:02] 2025-06-18 23:28:01,876 [wrapper] ==== pilot stdout END ====
[2025-06-18 16:28:02] 2025-06-18 23:28:01,925 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-18 16:28:02] 2025-06-18 23:28:01,927 [wrapper] pilotpid: 490158
[2025-06-18 16:28:02] 2025-06-18 23:28:01,930 [wrapper] Pilot exit status: 0
[2025-06-18 16:28:02] 2025-06-18 23:28:02,007 [wrapper] pandaids: 6699260409
[2025-06-18 16:28:02] 2025-06-18 23:28:02,284 [wrapper] cleanup supervisor_pilot  490184 490159
[2025-06-18 16:28:02] 2025-06-18 23:28:02,287 [wrapper] Test setup, not cleaning
[2025-06-18 16:28:02] 2025-06-18 23:28:02,294 [wrapper] apfmon messages muted
[2025-06-18 16:28:02] 2025-06-18 23:28:02,309 [wrapper] ==== wrapper stdout END ====
[2025-06-18 16:28:02] 2025-06-18 23:28:02,325 [wrapper] ==== wrapper stderr END ====
[2025-06-18 16:28:02]  *** Error codes and diagnostics ***
[2025-06-18 16:28:02]     "exeErrorCode": 65,
[2025-06-18 16:28:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-18 16:28:02]     "pilotErrorCode": 1305,
[2025-06-18 16:28:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-18 16:28:02]  *** Listing of results directory ***
[2025-06-18 16:28:02] total 289372
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc    530466 Jun 18 08:30 pilot3.tar.gz
[2025-06-18 16:28:02] -rwx------. 1 boinc boinc     36245 Jun 18 08:56 runpilot2-wrapper.sh
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc      5112 Jun 18 08:58 queuedata.json
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc       100 Jun 18 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-18 16:28:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun 18 16:23 run_atlas
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc       105 Jun 18 16:23 job.xml
[2025-06-18 16:28:02] -rw-r--r--. 2 boinc boinc 292286414 Jun 18 16:23 EVNT.45275530._000055.pool.root.1
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc      6450 Jun 18 16:23 init_data.xml
[2025-06-18 16:28:02] -rw-r--r--. 2 boinc boinc     15095 Jun 18 16:23 start_atlas.sh
[2025-06-18 16:28:02] drwxrwx--x. 2 boinc boinc      4096 Jun 18 16:23 shared
[2025-06-18 16:28:02] -rw-r--r--. 2 boinc boinc    542878 Jun 18 16:23 input.tar.gz
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc         0 Jun 18 16:23 boinc_lockfile
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc      2550 Jun 18 16:23 pandaJob.out
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc    966304 Jun 18 16:23 agis_schedconf.cvmfs.json
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc   1582103 Jun 18 16:23 agis_ddmendpoints.agis.ALL.json
[2025-06-18 16:28:02] drwx------. 4 boinc boinc      4096 Jun 18 16:23 pilot3
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc       523 Jun 18 16:24 boinc_task_state.xml
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc       974 Jun 18 16:24 memory_monitor_summary.json
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc     20245 Jun 18 16:25 log.45275534._001307.job.log.tgz.1
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc      8396 Jun 18 16:27 heartbeat.json
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc      8192 Jun 18 16:27 boinc_mmap_file
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc        22 Jun 18 16:27 wrapper_checkpoint.txt
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc       822 Jun 18 16:28 pilotlog.txt
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc        95 Jun 18 16:28 pilot_heartbeat.json
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc     80116 Jun 18 16:28 log.45275534._001307.job.log.1
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc       188 Jun 18 16:28 output.list
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc       620 Jun 18 16:28 runtime_log
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc    122880 Jun 18 16:28 result.tar.gz
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc      8648 Jun 18 16:28 runtime_log.err
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc       644 Jun 18 16:28 I2PLDmOKAm7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaHbKDmN8npsn.diag
[2025-06-18 16:28:02] -rw-r--r--. 1 boinc boinc      2301 Jun 18 16:28 stderr.txt
[2025-06-18 16:28:02] No HITS result produced
[2025-06-18 16:28:02]  *** Contents of shared directory: ***
[2025-06-18 16:28:02] total 286108
[2025-06-18 16:28:02] -rw-r--r--. 2 boinc boinc 292286414 Jun 18 16:23 ATLAS.root_0
[2025-06-18 16:28:02] -rw-r--r--. 2 boinc boinc     15095 Jun 18 16:23 start_atlas.sh
[2025-06-18 16:28:02] -rw-r--r--. 2 boinc boinc    542878 Jun 18 16:23 input.tar.gz
[2025-06-18 16:28:02] -rw-------. 1 boinc boinc    122880 Jun 18 16:28 result.tar.gz
16:28:04 (476377): run_atlas exited; CPU time 25.445514
16:28:04 (476377): called boinc_finish(0)

</stderr_txt>
]]>

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