Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-18 10:25:54 (35996): Detected: vboxwrapper 26206
2025-06-18 10:25:54 (35996): Detected: BOINC client v8.0.2
2025-06-18 10:25:54 (35996): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-06-18 10:25:54 (35996): Detected: Sandbox Configuration Enabled
2025-06-18 10:25:54 (35996): Successfully copied 'init_data.xml' to the shared directory.
2025-06-18 10:25:54 (35996): Create VM. (boinc_f69b2b11188775b7, slot#6)
2025-06-18 10:25:54 (35996): Setting Memory Size for VM. (4200MB)
2025-06-18 10:25:54 (35996): Setting CPU Count for VM. (2)
2025-06-18 10:25:55 (35996): Setting Chipset Options for VM.
2025-06-18 10:25:55 (35996): Setting Graphics Controller Options for VM.
2025-06-18 10:25:55 (35996): Setting Boot Options for VM.
2025-06-18 10:25:55 (35996): Setting Network Configuration for NAT.
2025-06-18 10:25:55 (35996): Enabling VM Network Access.
2025-06-18 10:25:55 (35996): Disabling USB Support for VM.
2025-06-18 10:25:55 (35996): Disabling COM Port Support for VM.
2025-06-18 10:25:55 (35996): Disabling Audio Support for VM.
2025-06-18 10:25:55 (35996): Disabling Clipboard Support for VM.
2025-06-18 10:25:56 (35996): Disabling Drag and Drop Support for VM.
2025-06-18 10:25:56 (35996): Adding storage controller(s) to VM.
2025-06-18 10:25:56 (35996): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-18 10:25:58 (35996): Adding VirtualBox Guest Additions to VM.
2025-06-18 10:25:58 (35996): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-18 10:25:58 (35996): forwarding host port 53489 to guest port 80
2025-06-18 10:25:58 (35996): Enabling remote desktop for VM.
2025-06-18 10:25:58 (35996): Required extension pack not installed, remote desktop not enabled.
2025-06-18 10:25:58 (35996): Enabling shared directory for VM.
2025-06-18 10:25:59 (35996): Starting VM using VBoxManage interface. (boinc_f69b2b11188775b7, slot#6)
2025-06-18 10:26:07 (35996): Successfully started VM. (PID = '36069')
2025-06-18 10:26:07 (35996): Reporting VM Process ID to BOINC.
2025-06-18 10:26:07 (35996): Guest Log: BIOS: VirtualBox 7.0.12
2025-06-18 10:26:07 (35996): Guest Log: CPUID EDX: 0x178bfbff
2025-06-18 10:26:07 (35996): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-18 10:26:07 (35996): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-18 10:26:07 (35996): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-18 10:26:07 (35996): Detected: Web Application Enabled (http://localhost:53489)
2025-06-18 10:26:07 (35996): Preference change detected
2025-06-18 10:26:07 (35996): Setting CPU throttle for VM. (100%)
2025-06-18 10:26:07 (35996): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-18 10:26:09 (35996): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-18 10:26:09 (35996): Guest Log: BIOS: Booting from Hard Disk...
2025-06-18 10:26:12 (35996): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-18 10:26:12 (35996): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-18 10:26:12 (35996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-18 10:26:26 (35996): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-18 10:26:26 (35996): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-18 10:26:55 (35996): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-18 10:26:55 (35996): Guest Log: 00:00:00.000132 main     Log opened 2025-06-18T17:26:52.692499000Z
2025-06-18 10:26:55 (35996): Guest Log: 00:00:00.000240 main     OS Product: Linux
2025-06-18 10:26:55 (35996): Guest Log: 00:00:00.000281 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-18 10:26:55 (35996): Guest Log: 00:00:00.000317 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-18 10:26:55 (35996): Guest Log: 00:00:00.000354 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-18 10:26:55 (35996): Guest Log: 00:00:00.000355 main     Process ID: 1271
2025-06-18 10:26:55 (35996): Guest Log: 00:00:00.000356 main     Package type: LINUX_64BITS_GENERIC
2025-06-18 10:26:55 (35996): Guest Log: 00:00:00.001957 main     5.2.32 r132073 started. Verbose level = 0
2025-06-18 10:26:55 (35996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-18 10:26:55 (35996): Guest Log: [INFO] Mounting shared directory
2025-06-18 10:26:56 (35996): Guest Log: [INFO] Checking for init_data.xml
2025-06-18 10:27:04 (35996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-18 10:27:04 (35996): Guest Log: [INFO] Detected branch: prod
2025-06-18 10:27:05 (35996): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-18 10:27:05 (35996): Guest Log: Copying input files
2025-06-18 10:27:10 (35996): Guest Log: Copied input files into RunAtlas.
2025-06-18 10:27:11 (35996): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-18 10:27:11 (35996): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-18 10:27:11 (35996): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-18 10:27:11 (35996): Guest Log: Further information can be found at the LHC@home message board.
2025-06-18 10:27:23 (35996): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-18 10:27:24 (35996): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-18 10:27:24 (35996): Guest Log: 2.6.3.0 1547 0 32172 147310 3 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-18 10:27:27 (35996): Guest Log: copied the webapp to /var/www
2025-06-18 10:27:27 (35996): Guest Log: ATHENA_PROC_NUMBER=2
2025-06-18 10:27:27 (35996): Guest Log: ATHENA_CORE_NUMBER=2
2025-06-18 10:27:27 (35996): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-18 10:27:27 (35996): Guest Log:  *** Starting ATLAS job. (PandaID=6699260450 taskID=45275534) ***
2025-06-18 11:10:57 (35996): VM state change detected. (old = 'running', new = 'paused')
2025-06-18 11:11:18 (35996): VM state change detected. (old = 'paused', new = 'running')
2025-06-18 12:06:29 (35996): Status Report: Elapsed Time: '6000.376422'
2025-06-18 12:06:29 (35996): Status Report: CPU Time: '11150.160000'
2025-06-18 12:18:10 (35996): VM state change detected. (old = 'running', new = 'paused')
2025-06-18 12:18:30 (35996): VM state change detected. (old = 'paused', new = 'running')
2025-06-18 13:15:42 (35996): VM state change detected. (old = 'running', new = 'paused')
2025-06-18 13:16:03 (35996): VM state change detected. (old = 'paused', new = 'running')
2025-06-18 13:47:12 (35996): Status Report: Elapsed Time: '12000.376422'
2025-06-18 13:47:12 (35996): Status Report: CPU Time: '23116.930000'
2025-06-18 14:13:15 (35996): VM state change detected. (old = 'running', new = 'paused')
2025-06-18 14:13:35 (35996): VM state change detected. (old = 'paused', new = 'running')
2025-06-18 15:10:37 (35996): VM state change detected. (old = 'running', new = 'paused')
2025-06-18 15:10:57 (35996): VM state change detected. (old = 'paused', new = 'running')
2025-06-18 15:27:54 (35996): Status Report: Elapsed Time: '18000.376422'
2025-06-18 15:27:54 (35996): Status Report: CPU Time: '35092.100000'
2025-06-18 15:46:44 (35996): Guest Log:  *** Job finished ***
2025-06-18 15:46:44 (35996): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:44:42,038 | INFO     | traces error code: 0
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:44:42,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:44:49,914 [wrapper] supervise_pilot (15 min periods counter: 22)
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,509 | INFO     | PID=5865 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,510 | INFO     | found 0 job(s) in 20 queues
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,510 | CRITICAL | thread 'MainThread' is not alive
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,510 | INFO     | [monitor] control thread has ended
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,637 [wrapper] ==== pilot stdout END ====
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,642 [wrapper] ==== wrapper stdout RESUME ====
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,649 [wrapper] pilotpid: 5865
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:01,655 [wrapper] Pilot exit status: 0
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:02,117 [wrapper] pandaids: 6699260450
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:02,165 [wrapper] cleanup supervisor_pilot 22114 5866
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:02,169 [wrapper] Test setup, not cleaning
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:02,178 [wrapper] apfmon messages muted
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:02,183 [wrapper] ==== wrapper stdout END ====
2025-06-18 15:46:44 (35996): Guest Log: 2025-06-18 22:45:02,188 [wrapper] ==== wrapper stderr END ====
2025-06-18 15:46:44 (35996): Guest Log:  *** Error codes and diagnostics ***
2025-06-18 15:46:44 (35996): Guest Log:     "exeErrorCode": 0,
2025-06-18 15:46:44 (35996): Guest Log:     "exeErrorDiag": "",
2025-06-18 15:46:44 (35996): Guest Log:     "pilotErrorCode": 0,
2025-06-18 15:46:44 (35996): Guest Log:     "pilotErrorDiag": "",
2025-06-18 15:46:44 (35996): Guest Log:  *** Listing of results directory ***
2025-06-18 15:46:44 (35996): Guest Log: total 233840
2025-06-18 15:46:44 (35996): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jun 18 15:30 pilot3.tar.gz
2025-06-18 15:46:44 (35996): Guest Log: -rwx------. 1 atlas atlas     36245 Jun 18 15:56 runpilot2-wrapper.sh
2025-06-18 15:46:44 (35996): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jun 18 15:58 queuedata.json
2025-06-18 15:46:44 (35996): Guest Log: -rw-r-----. 1 atlas atlas     15095 Jun 18 17:27 start_atlas.sh
2025-06-18 15:46:44 (35996): Guest Log: -rw-r-----. 1 atlas atlas    542880 Jun 18 17:27 input.tar.gz
2025-06-18 15:46:44 (35996): Guest Log: -rw-r--r--. 1 atlas atlas      8542 Jun 18 17:27 init_data.xml
2025-06-18 15:46:44 (35996): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 18 17:27 EVNT.45275530._000056.pool.root.1 -> /data/./ATLAS.root_0
2025-06-18 15:46:44 (35996): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Jun 18 17:27 pandaJob.out
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas    966328 Jun 18 17:28 agis_schedconf.cvmfs.json
2025-06-18 15:46:44 (35996): Guest Log: drwx------. 4 atlas atlas      4096 Jun 18 17:29 pilot3
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas 232285955 Jun 18 22:43 HITS.45275534._001348.pool.root.1
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas      1026 Jun 18 22:44 memory_monitor_summary.json
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas   1582103 Jun 18 22:44 agis_ddmendpoints.agis.ALL.json
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas    327169 Jun 18 22:44 log.45275534._001348.job.log.tgz.1
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas      7818 Jun 18 22:44 heartbeat.json
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas        95 Jun 18 22:45 pilot_heartbeat.json
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas       814 Jun 18 22:45 pilotlog.txt
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas   1360740 Jun 18 22:45 log.45275534._001348.job.log.1
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas       357 Jun 18 22:45 output.list
2025-06-18 15:46:44 (35996): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 18 22:45 runtime_log
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas   1710080 Jun 18 22:45 result.tar.gz
2025-06-18 15:46:44 (35996): Guest Log: -rw-r--r--. 1 atlas atlas      8618 Jun 18 22:45 runtime_log.err
2025-06-18 15:46:44 (35996): Guest Log: -rw-------. 1 atlas atlas       665 Jun 18 22:45 5ftLDmOKAm7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwHbKDmKh6Hrn.diag
2025-06-18 15:46:45 (35996): Guest Log: Looking for outputfile HITS.45275534._001348.pool.root.1
2025-06-18 15:46:45 (35996): Guest Log: HITS file was successfully produced
2025-06-18 15:46:45 (35996): Guest Log: -rw-------. 1 atlas atlas 232285955 Jun 18 22:43 /home/atlas/RunAtlas/HITS.45275534._001348.pool.root.1
2025-06-18 15:46:45 (35996): Guest Log: Successfully finished the ATLAS job!
2025-06-18 15:46:45 (35996): Guest Log: Copying the results back to the shared directory!
2025-06-18 15:46:45 (35996): Guest Log:  *** Contents of shared directory: ***
2025-06-18 15:46:45 (35996): Guest Log: total 282408
2025-06-18 15:46:45 (35996): Guest Log: -rw-rw----. 1 root root 286897644 Jun 18 17:25 ATLAS.root_0
2025-06-18 15:46:45 (35996): Guest Log: -rw-rw-r--. 1 root root      8542 Jun 18 17:25 init_data.xml
2025-06-18 15:46:45 (35996): Guest Log: -rw-rw----. 1 root root    542880 Jun 18 17:25 input.tar.gz
2025-06-18 15:46:45 (35996): Guest Log: -rw-r--r--. 1 root root   1710080 Jun 18  2025 result.tar.gz
2025-06-18 15:46:45 (35996): Guest Log: -rw-rw----. 1 root root     15095 Jun 18 17:25 start_atlas.sh
2025-06-18 15:46:45 (35996): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-18 15:46:45 (35996): VM Completion File Detected.
2025-06-18 15:46:45 (35996): Powering off VM.
2025-06-18 15:46:45 (35996): Successfully stopped VM.
2025-06-18 15:46:45 (35996): Deregistering VM. (boinc_f69b2b11188775b7, slot#6)
2025-06-18 15:46:46 (35996): Removing network bandwidth throttle group from VM.
2025-06-18 15:46:46 (35996): Removing VM from VirtualBox.
15:46:51 (35996): called boinc_finish(0)

</stderr_txt>
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