Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:59 (2620825): wrapper (7.7.26015): starting
09:30:59 (2620825): wrapper: running run_atlas (--nthreads 12)
[2025-06-11 09:30:59] Arguments: --nthreads 12
[2025-06-11 09:30:59] Threads: 12
[2025-06-11 09:30:59] Checking for CVMFS
[2025-06-11 09:31:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-11 09:31:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-11 09:31:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-11 09:31:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-11 09:31:00] 2.12.6.0 3369999 33414 409888 147046 0 14 20456734 32935937 11319 16776704 0 130453999 99.706 98401145 35470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-11 09:31:00] CVMFS is ok
[2025-06-11 09:31:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-11 09:31:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-11 09:31:00] Further information can be found at the LHC@home message board.
[2025-06-11 09:31:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-11 09:31:00] Checking for apptainer binary...
[2025-06-11 09:31:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-11 09:31:00] Running /usr/bin/apptainer --version
[2025-06-11 09:31:01] apptainer version 1.4.1-1.el9
[2025-06-11 09:31:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-11 09:31:01] c6-2-29-1.aglt2.org
[2025-06-11 09:31:01] apptainer works
[2025-06-11 09:31:01] Set ATHENA_PROC_NUMBER=12
[2025-06-11 09:31:01] Set ATHENA_CORE_NUMBER=12
[2025-06-11 09:31:01] Starting ATLAS job with PandaID=6677578549
[2025-06-11 09:31:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-11 11:48:55]  *** The last 200 lines of the pilot log: ***
[2025-06-11 11:48:55] 2025-06-11 15:48:33,515 | INFO     | monitor loop #534: job 0:6677578549 is in state 'finished'
[2025-06-11 11:48:55] 2025-06-11 15:48:33,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-11 11:48:55] 2025-06-11 15:48:36,019 | INFO     | monitor loop #535: job 0:6677578549 is in state 'finished'
[2025-06-11 11:48:55] 2025-06-11 15:48:36,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,393 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-11 11:48:55] 2025-06-11 15:48:37,393 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677578549/memory_monitor_summary.json (trf name=prmon)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,394 | INFO     | extracted standard info from prmon json
[2025-06-11 11:48:55] 2025-06-11 15:48:37,394 | INFO     | extracted standard memory fields from prmon json
[2025-06-11 11:48:55] 2025-06-11 15:48:37,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-11 11:48:55] 2025-06-11 15:48:37,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-11 11:48:55] 2025-06-11 15:48:37,395 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-11 11:48:55] 2025-06-11 15:48:37,399 | INFO     | fitting pss+swap vs Time
[2025-06-11 11:48:55] 2025-06-11 15:48:37,400 | INFO     | sum of square deviations: 746040175.5522376
[2025-06-11 11:48:55] 2025-06-11 15:48:37,401 | INFO     | sum of deviations: -5466872966.970147
[2025-06-11 11:48:55] 2025-06-11 15:48:37,401 | INFO     | mean x: 1749652798.6716418
[2025-06-11 11:48:55] 2025-06-11 15:48:37,401 | INFO     | mean y: 2372385.4552238807
[2025-06-11 11:48:55] 2025-06-11 15:48:37,401 | INFO     | -- intersect: 12823571430.883724
[2025-06-11 11:48:55] 2025-06-11 15:48:37,401 | INFO     | intersect: 12823571430.883724
[2025-06-11 11:48:55] 2025-06-11 15:48:37,402 | INFO     | chi2: 2.160988277843493
[2025-06-11 11:48:55] 2025-06-11 15:48:37,402 | INFO     | sum of square deviations: 665608472.8992261
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | sum of deviations: -5171808720.844956
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | mean x: 1749652646.1782947
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | mean y: 2372936.3410852714
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | -- intersect: 13597255186.772366
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | intersect: 13597255186.772366
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | chi2: 2.1577036614297667
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | current chi2=2.1577036614297667 (change=0.15199603104760626 %)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | right removable region: 128
[2025-06-11 11:48:55] 2025-06-11 15:48:37,403 | INFO     | sum of square deviations: 665594442.8992261
[2025-06-11 11:48:55] 2025-06-11 15:48:37,404 | INFO     | sum of deviations: -27521633827.751953
[2025-06-11 11:48:55] 2025-06-11 15:48:37,404 | INFO     | mean x: 1749652951.1782947
[2025-06-11 11:48:55] 2025-06-11 15:48:37,404 | INFO     | mean y: 2413645.9457364343
[2025-06-11 11:48:55] 2025-06-11 15:48:37,404 | INFO     | -- intersect: 72348732581.88255
[2025-06-11 11:48:55] 2025-06-11 15:48:37,404 | INFO     | intersect: 72348732581.88255
[2025-06-11 11:48:55] 2025-06-11 15:48:37,404 | INFO     | chi2: 0.4419499603074954
[2025-06-11 11:48:55] 2025-06-11 15:48:37,404 | INFO     | current chi2=0.4419499603074954 (change=79.54871089127198 %)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,405 | INFO     | sum of square deviations: 591148822.7338698
[2025-06-11 11:48:55] 2025-06-11 15:48:37,405 | INFO     | sum of deviations: -27785017757.217754
[2025-06-11 11:48:55] 2025-06-11 15:48:37,405 | INFO     | mean x: 1749653103.685484
[2025-06-11 11:48:55] 2025-06-11 15:48:37,405 | INFO     | mean y: 2413974.379032258
[2025-06-11 11:48:55] 2025-06-11 15:48:37,405 | INFO     | -- intersect: 82239137935.10321
[2025-06-11 11:48:55] 2025-06-11 15:48:37,406 | INFO     | intersect: 82239137935.10321
[2025-06-11 11:48:55] 2025-06-11 15:48:37,406 | INFO     | chi2: 0.3691670478184529
[2025-06-11 11:48:55] 2025-06-11 15:48:37,406 | INFO     | current chi2=0.3691670478184529 (change=16.46858672380067 %)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,406 | INFO     | left removable region: 20
[2025-06-11 11:48:55] 2025-06-11 15:48:37,406 | INFO     | sum of square deviations: 390564960.9166667
[2025-06-11 11:48:55] 2025-06-11 15:48:37,406 | INFO     | sum of deviations: -15114018659.055553
[2025-06-11 11:48:55] 2025-06-11 15:48:37,407 | INFO     | mean x: 1749653225.6944444
[2025-06-11 11:48:55] 2025-06-11 15:48:37,407 | INFO     | mean y: 2387251.574074074
[2025-06-11 11:48:55] 2025-06-11 15:48:37,407 | INFO     | -- intersect: 67710180183.016495
[2025-06-11 11:48:55] 2025-06-11 15:48:37,407 | INFO     | intersect: 67710180183.016495
[2025-06-11 11:48:55] 2025-06-11 15:48:37,407 | INFO     | chi2: 0.30651549739332634
[2025-06-11 11:48:55] 2025-06-11 15:48:37,407 | INFO     | -- intersect: 67710180183.016495
[2025-06-11 11:48:55] 2025-06-11 15:48:37,407 | INFO     | current memory leak: -38.70 B/s (using 108 data points, chi2=0.31)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,408 | INFO     | ..............................
[2025-06-11 11:48:55] 2025-06-11 15:48:37,408 | INFO     | . Timing measurements:
[2025-06-11 11:48:55] 2025-06-11 15:48:37,408 | INFO     | . get job = 0 s
[2025-06-11 11:48:55] 2025-06-11 15:48:37,408 | INFO     | . initial setup = 3 s
[2025-06-11 11:48:55] 2025-06-11 15:48:37,408 | INFO     | . payload setup = 14 s
[2025-06-11 11:48:55] 2025-06-11 15:48:37,408 | INFO     | . stage-in = 0 s
[2025-06-11 11:48:55] 2025-06-11 15:48:37,408 | INFO     | . payload execution = 8171 s
[2025-06-11 11:48:55] 2025-06-11 15:48:37,408 | INFO     | . stage-out = 0 s
[2025-06-11 11:48:55] 2025-06-11 15:48:37,409 | INFO     | . log creation = 0 s
[2025-06-11 11:48:55] 2025-06-11 15:48:37,409 | INFO     | ..............................
[2025-06-11 11:48:55] 2025-06-11 15:48:37,504 | INFO     | 
[2025-06-11 11:48:55] 2025-06-11 15:48:37,504 | INFO     | job summary report
[2025-06-11 11:48:55] 2025-06-11 15:48:37,504 | INFO     | --------------------------------------------------
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | PanDA job id: 6677578549
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | task id: 45006595
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | errors: (none)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | pilot state: finished 
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | transexitcode: 0
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | exeerrorcode: 0
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | exeerrordiag: 
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | exitcode: 0
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | exitmsg: OK
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | cpuconsumptiontime: 37990 s
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | nevents: 400
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | neventsw: 0
[2025-06-11 11:48:55] 2025-06-11 15:48:37,505 | INFO     | pid: 2631350
[2025-06-11 11:48:55] 2025-06-11 15:48:37,506 | INFO     | pgrp: 2631350
[2025-06-11 11:48:55] 2025-06-11 15:48:37,506 | INFO     | corecount: 12
[2025-06-11 11:48:55] 2025-06-11 15:48:37,506 | INFO     | event service: False
[2025-06-11 11:48:55] 2025-06-11 15:48:37,506 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 15: 2397604, 23: 2397632, 8189: 2425288, 8190: 2434229, 8193: 2434285, 8201: 2434455}
[2025-06-11 11:48:55] 2025-06-11 15:48:37,506 | INFO     | --------------------------------------------------
[2025-06-11 11:48:55] 2025-06-11 15:48:37,506 | INFO     | 
[2025-06-11 11:48:55] 2025-06-11 15:48:37,506 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-11 11:48:55] 2025-06-11 15:48:37,527 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,527 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,528 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,528 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,529 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,530 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-11 11:48:55] 2025-06-11 15:48:37,530 | INFO     | job 6677578549 has completed (purged errors)
[2025-06-11 11:48:55] 2025-06-11 15:48:37,530 | INFO     | overall cleanup function is called
[2025-06-11 11:48:55] 2025-06-11 15:48:38,540 | INFO     | --- collectZombieJob: --- 10, [2631350]
[2025-06-11 11:48:55] 2025-06-11 15:48:38,540 | INFO     | zombie collector waiting for pid 2631350
[2025-06-11 11:48:55] 2025-06-11 15:48:38,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-11 11:48:55] 2025-06-11 15:48:38,541 | INFO     | collected zombie processes
[2025-06-11 11:48:55] 2025-06-11 15:48:38,541 | INFO     | will attempt to kill all subprocesses of pid=2631350
[2025-06-11 11:48:55] 2025-06-11 15:48:38,550 | INFO     | PID=2624402 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-11 11:48:55] 2025-06-11 15:48:38,551 | INFO     | .. there are 8 such processes running
[2025-06-11 11:48:55] 2025-06-11 15:48:38,779 | INFO     | process IDs to be killed: [2631350] (in reverse order)
[2025-06-11 11:48:55] 2025-06-11 15:48:38,855 | WARNING  | found no corresponding commands to process id(s)
[2025-06-11 11:48:55] 2025-06-11 15:48:38,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-11 11:48:55] 2025-06-11 15:48:38,864 | INFO     | did not find any defunct processes belonging to 2631350
[2025-06-11 11:48:55] 2025-06-11 15:48:38,873 | INFO     | did not find any defunct processes belonging to 2631350
[2025-06-11 11:48:55] 2025-06-11 15:48:38,873 | INFO     | ready for new job
[2025-06-11 11:48:55] 2025-06-11 15:48:38,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-11 11:48:55] 2025-06-11 15:48:38,875 | INFO     | **************************************
[2025-06-11 11:48:55] 2025-06-11 15:48:38,875 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-11 11:48:55] 2025-06-11 15:48:38,876 | INFO     | **************************************
[2025-06-11 11:48:55] 2025-06-11 15:48:38,876 | INFO     | 
[2025-06-11 11:48:55] 2025-06-11 15:48:38,891 | INFO     | architecture information:
[2025-06-11 11:48:55] 2025-06-11 15:48:38,891 | INFO     | executing command: cat /etc/os-release
[2025-06-11 11:48:55] 2025-06-11 15:48:38,906 | INFO     | cat /etc/os-release:
[2025-06-11 11:48:55] NAME="CentOS Linux"
[2025-06-11 11:48:55] VERSION="7 (Core)"
[2025-06-11 11:48:55] ID="centos"
[2025-06-11 11:48:55] ID_LIKE="rhel fedora"
[2025-06-11 11:48:55] VERSION_ID="7"
[2025-06-11 11:48:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-11 11:48:55] ANSI_COLOR="0;31"
[2025-06-11 11:48:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-11 11:48:55] HOME_URL="https://www.centos.org/"
[2025-06-11 11:48:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-11 11:48:55] 
[2025-06-11 11:48:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-11 11:48:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-11 11:48:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-11 11:48:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-11 11:48:55] 
[2025-06-11 11:48:55] 2025-06-11 15:48:38,906 | INFO     | **************************************
[2025-06-11 11:48:55] 2025-06-11 15:48:39,409 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-11 11:48:55] 2025-06-11 15:48:39,429 | INFO     | sufficient remaining disk space (76585893888 B)
[2025-06-11 11:48:55] 2025-06-11 15:48:39,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-11 11:48:55] 2025-06-11 15:48:39,430 | INFO     | current server update state: UPDATING_FINAL
[2025-06-11 11:48:55] 2025-06-11 15:48:39,430 | INFO     | update_server=False
[2025-06-11 11:48:55] 2025-06-11 15:48:39,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-11 11:48:55] 2025-06-11 15:48:39,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-11 11:48:55] 2025-06-11 15:48:39,430 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-11 11:48:55] 2025-06-11 15:48:39,431 | INFO     | found 0 job(s) in 20 queues
[2025-06-11 11:48:55] 2025-06-11 15:48:39,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-11 11:48:55] 2025-06-11 15:48:39,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-11 11:48:55] 2025-06-11 15:48:39,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-11 11:48:55] 2025-06-11 15:48:39,529 | INFO     | aborting loop
[2025-06-11 11:48:55] 2025-06-11 15:48:39,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-11 11:48:55] 2025-06-11 15:48:39,950 | INFO     | all data control threads have been joined
[2025-06-11 11:48:55] 2025-06-11 15:48:39,989 | INFO     | all payload control threads have been joined
[2025-06-11 11:48:55] 2025-06-11 15:48:40,435 | INFO     | [job] retrieve thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:40,436 | INFO     | [job] queue monitor thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:40,443 | INFO     | [payload] failed_post thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:40,505 | INFO     | [job] validate thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:40,534 | INFO     | [job] job monitor thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:40,573 | INFO     | [payload] validate_pre thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:40,768 | INFO     | [data] copytool_in thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:40,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-11 11:48:55] 2025-06-11 15:48:40,956 | INFO     | [data] control thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:40,995 | INFO     | [payload] control thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:41,056 | INFO     | all job control threads have been joined
[2025-06-11 11:48:55] 2025-06-11 15:48:41,187 | INFO     | [payload] validate_post thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:41,761 | INFO     | [payload] execute_payloads thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:41,832 | INFO     | [data] copytool_out thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:41,932 | INFO     | [job] create_data_payload thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:42,062 | INFO     | [job] control thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:44,874 | INFO     | [data] queue_monitor thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:49,578 | INFO     | job.realtimelogging is not enabled
[2025-06-11 11:48:55] 2025-06-11 15:48:50,583 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-11 11:48:55] 2025-06-11 15:48:50,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482631944000)>', '<ExcThread(monitor, started 140482359301888)>']
[2025-06-11 11:48:55] 2025-06-11 15:48:51,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-11 11:48:55] 2025-06-11 15:48:51,491 | INFO     | [monitor] control thread has ended
[2025-06-11 11:48:55] 2025-06-11 15:48:55,633 | INFO     | all workflow threads have been joined
[2025-06-11 11:48:55] 2025-06-11 15:48:55,633 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-11 11:48:55] 2025-06-11 15:48:55,634 | INFO     | traces error code: 0
[2025-06-11 11:48:55] 2025-06-11 15:48:55,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-11 11:48:55] 2025-06-11 15:48:55,755 [wrapper] ==== pilot stdout END ====
[2025-06-11 11:48:55] 2025-06-11 15:48:55,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-11 11:48:55] 2025-06-11 15:48:55,759 [wrapper] pilotpid: 2624402
[2025-06-11 11:48:55] 2025-06-11 15:48:55,761 [wrapper] Pilot exit status: 0
[2025-06-11 11:48:55] 2025-06-11 15:48:55,771 [wrapper] pandaids: 6677578549
[2025-06-11 11:48:55] 2025-06-11 15:48:55,824 [wrapper] cleanup supervisor_pilot 2827483 2624403
[2025-06-11 11:48:55] 2025-06-11 15:48:55,827 [wrapper] Test setup, not cleaning
[2025-06-11 11:48:55] 2025-06-11 15:48:55,830 [wrapper] apfmon messages muted
[2025-06-11 11:48:55] 2025-06-11 15:48:55,834 [wrapper] ==== wrapper stdout END ====
[2025-06-11 11:48:55] 2025-06-11 15:48:55,836 [wrapper] ==== wrapper stderr END ====
[2025-06-11 11:48:55]  *** Error codes and diagnostics ***
[2025-06-11 11:48:55]     "exeErrorCode": 0,
[2025-06-11 11:48:55]     "exeErrorDiag": "",
[2025-06-11 11:48:55]     "pilotErrorCode": 0,
[2025-06-11 11:48:55]     "pilotErrorDiag": "",
[2025-06-11 11:48:55]  *** Listing of results directory ***
[2025-06-11 11:48:55] total 388732
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 06:43 pilot3.tar.gz
[2025-06-11 11:48:55] -rwx------. 1 boincer umatlas     37140 Jun  3 06:48 runpilot2-wrapper.sh
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 06:48 queuedata.json
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas       100 Jun 11 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-11 11:48:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun 11 09:30 run_atlas
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas       105 Jun 11 09:30 job.xml
[2025-06-11 11:48:55] -rw-r--r--. 2 boincer umatlas 217494195 Jun 11 09:30 EVNT.45006593._001180.pool.root.1
[2025-06-11 11:48:55] -rw-r--r--. 2 boincer umatlas     15093 Jun 11 09:30 start_atlas.sh
[2025-06-11 11:48:55] drwxrwx--x. 2 boincer umatlas      4096 Jun 11 09:30 shared
[2025-06-11 11:48:55] -rw-r--r--. 2 boincer umatlas    508876 Jun 11 09:30 input.tar.gz
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas         0 Jun 11 09:30 boinc_lockfile
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas      2525 Jun 11 09:31 pandaJob.out
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas    975252 Jun 11 09:31 agis_schedconf.cvmfs.json
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas   1598969 Jun 11 09:31 agis_ddmendpoints.agis.ALL.json
[2025-06-11 11:48:55] drwx------. 4 boincer umatlas      4096 Jun 11 09:31 pilot3
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas      6841 Jun 11 11:46 init_data.xml
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas       530 Jun 11 11:47 boinc_task_state.xml
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas 174529928 Jun 11 11:47 HITS.45006595._029508.pool.root.1
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas        95 Jun 11 11:47 pilot_heartbeat.json
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas      1040 Jun 11 11:48 memory_monitor_summary.json
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas    392083 Jun 11 11:48 log.45006595._029508.job.log.tgz.1
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas      8192 Jun 11 11:48 boinc_mmap_file
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas        27 Jun 11 11:48 wrapper_checkpoint.txt
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas      7721 Jun 11 11:48 heartbeat.json
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas      4548 Jun 11 11:48 pilotlog.txt
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas    713840 Jun 11 11:48 log.45006595._029508.job.log.1
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas       357 Jun 11 11:48 output.list
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas       620 Jun 11 11:48 runtime_log
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas   1126400 Jun 11 11:48 result.tar.gz
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas      8666 Jun 11 11:48 runtime_log.err
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas       654 Jun 11 11:48 cgFNDmXNeg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFajKDmjTAMKm.diag
[2025-06-11 11:48:55] -rw-r--r--. 1 boincer umatlas     21237 Jun 11 11:48 stderr.txt
[2025-06-11 11:48:55] HITS file was successfully produced:
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas 174529928 Jun 11 11:47 shared/HITS.pool.root.1
[2025-06-11 11:48:55]  *** Contents of shared directory: ***
[2025-06-11 11:48:55] total 384464
[2025-06-11 11:48:55] -rw-r--r--. 2 boincer umatlas 217494195 Jun 11 09:30 ATLAS.root_0
[2025-06-11 11:48:55] -rw-r--r--. 2 boincer umatlas     15093 Jun 11 09:30 start_atlas.sh
[2025-06-11 11:48:55] -rw-r--r--. 2 boincer umatlas    508876 Jun 11 09:30 input.tar.gz
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas 174529928 Jun 11 11:47 HITS.pool.root.1
[2025-06-11 11:48:55] -rw-------. 1 boincer umatlas   1126400 Jun 11 11:48 result.tar.gz
11:48:56 (2620825): run_atlas exited; CPU time 38128.953707
11:48:56 (2620825): called boinc_finish(0)

</stderr_txt>
]]>

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