Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:25:04 (2606476): wrapper (7.7.26015): starting
19:25:04 (2606476): wrapper: running run_atlas (--nthreads 12)
[2025-06-10 19:25:04] Arguments: --nthreads 12
[2025-06-10 19:25:04] Threads: 12
[2025-06-10 19:25:04] Checking for CVMFS
[2025-06-10 19:25:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-10 19:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-10 19:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-10 19:25:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-10 19:25:05] 2.12.6.0 5825 10636 216608 147026 2 353 29479041 40960000 8936 16776704 0 23881213 99.907 6291308 31549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-10 19:25:05] CVMFS is ok
[2025-06-10 19:25:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-10 19:25:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-10 19:25:05] Further information can be found at the LHC@home message board.
[2025-06-10 19:25:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-10 19:25:05] Checking for apptainer binary...
[2025-06-10 19:25:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-10 19:25:05] Running /usr/bin/apptainer --version
[2025-06-10 19:25:05] apptainer version 1.4.1-1.el9
[2025-06-10 19:25:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-10 19:25:05] c6-8-12-4.aglt2.org
[2025-06-10 19:25:05] apptainer works
[2025-06-10 19:25:05] Set ATHENA_PROC_NUMBER=12
[2025-06-10 19:25:05] Set ATHENA_CORE_NUMBER=12
[2025-06-10 19:25:05] Starting ATLAS job with PandaID=6677392952
[2025-06-10 19:25:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-10 21:43:40]  *** The last 200 lines of the pilot log: ***
[2025-06-10 21:43:40] 2025-06-11 01:43:14,867 | INFO     | total number of processed events: 400 (read)
[2025-06-10 21:43:40] 2025-06-11 01:43:14,885 | INFO     | executing command: lscpu
[2025-06-10 21:43:40] 2025-06-11 01:43:14,923 | INFO     | number of running child processes to parent process 2616426: 1
[2025-06-10 21:43:40] 2025-06-11 01:43:14,923 | INFO     | maximum number of monitored processes: 6
[2025-06-10 21:43:40] 2025-06-11 01:43:14,959 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-10 21:43:40] 2025-06-11 01:43:17,427 | INFO     | monitor loop #535: job 0:6677392952 is in state 'finished'
[2025-06-10 21:43:40] 2025-06-11 01:43:17,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,166 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-10 21:43:40] 2025-06-11 01:43:19,166 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677392952/memory_monitor_summary.json (trf name=prmon)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,167 | INFO     | extracted standard info from prmon json
[2025-06-10 21:43:40] 2025-06-11 01:43:19,167 | INFO     | extracted standard memory fields from prmon json
[2025-06-10 21:43:40] 2025-06-11 01:43:19,168 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-10 21:43:40] 2025-06-11 01:43:19,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-10 21:43:40] 2025-06-11 01:43:19,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-10 21:43:40] 2025-06-11 01:43:19,171 | INFO     | fitting pss+swap vs Time
[2025-06-10 21:43:40] 2025-06-11 01:43:19,171 | INFO     | sum of square deviations: 779947437.3455875
[2025-06-10 21:43:40] 2025-06-11 01:43:19,172 | INFO     | sum of deviations: -29205284539.38971
[2025-06-10 21:43:40] 2025-06-11 01:43:19,172 | INFO     | mean x: 1749602059.889706
[2025-06-10 21:43:40] 2025-06-11 01:43:19,172 | INFO     | mean y: 2426619.507352941
[2025-06-10 21:43:40] 2025-06-11 01:43:19,172 | INFO     | -- intersect: 65516618401.04959
[2025-06-10 21:43:40] 2025-06-11 01:43:19,172 | INFO     | intersect: 65516618401.04959
[2025-06-10 21:43:40] 2025-06-11 01:43:19,173 | INFO     | chi2: 2.7690979281945305
[2025-06-10 21:43:40] 2025-06-11 01:43:19,173 | INFO     | sum of square deviations: 697059721.5572535
[2025-06-10 21:43:40] 2025-06-11 01:43:19,173 | INFO     | sum of deviations: -19114007009.87787
[2025-06-10 21:43:40] 2025-06-11 01:43:19,174 | INFO     | mean x: 1749601907.40458
[2025-06-10 21:43:40] 2025-06-11 01:43:19,174 | INFO     | mean y: 2444731.1297709923
[2025-06-10 21:43:40] 2025-06-11 01:43:19,174 | INFO     | -- intersect: 47978108922.30777
[2025-06-10 21:43:40] 2025-06-11 01:43:19,174 | INFO     | intersect: 47978108922.30777
[2025-06-10 21:43:40] 2025-06-11 01:43:19,174 | INFO     | chi2: 2.1046616397702427
[2025-06-10 21:43:40] 2025-06-11 01:43:19,174 | INFO     | current chi2=2.1046616397702427 (change=23.994683671498194 %)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,174 | INFO     | right removable region: 130
[2025-06-10 21:43:40] 2025-06-11 01:43:19,174 | INFO     | sum of square deviations: 697027391.5572535
[2025-06-10 21:43:40] 2025-06-11 01:43:19,175 | INFO     | sum of deviations: -51740636268.2748
[2025-06-10 21:43:40] 2025-06-11 01:43:19,175 | INFO     | mean x: 1749602212.40458
[2025-06-10 21:43:40] 2025-06-11 01:43:19,175 | INFO     | mean y: 2467534.4580152673
[2025-06-10 21:43:40] 2025-06-11 01:43:19,175 | INFO     | -- intersect: 129876175200.3045
[2025-06-10 21:43:40] 2025-06-11 01:43:19,175 | INFO     | intersect: 129876175200.3045
[2025-06-10 21:43:40] 2025-06-11 01:43:19,176 | INFO     | chi2: 1.069266210965704
[2025-06-10 21:43:40] 2025-06-11 01:43:19,176 | INFO     | current chi2=1.069266210965704 (change=61.38575670876067 %)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,176 | INFO     | sum of square deviations: 620200483.206347
[2025-06-10 21:43:40] 2025-06-11 01:43:19,176 | INFO     | sum of deviations: -50330559297.714264
[2025-06-10 21:43:40] 2025-06-11 01:43:19,176 | INFO     | mean x: 1749602364.920635
[2025-06-10 21:43:40] 2025-06-11 01:43:19,177 | INFO     | mean y: 2464567.4285714286
[2025-06-10 21:43:40] 2025-06-11 01:43:19,177 | INFO     | -- intersect: 141986335846.93735
[2025-06-10 21:43:40] 2025-06-11 01:43:19,177 | INFO     | intersect: 141986335846.93735
[2025-06-10 21:43:40] 2025-06-11 01:43:19,177 | INFO     | chi2: 1.003735110565708
[2025-06-10 21:43:40] 2025-06-11 01:43:19,177 | INFO     | current chi2=1.003735110565708 (change=6.128604806544099 %)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,177 | INFO     | left removable region: 20
[2025-06-10 21:43:40] 2025-06-11 01:43:19,177 | INFO     | sum of square deviations: 412630167.96363544
[2025-06-10 21:43:40] 2025-06-11 01:43:19,178 | INFO     | sum of deviations: -31428053705.14545
[2025-06-10 21:43:40] 2025-06-11 01:43:19,178 | INFO     | mean x: 1749602486.9818182
[2025-06-10 21:43:40] 2025-06-11 01:43:19,178 | INFO     | mean y: 2465347.9272727272
[2025-06-10 21:43:40] 2025-06-11 01:43:19,178 | INFO     | -- intersect: 133261265098.03795
[2025-06-10 21:43:40] 2025-06-11 01:43:19,178 | INFO     | intersect: 133261265098.03795
[2025-06-10 21:43:40] 2025-06-11 01:43:19,178 | INFO     | chi2: 0.2868186210921598
[2025-06-10 21:43:40] 2025-06-11 01:43:19,178 | INFO     | -- intersect: 133261265098.03795
[2025-06-10 21:43:40] 2025-06-11 01:43:19,179 | INFO     | current memory leak: -76.17 B/s (using 110 data points, chi2=0.29)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,179 | INFO     | ..............................
[2025-06-10 21:43:40] 2025-06-11 01:43:19,179 | INFO     | . Timing measurements:
[2025-06-10 21:43:40] 2025-06-11 01:43:19,179 | INFO     | . get job = 0 s
[2025-06-10 21:43:40] 2025-06-11 01:43:19,179 | INFO     | . initial setup = 2 s
[2025-06-10 21:43:40] 2025-06-11 01:43:19,179 | INFO     | . payload setup = 5 s
[2025-06-10 21:43:40] 2025-06-11 01:43:19,179 | INFO     | . stage-in = 0 s
[2025-06-10 21:43:40] 2025-06-11 01:43:19,179 | INFO     | . payload execution = 8249 s
[2025-06-10 21:43:40] 2025-06-11 01:43:19,180 | INFO     | . stage-out = 0 s
[2025-06-10 21:43:40] 2025-06-11 01:43:19,180 | INFO     | . log creation = 0 s
[2025-06-10 21:43:40] 2025-06-11 01:43:19,180 | INFO     | ..............................
[2025-06-10 21:43:40] 2025-06-11 01:43:19,285 | INFO     | 
[2025-06-10 21:43:40] 2025-06-11 01:43:19,286 | INFO     | job summary report
[2025-06-10 21:43:40] 2025-06-11 01:43:19,286 | INFO     | --------------------------------------------------
[2025-06-10 21:43:40] 2025-06-11 01:43:19,286 | INFO     | PanDA job id: 6677392952
[2025-06-10 21:43:40] 2025-06-11 01:43:19,286 | INFO     | task id: 45006595
[2025-06-10 21:43:40] 2025-06-11 01:43:19,286 | INFO     | errors: (none)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,286 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | pilot state: finished 
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | transexitcode: 0
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | exeerrorcode: 0
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | exeerrordiag: 
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | exitcode: 0
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | exitmsg: OK
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | cpuconsumptiontime: 34883 s
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | nevents: 400
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | neventsw: 0
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | pid: 2616426
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | pgrp: 2616426
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | corecount: 12
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | event service: False
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | sizes: {0: 2397335, 6: 2397541, 11: 2397569, 8259: 2425094, 8261: 2434091, 8267: 2434233}
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | --------------------------------------------------
[2025-06-10 21:43:40] 2025-06-11 01:43:19,287 | INFO     | 
[2025-06-10 21:43:40] 2025-06-11 01:43:19,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-10 21:43:40] 2025-06-11 01:43:19,309 | INFO     | job 6677392952 has completed (purged errors)
[2025-06-10 21:43:40] 2025-06-11 01:43:19,310 | INFO     | overall cleanup function is called
[2025-06-10 21:43:40] 2025-06-11 01:43:20,318 | INFO     | --- collectZombieJob: --- 10, [2616426]
[2025-06-10 21:43:40] 2025-06-11 01:43:20,318 | INFO     | zombie collector waiting for pid 2616426
[2025-06-10 21:43:40] 2025-06-11 01:43:20,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-10 21:43:40] 2025-06-11 01:43:20,319 | INFO     | collected zombie processes
[2025-06-10 21:43:40] 2025-06-11 01:43:20,319 | INFO     | will attempt to kill all subprocesses of pid=2616426
[2025-06-10 21:43:40] 2025-06-11 01:43:20,559 | INFO     | process IDs to be killed: [2616426] (in reverse order)
[2025-06-10 21:43:40] 2025-06-11 01:43:20,646 | WARNING  | found no corresponding commands to process id(s)
[2025-06-10 21:43:40] 2025-06-11 01:43:20,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-10 21:43:40] 2025-06-11 01:43:20,656 | INFO     | did not find any defunct processes belonging to 2616426
[2025-06-10 21:43:40] 2025-06-11 01:43:20,664 | INFO     | did not find any defunct processes belonging to 2616426
[2025-06-10 21:43:40] 2025-06-11 01:43:20,664 | INFO     | ready for new job
[2025-06-10 21:43:40] 2025-06-11 01:43:20,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-10 21:43:40] 2025-06-11 01:43:20,666 | INFO     | **************************************
[2025-06-10 21:43:40] 2025-06-11 01:43:20,667 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-10 21:43:40] 2025-06-11 01:43:20,667 | INFO     | **************************************
[2025-06-10 21:43:40] 2025-06-11 01:43:20,667 | INFO     | 
[2025-06-10 21:43:40] 2025-06-11 01:43:20,682 | INFO     | architecture information:
[2025-06-10 21:43:40] 2025-06-11 01:43:20,682 | INFO     | executing command: cat /etc/os-release
[2025-06-10 21:43:40] 2025-06-11 01:43:20,698 | INFO     | cat /etc/os-release:
[2025-06-10 21:43:40] NAME="CentOS Linux"
[2025-06-10 21:43:40] VERSION="7 (Core)"
[2025-06-10 21:43:40] ID="centos"
[2025-06-10 21:43:40] ID_LIKE="rhel fedora"
[2025-06-10 21:43:40] VERSION_ID="7"
[2025-06-10 21:43:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-10 21:43:40] ANSI_COLOR="0;31"
[2025-06-10 21:43:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-10 21:43:40] HOME_URL="https://www.centos.org/"
[2025-06-10 21:43:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-10 21:43:40] 
[2025-06-10 21:43:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-10 21:43:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-10 21:43:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-10 21:43:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-10 21:43:40] 
[2025-06-10 21:43:40] 2025-06-11 01:43:20,698 | INFO     | **************************************
[2025-06-10 21:43:40] 2025-06-11 01:43:21,201 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-10 21:43:40] 2025-06-11 01:43:21,217 | INFO     | sufficient remaining disk space (56527683584 B)
[2025-06-10 21:43:40] 2025-06-11 01:43:21,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-10 21:43:40] 2025-06-11 01:43:21,218 | INFO     | current server update state: UPDATING_FINAL
[2025-06-10 21:43:40] 2025-06-11 01:43:21,218 | INFO     | update_server=False
[2025-06-10 21:43:40] 2025-06-11 01:43:21,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-10 21:43:40] 2025-06-11 01:43:21,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-10 21:43:40] 2025-06-11 01:43:21,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-10 21:43:40] 2025-06-11 01:43:21,219 | INFO     | aborting loop
[2025-06-10 21:43:40] 2025-06-11 01:43:21,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-10 21:43:40] 2025-06-11 01:43:21,471 | INFO     | all data control threads have been joined
[2025-06-10 21:43:40] 2025-06-11 01:43:21,679 | INFO     | all payload control threads have been joined
[2025-06-10 21:43:40] 2025-06-11 01:43:21,889 | INFO     | found 0 job(s) in 20 queues
[2025-06-10 21:43:40] 2025-06-11 01:43:21,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-10 21:43:40] 2025-06-11 01:43:21,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-10 21:43:40] 2025-06-11 01:43:22,185 | INFO     | all job control threads have been joined
[2025-06-10 21:43:40] 2025-06-11 01:43:22,223 | INFO     | [job] retrieve thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:22,224 | INFO     | [job] job monitor thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:22,225 | INFO     | [job] queue monitor thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:22,476 | INFO     | [data] control thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:22,580 | INFO     | [data] copytool_in thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:22,594 | INFO     | [payload] execute_payloads thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:22,684 | INFO     | [payload] control thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:23,190 | INFO     | [job] control thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:23,296 | INFO     | [data] copytool_out thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:23,420 | INFO     | [payload] validate_post thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:23,427 | INFO     | [payload] validate_pre thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:23,463 | INFO     | [job] create_data_payload thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:23,546 | INFO     | [job] validate thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:23,734 | INFO     | [payload] failed_post thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:23,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-10 21:43:40] 2025-06-11 01:43:27,875 | INFO     | [data] queue_monitor thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:31,817 | INFO     | job.realtimelogging is not enabled
[2025-06-10 21:43:40] 2025-06-11 01:43:32,822 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-10 21:43:40] 2025-06-11 01:43:34,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710522595136)>', '<ExcThread(monitor, started 140709906609920)>']
[2025-06-10 21:43:40] 2025-06-11 01:43:34,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-10 21:43:40] 2025-06-11 01:43:34,959 | INFO     | [monitor] control thread has ended
[2025-06-10 21:43:40] 2025-06-11 01:43:39,795 | INFO     | all workflow threads have been joined
[2025-06-10 21:43:40] 2025-06-11 01:43:39,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-10 21:43:40] 2025-06-11 01:43:39,796 | INFO     | traces error code: 0
[2025-06-10 21:43:40] 2025-06-11 01:43:39,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-10 21:43:40] 2025-06-11 01:43:39,957 [wrapper] ==== pilot stdout END ====
[2025-06-10 21:43:40] 2025-06-11 01:43:39,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-10 21:43:40] 2025-06-11 01:43:39,965 [wrapper] pilotpid: 2610042
[2025-06-10 21:43:40] 2025-06-11 01:43:39,968 [wrapper] Pilot exit status: 0
[2025-06-10 21:43:40] 2025-06-11 01:43:39,979 [wrapper] pandaids: 6677392952
[2025-06-10 21:43:40] 2025-06-11 01:43:40,030 [wrapper] cleanup supervisor_pilot 2843778 2610043
[2025-06-10 21:43:40] 2025-06-11 01:43:40,033 [wrapper] Test setup, not cleaning
[2025-06-10 21:43:40] 2025-06-11 01:43:40,036 [wrapper] apfmon messages muted
[2025-06-10 21:43:40] 2025-06-11 01:43:40,039 [wrapper] ==== wrapper stdout END ====
[2025-06-10 21:43:40] 2025-06-11 01:43:40,041 [wrapper] ==== wrapper stderr END ====
[2025-06-10 21:43:40]  *** Error codes and diagnostics ***
[2025-06-10 21:43:40]     "exeErrorCode": 0,
[2025-06-10 21:43:40]     "exeErrorDiag": "",
[2025-06-10 21:43:40]     "pilotErrorCode": 0,
[2025-06-10 21:43:40]     "pilotErrorDiag": "",
[2025-06-10 21:43:40]  *** Listing of results directory ***
[2025-06-10 21:43:40] total 387804
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 14:47 pilot3.tar.gz
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 14:50 queuedata.json
[2025-06-10 21:43:40] -rwx------. 1 boincer umatlas     37140 Jun  2 14:51 runpilot2-wrapper.sh
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas       100 Jun 10 19:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-10 21:43:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun 10 19:25 run_atlas
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas       105 Jun 10 19:25 job.xml
[2025-06-10 21:43:40] -rw-r--r--. 2 boincer umatlas 214045602 Jun 10 19:25 EVNT.45006593._000326.pool.root.1
[2025-06-10 21:43:40] -rw-r--r--. 2 boincer umatlas     15093 Jun 10 19:25 start_atlas.sh
[2025-06-10 21:43:40] drwxrwx--x. 2 boincer umatlas      4096 Jun 10 19:25 shared
[2025-06-10 21:43:40] -rw-r--r--. 2 boincer umatlas    508877 Jun 10 19:25 input.tar.gz
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas         0 Jun 10 19:25 boinc_lockfile
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas      2521 Jun 10 19:25 pandaJob.out
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas    976871 Jun 10 19:25 agis_schedconf.cvmfs.json
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas   1598969 Jun 10 19:25 agis_ddmendpoints.agis.ALL.json
[2025-06-10 21:43:40] drwx------. 4 boincer umatlas      4096 Jun 10 19:25 pilot3
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas      6841 Jun 10 21:37 init_data.xml
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas 177002000 Jun 10 21:42 HITS.45006595._008141.pool.root.1
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas       529 Jun 10 21:42 boinc_task_state.xml
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas        95 Jun 10 21:43 pilot_heartbeat.json
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas      1040 Jun 10 21:43 memory_monitor_summary.json
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas    399950 Jun 10 21:43 log.45006595._008141.job.log.tgz.1
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas      7719 Jun 10 21:43 heartbeat.json
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas      8192 Jun 10 21:43 boinc_mmap_file
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas        27 Jun 10 21:43 wrapper_checkpoint.txt
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas      4425 Jun 10 21:43 pilotlog.txt
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas    721821 Jun 10 21:43 log.45006595._008141.job.log.1
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas       357 Jun 10 21:43 output.list
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas       620 Jun 10 21:43 runtime_log
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas   1136640 Jun 10 21:43 result.tar.gz
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas      8666 Jun 10 21:43 runtime_log.err
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas       654 Jun 10 21:43 gPCODmNRPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR6fKDm3KqlLn.diag
[2025-06-10 21:43:40] -rw-r--r--. 1 boincer umatlas     21087 Jun 10 21:43 stderr.txt
[2025-06-10 21:43:40] HITS file was successfully produced:
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas 177002000 Jun 10 21:42 shared/HITS.pool.root.1
[2025-06-10 21:43:40]  *** Contents of shared directory: ***
[2025-06-10 21:43:40] total 383520
[2025-06-10 21:43:40] -rw-r--r--. 2 boincer umatlas 214045602 Jun 10 19:25 ATLAS.root_0
[2025-06-10 21:43:40] -rw-r--r--. 2 boincer umatlas     15093 Jun 10 19:25 start_atlas.sh
[2025-06-10 21:43:40] -rw-r--r--. 2 boincer umatlas    508877 Jun 10 19:25 input.tar.gz
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas 177002000 Jun 10 21:42 HITS.pool.root.1
[2025-06-10 21:43:40] -rw-------. 1 boincer umatlas   1136640 Jun 10 21:43 result.tar.gz
21:43:41 (2606476): run_atlas exited; CPU time 35017.484470
21:43:41 (2606476): called boinc_finish(0)

</stderr_txt>
]]>

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