Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:45 (1148035): wrapper (7.7.26015): starting
17:27:45 (1148035): wrapper: running run_atlas (--nthreads 10)
[2025-06-10 17:27:46] Arguments: --nthreads 10
[2025-06-10 17:27:46] Threads: 10
[2025-06-10 17:27:46] Checking for CVMFS
[2025-06-10 17:27:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-10 17:27:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-10 17:27:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-10 17:27:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-10 17:27:47] 2.12.6.0 3646663 100998 311672 147023 1 52 28515730 32935937 14079 16776704 1 422786433 99.624 419955669 25926 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-10 17:27:47] CVMFS is ok
[2025-06-10 17:27:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-10 17:27:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-10 17:27:47] Further information can be found at the LHC@home message board.
[2025-06-10 17:27:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-10 17:27:47] Checking for apptainer binary...
[2025-06-10 17:27:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-10 17:27:47] Running /usr/bin/apptainer --version
[2025-06-10 17:27:47] apptainer version 1.4.1-1.el9
[2025-06-10 17:27:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-10 17:27:47] c-5-2.aglt2.org
[2025-06-10 17:27:47] apptainer works
[2025-06-10 17:27:47] Set ATHENA_PROC_NUMBER=10
[2025-06-10 17:27:47] Set ATHENA_CORE_NUMBER=10
[2025-06-10 17:27:47] Starting ATLAS job with PandaID=6677386799
[2025-06-10 17:27:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-10 20:04:22]  *** The last 200 lines of the pilot log: ***
[2025-06-10 20:04:22] 2025-06-11 00:04:01,454 | INFO     | extracted standard info from prmon json
[2025-06-10 20:04:22] 2025-06-11 00:04:01,455 | INFO     | extracted standard memory fields from prmon json
[2025-06-10 20:04:22] 2025-06-11 00:04:01,455 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-10 20:04:22] 2025-06-11 00:04:01,455 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-10 20:04:22] 2025-06-11 00:04:01,455 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-10 20:04:22] 2025-06-11 00:04:01,459 | INFO     | fitting pss+swap vs Time
[2025-06-10 20:04:22] 2025-06-11 00:04:01,459 | INFO     | sum of square deviations: 1110429998.875815
[2025-06-10 20:04:22] 2025-06-11 00:04:01,460 | INFO     | sum of deviations: -20346437626.00654
[2025-06-10 20:04:22] 2025-06-11 00:04:01,461 | INFO     | mean x: 1749595574.1830065
[2025-06-10 20:04:22] 2025-06-11 00:04:01,461 | INFO     | mean y: 2289161.5359477126
[2025-06-10 20:04:22] 2025-06-11 00:04:01,461 | INFO     | -- intersect: 32060174176.251537
[2025-06-10 20:04:22] 2025-06-11 00:04:01,461 | INFO     | intersect: 32060174176.251537
[2025-06-10 20:04:22] 2025-06-11 00:04:01,461 | INFO     | chi2: 2.8274091524801257
[2025-06-10 20:04:22] 2025-06-11 00:04:01,462 | INFO     | sum of square deviations: 1005078423.7027025
[2025-06-10 20:04:22] 2025-06-11 00:04:01,462 | INFO     | sum of deviations: -10037824346.527025
[2025-06-10 20:04:22] 2025-06-11 00:04:01,463 | INFO     | mean x: 1749595421.6891892
[2025-06-10 20:04:22] 2025-06-11 00:04:01,463 | INFO     | mean y: 2303727.858108108
[2025-06-10 20:04:22] 2025-06-11 00:04:01,463 | INFO     | -- intersect: 17475697948.883347
[2025-06-10 20:04:22] 2025-06-11 00:04:01,463 | INFO     | intersect: 17475697948.883347
[2025-06-10 20:04:22] 2025-06-11 00:04:01,463 | INFO     | chi2: 2.0401450738112374
[2025-06-10 20:04:22] 2025-06-11 00:04:01,463 | INFO     | current chi2=2.0401450738112374 (change=27.84400969977486 %)
[2025-06-10 20:04:22] 2025-06-11 00:04:01,464 | INFO     | sum of square deviations: 906610698.517483
[2025-06-10 20:04:22] 2025-06-11 00:04:01,465 | INFO     | sum of deviations: -8538065202.076923
[2025-06-10 20:04:22] 2025-06-11 00:04:01,465 | INFO     | mean x: 1749595269.195804
[2025-06-10 20:04:22] 2025-06-11 00:04:01,465 | INFO     | mean y: 2306041.5384615385
[2025-06-10 20:04:22] 2025-06-11 00:04:01,465 | INFO     | -- intersect: 16479233249.728735
[2025-06-10 20:04:22] 2025-06-11 00:04:01,465 | INFO     | intersect: 16479233249.728735
[2025-06-10 20:04:22] 2025-06-11 00:04:01,465 | INFO     | chi2: 2.041067348650378
[2025-06-10 20:04:22] 2025-06-11 00:04:01,465 | INFO     | current chi2=2.041067348650378 (change=-0.045206336107142794 %)
[2025-06-10 20:04:22] 2025-06-11 00:04:01,466 | INFO     | right removable region: 142
[2025-06-10 20:04:22] 2025-06-11 00:04:01,466 | INFO     | sum of square deviations: 1005061343.7027025
[2025-06-10 20:04:22] 2025-06-11 00:04:01,467 | INFO     | sum of deviations: -43632458714.64865
[2025-06-10 20:04:22] 2025-06-11 00:04:01,467 | INFO     | mean x: 1749595726.6891892
[2025-06-10 20:04:22] 2025-06-11 00:04:01,467 | INFO     | mean y: 2322471.0945945946
[2025-06-10 20:04:22] 2025-06-11 00:04:01,468 | INFO     | -- intersect: 75957052787.2104
[2025-06-10 20:04:22] 2025-06-11 00:04:01,468 | INFO     | intersect: 75957052787.2104
[2025-06-10 20:04:22] 2025-06-11 00:04:01,468 | INFO     | chi2: 1.2406500936997882
[2025-06-10 20:04:22] 2025-06-11 00:04:01,468 | INFO     | current chi2=1.2406500936997882 (change=56.1206027570674 %)
[2025-06-10 20:04:22] 2025-06-11 00:04:01,468 | INFO     | sum of square deviations: 906585321.9020972
[2025-06-10 20:04:22] 2025-06-11 00:04:01,469 | INFO     | sum of deviations: -42704221569.33567
[2025-06-10 20:04:22] 2025-06-11 00:04:01,469 | INFO     | mean x: 1749595879.1888113
[2025-06-10 20:04:22] 2025-06-11 00:04:01,470 | INFO     | mean y: 2320902.79020979
[2025-06-10 20:04:22] 2025-06-11 00:04:01,470 | INFO     | -- intersect: 82416108415.82495
[2025-06-10 20:04:22] 2025-06-11 00:04:01,470 | INFO     | intersect: 82416108415.82495
[2025-06-10 20:04:22] 2025-06-11 00:04:01,470 | INFO     | chi2: 1.1895528079917437
[2025-06-10 20:04:22] 2025-06-11 00:04:01,470 | INFO     | current chi2=1.1895528079917437 (change=4.118589598108635 %)
[2025-06-10 20:04:22] 2025-06-11 00:04:01,470 | INFO     | left removable region: 20
[2025-06-10 20:04:22] 2025-06-11 00:04:01,471 | INFO     | sum of square deviations: 562958134.8852468
[2025-06-10 20:04:22] 2025-06-11 00:04:01,471 | INFO     | sum of deviations: -20035384935.573776
[2025-06-10 20:04:22] 2025-06-11 00:04:01,471 | INFO     | mean x: 1749595848.672131
[2025-06-10 20:04:22] 2025-06-11 00:04:01,471 | INFO     | mean y: 2321289.3606557376
[2025-06-10 20:04:22] 2025-06-11 00:04:01,472 | INFO     | -- intersect: 62269520460.34944
[2025-06-10 20:04:22] 2025-06-11 00:04:01,472 | INFO     | intersect: 62269520460.34944
[2025-06-10 20:04:22] 2025-06-11 00:04:01,472 | INFO     | chi2: 0.33143647415658944
[2025-06-10 20:04:22] 2025-06-11 00:04:01,472 | INFO     | -- intersect: 62269520460.34944
[2025-06-10 20:04:22] 2025-06-11 00:04:01,472 | INFO     | current memory leak: -35.59 B/s (using 122 data points, chi2=0.33)
[2025-06-10 20:04:22] 2025-06-11 00:04:01,473 | INFO     | ..............................
[2025-06-10 20:04:22] 2025-06-11 00:04:01,473 | INFO     | . Timing measurements:
[2025-06-10 20:04:22] 2025-06-11 00:04:01,473 | INFO     | . get job = 0 s
[2025-06-10 20:04:22] 2025-06-11 00:04:01,473 | INFO     | . initial setup = 3 s
[2025-06-10 20:04:22] 2025-06-11 00:04:01,473 | INFO     | . payload setup = 10 s
[2025-06-10 20:04:22] 2025-06-11 00:04:01,473 | INFO     | . stage-in = 0 s
[2025-06-10 20:04:22] 2025-06-11 00:04:01,474 | INFO     | . payload execution = 9302 s
[2025-06-10 20:04:22] 2025-06-11 00:04:01,474 | INFO     | . stage-out = 0 s
[2025-06-10 20:04:22] 2025-06-11 00:04:01,474 | INFO     | . log creation = 0 s
[2025-06-10 20:04:22] 2025-06-11 00:04:01,474 | INFO     | ..............................
[2025-06-10 20:04:22] 2025-06-11 00:04:01,581 | INFO     | 
[2025-06-10 20:04:22] 2025-06-11 00:04:01,581 | INFO     | job summary report
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | --------------------------------------------------
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | PanDA job id: 6677386799
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | task id: 45006595
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | errors: (none)
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | pilot state: finished 
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | transexitcode: 0
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | exeerrorcode: 0
[2025-06-10 20:04:22] 2025-06-11 00:04:01,582 | INFO     | exeerrordiag: 
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | exitcode: 0
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | exitmsg: OK
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | cpuconsumptiontime: 41662 s
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | nevents: 400
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | neventsw: 0
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | pid: 1158682
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | pgrp: 1158682
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | corecount: 10
[2025-06-10 20:04:22] 2025-06-11 00:04:01,583 | INFO     | event service: False
[2025-06-10 20:04:22] 2025-06-11 00:04:01,584 | INFO     | sizes: {0: 2397164, 1: 2397363, 2: 2397363, 12: 2397391, 15: 2397625, 23: 2397653, 9312: 2425969, 9313: 2425968, 9314: 2434965, 9317: 2435021, 9321: 2435191}
[2025-06-10 20:04:22] 2025-06-11 00:04:01,584 | INFO     | --------------------------------------------------
[2025-06-10 20:04:22] 2025-06-11 00:04:01,584 | INFO     | 
[2025-06-10 20:04:22] 2025-06-11 00:04:01,584 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-10 20:04:22] 2025-06-11 00:04:01,601 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,602 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,602 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-10 20:04:22] 2025-06-11 00:04:01,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-10 20:04:22] 2025-06-11 00:04:01,604 | INFO     | job 6677386799 has completed (purged errors)
[2025-06-10 20:04:22] 2025-06-11 00:04:01,604 | INFO     | overall cleanup function is called
[2025-06-10 20:04:22] 2025-06-11 00:04:02,612 | INFO     | --- collectZombieJob: --- 10, [1158682]
[2025-06-10 20:04:22] 2025-06-11 00:04:02,612 | INFO     | zombie collector waiting for pid 1158682
[2025-06-10 20:04:22] 2025-06-11 00:04:02,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-10 20:04:22] 2025-06-11 00:04:02,612 | INFO     | collected zombie processes
[2025-06-10 20:04:22] 2025-06-11 00:04:02,613 | INFO     | will attempt to kill all subprocesses of pid=1158682
[2025-06-10 20:04:22] 2025-06-11 00:04:02,919 | INFO     | process IDs to be killed: [1158682] (in reverse order)
[2025-06-10 20:04:22] 2025-06-11 00:04:03,013 | WARNING  | found no corresponding commands to process id(s)
[2025-06-10 20:04:22] 2025-06-11 00:04:03,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-10 20:04:22] 2025-06-11 00:04:03,027 | INFO     | did not find any defunct processes belonging to 1158682
[2025-06-10 20:04:22] 2025-06-11 00:04:03,041 | INFO     | did not find any defunct processes belonging to 1158682
[2025-06-10 20:04:22] 2025-06-11 00:04:03,042 | INFO     | ready for new job
[2025-06-10 20:04:22] 2025-06-11 00:04:03,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-10 20:04:22] 2025-06-11 00:04:03,044 | INFO     | **************************************
[2025-06-10 20:04:22] 2025-06-11 00:04:03,044 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-10 20:04:22] 2025-06-11 00:04:03,044 | INFO     | **************************************
[2025-06-10 20:04:22] 2025-06-11 00:04:03,044 | INFO     | 
[2025-06-10 20:04:22] 2025-06-11 00:04:03,059 | INFO     | architecture information:
[2025-06-10 20:04:22] 2025-06-11 00:04:03,059 | INFO     | executing command: cat /etc/os-release
[2025-06-10 20:04:22] 2025-06-11 00:04:03,074 | INFO     | cat /etc/os-release:
[2025-06-10 20:04:22] NAME="CentOS Linux"
[2025-06-10 20:04:22] VERSION="7 (Core)"
[2025-06-10 20:04:22] ID="centos"
[2025-06-10 20:04:22] ID_LIKE="rhel fedora"
[2025-06-10 20:04:22] VERSION_ID="7"
[2025-06-10 20:04:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-10 20:04:22] ANSI_COLOR="0;31"
[2025-06-10 20:04:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-10 20:04:22] HOME_URL="https://www.centos.org/"
[2025-06-10 20:04:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-10 20:04:22] 
[2025-06-10 20:04:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-10 20:04:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-10 20:04:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-10 20:04:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-10 20:04:22] 
[2025-06-10 20:04:22] 2025-06-11 00:04:03,075 | INFO     | **************************************
[2025-06-10 20:04:22] 2025-06-11 00:04:03,577 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-10 20:04:22] 2025-06-11 00:04:03,593 | INFO     | sufficient remaining disk space (76600573952 B)
[2025-06-10 20:04:22] 2025-06-11 00:04:03,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-10 20:04:22] 2025-06-11 00:04:03,594 | INFO     | current server update state: UPDATING_FINAL
[2025-06-10 20:04:22] 2025-06-11 00:04:03,594 | INFO     | update_server=False
[2025-06-10 20:04:22] 2025-06-11 00:04:03,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-10 20:04:22] 2025-06-11 00:04:03,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-10 20:04:22] 2025-06-11 00:04:03,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-10 20:04:22] 2025-06-11 00:04:03,595 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-10 20:04:22] 2025-06-11 00:04:03,595 | INFO     | aborting loop
[2025-06-10 20:04:22] 2025-06-11 00:04:03,595 | INFO     | found 0 job(s) in 20 queues
[2025-06-10 20:04:22] 2025-06-11 00:04:03,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-10 20:04:22] 2025-06-11 00:04:03,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-10 20:04:22] 2025-06-11 00:04:03,747 | INFO     | all payload control threads have been joined
[2025-06-10 20:04:22] 2025-06-11 00:04:04,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-10 20:04:22] 2025-06-11 00:04:04,495 | INFO     | all data control threads have been joined
[2025-06-10 20:04:22] 2025-06-11 00:04:04,599 | INFO     | [job] retrieve thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:04,601 | INFO     | [job] job monitor thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:04,635 | INFO     | [job] create_data_payload thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:04,752 | INFO     | [payload] control thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:05,009 | INFO     | [job] validate thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:05,144 | INFO     | all job control threads have been joined
[2025-06-10 20:04:22] 2025-06-11 00:04:05,319 | INFO     | [payload] validate_post thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:05,500 | INFO     | [data] control thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:05,504 | INFO     | [payload] execute_payloads thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:05,812 | INFO     | [payload] failed_post thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:05,934 | INFO     | [data] copytool_in thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:06,043 | INFO     | [payload] validate_pre thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:06,149 | INFO     | [job] control thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:06,486 | INFO     | [data] copytool_out thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:06,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-10 20:04:22] 2025-06-11 00:04:07,596 | INFO     | [job] queue monitor thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:07,601 | INFO     | [data] queue_monitor thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:14,185 | INFO     | job.realtimelogging is not enabled
[2025-06-10 20:04:22] 2025-06-11 00:04:15,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-10 20:04:22] 2025-06-11 00:04:17,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615938922304)>', '<ExcThread(monitor, started 140615585085184)>']
[2025-06-10 20:04:22] 2025-06-11 00:04:17,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-10 20:04:22] 2025-06-11 00:04:17,660 | INFO     | [monitor] control thread has ended
[2025-06-10 20:04:22] 2025-06-11 00:04:22,325 | INFO     | all workflow threads have been joined
[2025-06-10 20:04:22] 2025-06-11 00:04:22,325 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-10 20:04:22] 2025-06-11 00:04:22,325 | INFO     | traces error code: 0
[2025-06-10 20:04:22] 2025-06-11 00:04:22,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-10 20:04:22] 2025-06-11 00:04:22,455 [wrapper] ==== pilot stdout END ====
[2025-06-10 20:04:22] 2025-06-11 00:04:22,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-10 20:04:22] 2025-06-11 00:04:22,460 [wrapper] pilotpid: 1151694
[2025-06-10 20:04:22] 2025-06-11 00:04:22,462 [wrapper] Pilot exit status: 0
[2025-06-10 20:04:22] 2025-06-11 00:04:22,471 [wrapper] pandaids: 6677386799
[2025-06-10 20:04:22] 2025-06-11 00:04:22,537 [wrapper] cleanup supervisor_pilot 1551789 1151695
[2025-06-10 20:04:22] 2025-06-11 00:04:22,540 [wrapper] Test setup, not cleaning
[2025-06-10 20:04:22] 2025-06-11 00:04:22,542 [wrapper] apfmon messages muted
[2025-06-10 20:04:22] 2025-06-11 00:04:22,545 [wrapper] ==== wrapper stdout END ====
[2025-06-10 20:04:22] 2025-06-11 00:04:22,547 [wrapper] ==== wrapper stderr END ====
[2025-06-10 20:04:22]  *** Error codes and diagnostics ***
[2025-06-10 20:04:22]     "exeErrorCode": 0,
[2025-06-10 20:04:22]     "exeErrorDiag": "",
[2025-06-10 20:04:22]     "pilotErrorCode": 0,
[2025-06-10 20:04:22]     "pilotErrorDiag": "",
[2025-06-10 20:04:22]  *** Listing of results directory ***
[2025-06-10 20:04:22] total 384160
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 13:18 queuedata.json
[2025-06-10 20:04:22] -rwx------. 1 boincer umatlas     37140 Jun  2 13:18 runpilot2-wrapper.sh
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 13:18 pilot3.tar.gz
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas       100 Jun 10 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-10 20:04:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jun 10 17:27 run_atlas
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas       105 Jun 10 17:27 job.xml
[2025-06-10 20:04:22] -rw-r--r--. 2 boincer umatlas 214323836 Jun 10 17:27 EVNT.45006593._000210.pool.root.1
[2025-06-10 20:04:22] -rw-r--r--. 2 boincer umatlas     15093 Jun 10 17:27 start_atlas.sh
[2025-06-10 20:04:22] drwxrwx--x. 2 boincer umatlas      4096 Jun 10 17:27 shared
[2025-06-10 20:04:22] -rw-r--r--. 2 boincer umatlas    508876 Jun 10 17:27 input.tar.gz
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas         0 Jun 10 17:27 boinc_lockfile
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas      2521 Jun 10 17:27 pandaJob.out
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas    976883 Jun 10 17:28 agis_schedconf.cvmfs.json
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas   1598969 Jun 10 17:28 agis_ddmendpoints.agis.ALL.json
[2025-06-10 20:04:22] drwx------. 4 boincer umatlas      4096 Jun 10 17:28 pilot3
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas 172814580 Jun 10 20:03 HITS.45006595._005241.pool.root.1
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas       529 Jun 10 20:03 boinc_task_state.xml
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas        95 Jun 10 20:03 pilot_heartbeat.json
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas      1051 Jun 10 20:03 memory_monitor_summary.json
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas    383221 Jun 10 20:03 log.45006595._005241.job.log.tgz.1
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas      7731 Jun 10 20:04 heartbeat.json
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas      6671 Jun 10 20:04 init_data.xml
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas      8192 Jun 10 20:04 boinc_mmap_file
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas        27 Jun 10 20:04 wrapper_checkpoint.txt
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas      4548 Jun 10 20:04 pilotlog.txt
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas    826912 Jun 10 20:04 log.45006595._005241.job.log.1
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas       357 Jun 10 20:04 output.list
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas       620 Jun 10 20:04 runtime_log
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas   1228800 Jun 10 20:04 result.tar.gz
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas      8646 Jun 10 20:04 runtime_log.err
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas       653 Jun 10 20:04 PkkKDmzyNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAwVKDm6CgrFm.diag
[2025-06-10 20:04:22] -rw-r--r--. 1 boincer umatlas     20921 Jun 10 20:04 stderr.txt
[2025-06-10 20:04:22] HITS file was successfully produced:
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas 172814580 Jun 10 20:03 shared/HITS.pool.root.1
[2025-06-10 20:04:22]  *** Contents of shared directory: ***
[2025-06-10 20:04:22] total 379792
[2025-06-10 20:04:22] -rw-r--r--. 2 boincer umatlas 214323836 Jun 10 17:27 ATLAS.root_0
[2025-06-10 20:04:22] -rw-r--r--. 2 boincer umatlas     15093 Jun 10 17:27 start_atlas.sh
[2025-06-10 20:04:22] -rw-r--r--. 2 boincer umatlas    508876 Jun 10 17:27 input.tar.gz
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas 172814580 Jun 10 20:03 HITS.pool.root.1
[2025-06-10 20:04:22] -rw-------. 1 boincer umatlas   1228800 Jun 10 20:04 result.tar.gz
20:04:24 (1148035): run_atlas exited; CPU time 41893.305328
20:04:24 (1148035): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN