Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:24:34 (1748311): wrapper (7.7.26015): starting
12:24:34 (1748311): wrapper: running run_atlas (--nthreads 10)
[2025-06-10 12:24:34] Arguments: --nthreads 10
[2025-06-10 12:24:34] Threads: 10
[2025-06-10 12:24:34] Checking for CVMFS
[2025-06-10 12:24:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-10 12:24:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-10 12:24:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-10 12:24:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-10 12:24:35] 2.12.6.0 2656583 44946 330692 147016 3 366 26995905 32935936 11051 16776704 0 164029041 99.699 158059349 30590 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-10 12:24:35] CVMFS is ok
[2025-06-10 12:24:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-10 12:24:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-10 12:24:35] Further information can be found at the LHC@home message board.
[2025-06-10 12:24:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-10 12:24:35] Checking for apptainer binary...
[2025-06-10 12:24:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-10 12:24:35] Running /usr/bin/apptainer --version
[2025-06-10 12:24:35] apptainer version 1.4.1-1.el9
[2025-06-10 12:24:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-10 12:24:35] c-4-39.aglt2.org
[2025-06-10 12:24:35] apptainer works
[2025-06-10 12:24:35] Set ATHENA_PROC_NUMBER=10
[2025-06-10 12:24:35] Set ATHENA_CORE_NUMBER=10
[2025-06-10 12:24:35] Starting ATLAS job with PandaID=6677637368
[2025-06-10 12:24:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-10 15:27:09]  *** The last 200 lines of the pilot log: ***
[2025-06-10 15:27:09] 2025-06-10 19:26:51,991 | WARNING  | process 1758986 can no longer be monitored (due to stat problems) - aborting
[2025-06-10 15:27:09] 2025-06-10 19:26:51,992 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677637368/memory_monitor_summary.json (trf name=prmon)
[2025-06-10 15:27:09] 2025-06-10 19:26:52,461 | INFO     | number of running child processes to parent process 1758986: 1
[2025-06-10 15:27:09] 2025-06-10 19:26:52,461 | INFO     | maximum number of monitored processes: 6
[2025-06-10 15:27:09] 2025-06-10 19:26:54,974 | INFO     | monitor loop #727: job 0:6677637368 is in state 'finished'
[2025-06-10 15:27:09] 2025-06-10 19:26:54,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-10 15:27:09] 2025-06-10 19:26:55,984 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-10 15:27:09] 2025-06-10 19:26:55,986 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677637368/memory_monitor_summary.json (trf name=prmon)
[2025-06-10 15:27:09] 2025-06-10 19:26:55,986 | INFO     | extracted standard info from prmon json
[2025-06-10 15:27:09] 2025-06-10 19:26:55,987 | INFO     | extracted standard memory fields from prmon json
[2025-06-10 15:27:09] 2025-06-10 19:26:55,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-10 15:27:09] 2025-06-10 19:26:55,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-10 15:27:09] 2025-06-10 19:26:55,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-10 15:27:09] 2025-06-10 19:26:55,992 | INFO     | fitting pss+swap vs Time
[2025-06-10 15:27:09] 2025-06-10 19:26:55,992 | INFO     | sum of square deviations: 1778276558.1452522
[2025-06-10 15:27:09] 2025-06-10 19:26:55,994 | INFO     | sum of deviations: -29399762090.94973
[2025-06-10 15:27:09] 2025-06-10 19:26:55,994 | INFO     | mean x: 1749578140.2346368
[2025-06-10 15:27:09] 2025-06-10 19:26:55,994 | INFO     | mean y: 2282822.9273743015
[2025-06-10 15:27:09] 2025-06-10 19:26:55,994 | INFO     | -- intersect: 28927581785.46543
[2025-06-10 15:27:09] 2025-06-10 19:26:55,994 | INFO     | intersect: 28927581785.46543
[2025-06-10 15:27:09] 2025-06-10 19:26:55,995 | INFO     | chi2: 1.895502938493517
[2025-06-10 15:27:09] 2025-06-10 19:26:55,995 | INFO     | sum of square deviations: 1633384325.362065
[2025-06-10 15:27:09] 2025-06-10 19:26:55,996 | INFO     | sum of deviations: -26401507186.241383
[2025-06-10 15:27:09] 2025-06-10 19:26:55,996 | INFO     | mean x: 1749577987.7413793
[2025-06-10 15:27:09] 2025-06-10 19:26:55,996 | INFO     | mean y: 2285993.83908046
[2025-06-10 15:27:09] 2025-06-10 19:26:55,997 | INFO     | -- intersect: 28281910757.59742
[2025-06-10 15:27:09] 2025-06-10 19:26:55,997 | INFO     | intersect: 28281910757.59742
[2025-06-10 15:27:09] 2025-06-10 19:26:55,997 | INFO     | chi2: 1.8887909737450994
[2025-06-10 15:27:09] 2025-06-10 19:26:55,997 | INFO     | current chi2=1.8887909737450994 (change=0.3540994114075052 %)
[2025-06-10 15:27:09] 2025-06-10 19:26:55,997 | INFO     | right removable region: 173
[2025-06-10 15:27:09] 2025-06-10 19:26:55,998 | INFO     | sum of square deviations: 1633358705.362065
[2025-06-10 15:27:09] 2025-06-10 19:26:55,999 | INFO     | sum of deviations: -55256801088.65516
[2025-06-10 15:27:09] 2025-06-10 19:26:55,999 | INFO     | mean x: 1749578292.7413793
[2025-06-10 15:27:09] 2025-06-10 19:26:55,999 | INFO     | mean y: 2309744.563218391
[2025-06-10 15:27:09] 2025-06-10 19:26:55,999 | INFO     | -- intersect: 59190839118.83142
[2025-06-10 15:27:09] 2025-06-10 19:26:56,000 | INFO     | intersect: 59190839118.83142
[2025-06-10 15:27:09] 2025-06-10 19:26:56,000 | INFO     | chi2: 0.37724428573304836
[2025-06-10 15:27:09] 2025-06-10 19:26:56,000 | INFO     | current chi2=0.37724428573304836 (change=80.09793189596057 %)
[2025-06-10 15:27:09] 2025-06-10 19:26:56,000 | INFO     | sum of square deviations: 1496534027.5621269
[2025-06-10 15:27:09] 2025-06-10 19:26:56,001 | INFO     | sum of deviations: -52861390095.568
[2025-06-10 15:27:09] 2025-06-10 19:26:56,002 | INFO     | mean x: 1749578445.2485206
[2025-06-10 15:27:09] 2025-06-10 19:26:56,002 | INFO     | mean y: 2307024.727810651
[2025-06-10 15:27:09] 2025-06-10 19:26:56,002 | INFO     | -- intersect: 61801869877.12676
[2025-06-10 15:27:09] 2025-06-10 19:26:56,002 | INFO     | intersect: 61801869877.12676
[2025-06-10 15:27:09] 2025-06-10 19:26:56,002 | INFO     | chi2: 0.3506515997598125
[2025-06-10 15:27:09] 2025-06-10 19:26:56,002 | INFO     | current chi2=0.3506515997598125 (change=7.049195171124148 %)
[2025-06-10 15:27:09] 2025-06-10 19:26:56,002 | INFO     | left removable region: 20
[2025-06-10 15:27:09] 2025-06-10 19:26:56,003 | INFO     | sum of square deviations: 1110453066.0522888
[2025-06-10 15:27:09] 2025-06-10 19:26:56,004 | INFO     | sum of deviations: -36705510343.73202
[2025-06-10 15:27:09] 2025-06-10 19:26:56,004 | INFO     | mean x: 1749578567.24183
[2025-06-10 15:27:09] 2025-06-10 19:26:56,004 | INFO     | mean y: 2295988.614379085
[2025-06-10 15:27:09] 2025-06-10 19:26:56,004 | INFO     | -- intersect: 57833802929.62264
[2025-06-10 15:27:09] 2025-06-10 19:26:56,004 | INFO     | intersect: 57833802929.62264
[2025-06-10 15:27:09] 2025-06-10 19:26:56,004 | INFO     | chi2: 0.3257973873109741
[2025-06-10 15:27:09] 2025-06-10 19:26:56,005 | INFO     | -- intersect: 57833802929.62264
[2025-06-10 15:27:09] 2025-06-10 19:26:56,005 | INFO     | current memory leak: -33.05 B/s (using 153 data points, chi2=0.33)
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | ..............................
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | . Timing measurements:
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | . get job = 0 s
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | . initial setup = 2 s
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | . payload setup = 6 s
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | . stage-in = 0 s
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | . payload execution = 10894 s
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | . stage-out = 3 s
[2025-06-10 15:27:09] 2025-06-10 19:26:56,006 | INFO     | . log creation = 0 s
[2025-06-10 15:27:09] 2025-06-10 19:26:56,007 | INFO     | ..............................
[2025-06-10 15:27:09] 2025-06-10 19:26:56,222 | INFO     | 
[2025-06-10 15:27:09] 2025-06-10 19:26:56,230 | INFO     | job summary report
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | --------------------------------------------------
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | PanDA job id: 6677637368
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | task id: 45006595
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | errors: (none)
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | pilot state: finished 
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | transexitcode: 0
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | exeerrorcode: 0
[2025-06-10 15:27:09] 2025-06-10 19:26:56,231 | INFO     | exeerrordiag: 
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | exitcode: 0
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | exitmsg: OK
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | cpuconsumptiontime: 43620 s
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | nevents: 400
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | neventsw: 0
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | pid: 1758986
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | pgrp: 1758986
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | corecount: 10
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | event service: False
[2025-06-10 15:27:09] 2025-06-10 19:26:56,232 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 10904: 2426547, 10908: 2435544, 10915: 2435658}
[2025-06-10 15:27:09] 2025-06-10 19:26:56,233 | INFO     | --------------------------------------------------
[2025-06-10 15:27:09] 2025-06-10 19:26:56,233 | INFO     | 
[2025-06-10 15:27:09] 2025-06-10 19:26:56,233 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-10 15:27:09] 2025-06-10 19:26:56,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-10 15:27:09] 2025-06-10 19:26:56,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-10 15:27:09] 2025-06-10 19:26:56,254 | INFO     | job 6677637368 has completed (purged errors)
[2025-06-10 15:27:09] 2025-06-10 19:26:56,255 | INFO     | overall cleanup function is called
[2025-06-10 15:27:09] 2025-06-10 19:26:56,343 | INFO     | PID=1752451 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-10 15:27:09] 2025-06-10 19:26:56,343 | INFO     | .. there are 14 such processes running
[2025-06-10 15:27:09] 2025-06-10 19:26:57,267 | INFO     | --- collectZombieJob: --- 10, [1758986]
[2025-06-10 15:27:09] 2025-06-10 19:26:57,268 | INFO     | zombie collector waiting for pid 1758986
[2025-06-10 15:27:09] 2025-06-10 19:26:57,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-10 15:27:09] 2025-06-10 19:26:57,268 | INFO     | collected zombie processes
[2025-06-10 15:27:09] 2025-06-10 19:26:57,268 | INFO     | will attempt to kill all subprocesses of pid=1758986
[2025-06-10 15:27:09] 2025-06-10 19:26:57,658 | INFO     | process IDs to be killed: [1758986] (in reverse order)
[2025-06-10 15:27:09] 2025-06-10 19:26:57,766 | WARNING  | found no corresponding commands to process id(s)
[2025-06-10 15:27:09] 2025-06-10 19:26:57,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-10 15:27:09] 2025-06-10 19:26:57,775 | INFO     | did not find any defunct processes belonging to 1758986
[2025-06-10 15:27:09] 2025-06-10 19:26:57,784 | INFO     | did not find any defunct processes belonging to 1758986
[2025-06-10 15:27:09] 2025-06-10 19:26:57,784 | INFO     | ready for new job
[2025-06-10 15:27:09] 2025-06-10 19:26:57,784 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-10 15:27:09] 2025-06-10 19:26:57,786 | INFO     | **************************************
[2025-06-10 15:27:09] 2025-06-10 19:26:57,786 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-10 15:27:09] 2025-06-10 19:26:57,786 | INFO     | **************************************
[2025-06-10 15:27:09] 2025-06-10 19:26:57,786 | INFO     | 
[2025-06-10 15:27:09] 2025-06-10 19:26:57,801 | INFO     | architecture information:
[2025-06-10 15:27:09] 2025-06-10 19:26:57,801 | INFO     | executing command: cat /etc/os-release
[2025-06-10 15:27:09] 2025-06-10 19:26:57,811 | INFO     | cat /etc/os-release:
[2025-06-10 15:27:09] NAME="CentOS Linux"
[2025-06-10 15:27:09] VERSION="7 (Core)"
[2025-06-10 15:27:09] ID="centos"
[2025-06-10 15:27:09] ID_LIKE="rhel fedora"
[2025-06-10 15:27:09] VERSION_ID="7"
[2025-06-10 15:27:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-10 15:27:09] ANSI_COLOR="0;31"
[2025-06-10 15:27:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-10 15:27:09] HOME_URL="https://www.centos.org/"
[2025-06-10 15:27:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-10 15:27:09] 
[2025-06-10 15:27:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-10 15:27:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-10 15:27:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-10 15:27:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-10 15:27:09] 
[2025-06-10 15:27:09] 2025-06-10 19:26:57,811 | INFO     | **************************************
[2025-06-10 15:27:09] 2025-06-10 19:26:58,315 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-10 15:27:09] 2025-06-10 19:26:58,333 | INFO     | sufficient remaining disk space (76597428224 B)
[2025-06-10 15:27:09] 2025-06-10 19:26:58,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-10 15:27:09] 2025-06-10 19:26:58,334 | INFO     | current server update state: UPDATING_FINAL
[2025-06-10 15:27:09] 2025-06-10 19:26:58,334 | INFO     | update_server=False
[2025-06-10 15:27:09] 2025-06-10 19:26:58,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-10 15:27:09] 2025-06-10 19:26:58,361 | INFO     | found 0 job(s) in 20 queues
[2025-06-10 15:27:09] 2025-06-10 19:26:58,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-10 15:27:09] 2025-06-10 19:26:58,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-10 15:27:09] 2025-06-10 19:26:58,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-10 15:27:09] 2025-06-10 19:26:58,503 | INFO     | aborting loop
[2025-06-10 15:27:09] 2025-06-10 19:26:58,743 | INFO     | all job control threads have been joined
[2025-06-10 15:27:09] 2025-06-10 19:26:58,924 | INFO     | all data control threads have been joined
[2025-06-10 15:27:09] 2025-06-10 19:26:58,971 | INFO     | all payload control threads have been joined
[2025-06-10 15:27:09] 2025-06-10 19:26:59,340 | INFO     | [job] retrieve thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,359 | INFO     | [payload] validate_post thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,508 | INFO     | [job] job monitor thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,675 | INFO     | [job] create_data_payload thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,713 | INFO     | [data] copytool_in thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,749 | INFO     | [job] control thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-10 15:27:09] 2025-06-10 19:26:59,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-10 15:27:09] 2025-06-10 19:26:59,925 | INFO     | [payload] failed_post thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,930 | INFO     | [data] control thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,960 | INFO     | [payload] validate_pre thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,967 | INFO     | [payload] execute_payloads thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:26:59,977 | INFO     | [payload] control thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:27:00,684 | INFO     | [job] validate thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:27:01,191 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-10 15:27:09] 2025-06-10 19:27:01,787 | INFO     | [data] copytool_out thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:27:02,197 | INFO     | [job] queue monitor thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:27:03,898 | INFO     | [data] queue_monitor thread has finished
[2025-06-10 15:27:09] 2025-06-10 19:27:04,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990976821056)>', '<ExcThread(monitor, started 139990340192000)>']
[2025-06-10 15:27:09] 2025-06-10 19:27:05,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-10 15:27:09] 2025-06-10 19:27:05,402 | INFO     | [monitor] control thread has ended
[2025-06-10 15:27:09] 2025-06-10 19:27:09,619 | INFO     | all workflow threads have been joined
[2025-06-10 15:27:09] 2025-06-10 19:27:09,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-10 15:27:09] 2025-06-10 19:27:09,620 | INFO     | traces error code: 0
[2025-06-10 15:27:09] 2025-06-10 19:27:09,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-10 15:27:09] 2025-06-10 19:27:09,830 [wrapper] ==== pilot stdout END ====
[2025-06-10 15:27:09] 2025-06-10 19:27:09,833 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-10 15:27:09] 2025-06-10 19:27:09,835 [wrapper] pilotpid: 1752451
[2025-06-10 15:27:09] 2025-06-10 19:27:09,837 [wrapper] Pilot exit status: 0
[2025-06-10 15:27:09] 2025-06-10 19:27:09,850 [wrapper] pandaids: 6677637368
[2025-06-10 15:27:09] 2025-06-10 19:27:09,915 [wrapper] cleanup supervisor_pilot 2789758 1752452
[2025-06-10 15:27:09] 2025-06-10 19:27:09,918 [wrapper] Test setup, not cleaning
[2025-06-10 15:27:09] 2025-06-10 19:27:09,921 [wrapper] apfmon messages muted
[2025-06-10 15:27:09] 2025-06-10 19:27:09,924 [wrapper] ==== wrapper stdout END ====
[2025-06-10 15:27:09] 2025-06-10 19:27:09,926 [wrapper] ==== wrapper stderr END ====
[2025-06-10 15:27:09]  *** Error codes and diagnostics ***
[2025-06-10 15:27:09]     "exeErrorCode": 0,
[2025-06-10 15:27:09]     "exeErrorDiag": "",
[2025-06-10 15:27:09]     "pilotErrorCode": 0,
[2025-06-10 15:27:09]     "pilotErrorDiag": "",
[2025-06-10 15:27:09]  *** Listing of results directory ***
[2025-06-10 15:27:10] total 389652
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:51 queuedata.json
[2025-06-10 15:27:10] -rwx------. 1 boincer umatlas     37140 Jun  3 09:51 runpilot2-wrapper.sh
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas       100 Jun 10 12:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-10 15:27:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun 10 12:24 run_atlas
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas       105 Jun 10 12:24 job.xml
[2025-06-10 15:27:10] -rw-r--r--. 2 boincer umatlas 213506127 Jun 10 12:24 EVNT.45006593._001394.pool.root.1
[2025-06-10 15:27:10] -rw-r--r--. 2 boincer umatlas     15093 Jun 10 12:24 start_atlas.sh
[2025-06-10 15:27:10] drwxrwx--x. 2 boincer umatlas      4096 Jun 10 12:24 shared
[2025-06-10 15:27:10] -rw-r--r--. 2 boincer umatlas    508883 Jun 10 12:24 input.tar.gz
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas         0 Jun 10 12:24 boinc_lockfile
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas      2525 Jun 10 12:24 pandaJob.out
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas    976041 Jun 10 12:24 agis_schedconf.cvmfs.json
[2025-06-10 15:27:10] drwx------. 4 boincer umatlas      4096 Jun 10 12:24 pilot3
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas      6673 Jun 10 15:19 init_data.xml
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas 178975719 Jun 10 15:26 HITS.45006595._034663.pool.root.1
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas       531 Jun 10 15:26 boinc_task_state.xml
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas        95 Jun 10 15:26 pilot_heartbeat.json
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas      1044 Jun 10 15:26 memory_monitor_summary.json
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas   1598969 Jun 10 15:26 agis_ddmendpoints.agis.ALL.json
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas    392130 Jun 10 15:26 log.45006595._034663.job.log.tgz.1
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas      7725 Jun 10 15:26 heartbeat.json
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas      8192 Jun 10 15:27 boinc_mmap_file
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas        28 Jun 10 15:27 wrapper_checkpoint.txt
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas      4353 Jun 10 15:27 pilotlog.txt
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas    957662 Jun 10 15:27 log.45006595._034663.job.log.1
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas       357 Jun 10 15:27 output.list
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas       620 Jun 10 15:27 runtime_log
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas   1372160 Jun 10 15:27 result.tar.gz
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas      8652 Jun 10 15:27 runtime_log.err
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas       657 Jun 10 15:27 H0JODmOEhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTSkKDmUE8rwm.diag
[2025-06-10 15:27:10] -rw-r--r--. 1 boincer umatlas     21211 Jun 10 15:27 stderr.txt
[2025-06-10 15:27:10] HITS file was successfully produced:
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas 178975719 Jun 10 15:26 shared/HITS.pool.root.1
[2025-06-10 15:27:10]  *** Contents of shared directory: ***
[2025-06-10 15:27:10] total 385148
[2025-06-10 15:27:10] -rw-r--r--. 2 boincer umatlas 213506127 Jun 10 12:24 ATLAS.root_0
[2025-06-10 15:27:10] -rw-r--r--. 2 boincer umatlas     15093 Jun 10 12:24 start_atlas.sh
[2025-06-10 15:27:10] -rw-r--r--. 2 boincer umatlas    508883 Jun 10 12:24 input.tar.gz
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas 178975719 Jun 10 15:26 HITS.pool.root.1
[2025-06-10 15:27:10] -rw-------. 1 boincer umatlas   1372160 Jun 10 15:27 result.tar.gz
15:27:11 (1748311): run_atlas exited; CPU time 43852.486108
15:27:11 (1748311): called boinc_finish(0)

</stderr_txt>
]]>

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