Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:45:51 (26218): wrapper (7.7.26015): starting
14:45:51 (26218): wrapper: running run_atlas (--nthreads 8)
[2025-06-09 14:45:51] Arguments: --nthreads 8
[2025-06-09 14:45:51] Threads: 8
[2025-06-09 14:45:51] Checking for CVMFS
[2025-06-09 14:45:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-09 14:45:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-09 14:45:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-09 14:45:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-09 14:45:53] 2.11.2.0 20806 40413 78860 146969 3 107 16337536 25165824 4295 130560 0 19824687 99.769 26950641 2755 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-09 14:45:53] CVMFS is ok
[2025-06-09 14:45:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-09 14:45:53] Checking for apptainer binary...
[2025-06-09 14:45:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-09 14:45:53] Running /usr/bin/apptainer --version
[2025-06-09 14:45:54] apptainer version 1.3.2-1.el7
[2025-06-09 14:45:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-09 14:46:45] cg-vwn334.simple-grid.lan
[2025-06-09 14:46:45] apptainer works
[2025-06-09 14:46:45] Set ATHENA_PROC_NUMBER=8
[2025-06-09 14:46:45] Set ATHENA_CORE_NUMBER=8
[2025-06-09 14:46:45] Starting ATLAS job with PandaID=6668044621
[2025-06-09 14:46:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-09 19:46:53]  *** The last 200 lines of the pilot log: ***
[2025-06-09 19:46:53] 2025-06-09 17:45:04,974 | INFO     | monitor loop #1239: job 0:6668044621 is in state 'finished'
[2025-06-09 19:46:53] 2025-06-09 17:45:04,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-09 19:46:53] 2025-06-09 17:45:07,480 | INFO     | monitor loop #1240: job 0:6668044621 is in state 'finished'
[2025-06-09 19:46:53] 2025-06-09 17:45:07,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-09 19:46:53] 2025-06-09 17:45:08,545 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-09 19:46:53] 2025-06-09 17:45:08,546 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6668044621/memory_monitor_summary.json (trf name=prmon)
[2025-06-09 19:46:53] 2025-06-09 17:45:08,547 | INFO     | extracted standard info from prmon json
[2025-06-09 19:46:53] 2025-06-09 17:45:08,547 | INFO     | extracted standard memory fields from prmon json
[2025-06-09 19:46:53] 2025-06-09 17:45:08,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-09 19:46:53] 2025-06-09 17:45:08,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-09 19:46:53] 2025-06-09 17:45:08,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-09 19:46:53] 2025-06-09 17:45:08,555 | INFO     | fitting pss+swap vs Time
[2025-06-09 19:46:53] 2025-06-09 17:45:08,556 | INFO     | sum of square deviations: 7641036290.0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,558 | INFO     | sum of deviations: 11146181263.000015
[2025-06-09 19:46:53] 2025-06-09 17:45:08,559 | INFO     | mean x: 1749482143.0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,559 | INFO     | mean y: 2489189.8109965636
[2025-06-09 19:46:53] 2025-06-09 17:45:08,559 | INFO     | -- intersect: -2549526576.398604
[2025-06-09 19:46:53] 2025-06-09 17:45:08,559 | INFO     | intersect: -2549526576.398604
[2025-06-09 19:46:53] 2025-06-09 17:45:08,560 | INFO     | chi2: 3.0563656782080466
[2025-06-09 19:46:53] 2025-06-09 17:45:08,560 | INFO     | sum of square deviations: 7253894147.5
[2025-06-09 19:46:53] 2025-06-09 17:45:08,564 | INFO     | sum of deviations: 30035316182.499996
[2025-06-09 19:46:53] 2025-06-09 17:45:08,564 | INFO     | mean x: 1749481990.5
[2025-06-09 19:46:53] 2025-06-09 17:45:08,564 | INFO     | mean y: 2496524.7657342656
[2025-06-09 19:46:53] 2025-06-09 17:45:08,564 | INFO     | -- intersect: -7241370517.099857
[2025-06-09 19:46:53] 2025-06-09 17:45:08,565 | INFO     | intersect: -7241370517.099857
[2025-06-09 19:46:53] 2025-06-09 17:45:08,565 | INFO     | chi2: 2.2974846989419584
[2025-06-09 19:46:53] 2025-06-09 17:45:08,565 | INFO     | current chi2=2.2974846989419584 (change=24.82952169882439 %)
[2025-06-09 19:46:53] 2025-06-09 17:45:08,565 | INFO     | right removable region: 285
[2025-06-09 19:46:53] 2025-06-09 17:45:08,566 | INFO     | sum of square deviations: 7253894147.5
[2025-06-09 19:46:53] 2025-06-09 17:45:08,568 | INFO     | sum of deviations: -49203736704.5
[2025-06-09 19:46:53] 2025-06-09 17:45:08,568 | INFO     | mean x: 1749482295.5
[2025-06-09 19:46:53] 2025-06-09 17:45:08,568 | INFO     | mean y: 2512829.227272727
[2025-06-09 19:46:53] 2025-06-09 17:45:08,568 | INFO     | -- intersect: 11869389362.93482
[2025-06-09 19:46:53] 2025-06-09 17:45:08,568 | INFO     | intersect: 11869389362.93482
[2025-06-09 19:46:53] 2025-06-09 17:45:08,569 | INFO     | chi2: 0.970987475748439
[2025-06-09 19:46:53] 2025-06-09 17:45:08,569 | INFO     | current chi2=0.970987475748439 (change=68.2306511072415 %)
[2025-06-09 19:46:53] 2025-06-09 17:45:08,569 | INFO     | sum of square deviations: 6880054580.0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,572 | INFO     | sum of deviations: -48270660727.00001
[2025-06-09 19:46:53] 2025-06-09 17:45:08,572 | INFO     | mean x: 1749482448.0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,572 | INFO     | mean y: 2512417.355871886
[2025-06-09 19:46:53] 2025-06-09 17:45:08,573 | INFO     | -- intersect: 12276931568.148338
[2025-06-09 19:46:53] 2025-06-09 17:45:08,573 | INFO     | intersect: 12276931568.148338
[2025-06-09 19:46:53] 2025-06-09 17:45:08,573 | INFO     | chi2: 0.9436919838775256
[2025-06-09 19:46:53] 2025-06-09 17:45:08,573 | INFO     | current chi2=0.9436919838775256 (change=2.811106482076299 %)
[2025-06-09 19:46:53] 2025-06-09 17:45:08,573 | INFO     | left removable region: 20
[2025-06-09 19:46:53] 2025-06-09 17:45:08,574 | INFO     | sum of square deviations: 5770452380.0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,576 | INFO     | sum of deviations: -10215625958.0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,576 | INFO     | mean x: 1749482570.0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,576 | INFO     | mean y: 2512027.5358490567
[2025-06-09 19:46:53] 2025-06-09 17:45:08,577 | INFO     | -- intersect: 3099679871.2743936
[2025-06-09 19:46:53] 2025-06-09 17:45:08,577 | INFO     | intersect: 3099679871.2743936
[2025-06-09 19:46:53] 2025-06-09 17:45:08,577 | INFO     | chi2: 0.10018224899460855
[2025-06-09 19:46:53] 2025-06-09 17:45:08,577 | INFO     | -- intersect: 3099679871.2743936
[2025-06-09 19:46:53] 2025-06-09 17:45:08,577 | INFO     | current memory leak: -1.77 B/s (using 265 data points, chi2=0.10)
[2025-06-09 19:46:53] 2025-06-09 17:45:08,578 | INFO     | ..............................
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | . Timing measurements:
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | . get job = 0 s
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | . initial setup = 2 s
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | . payload setup = 23 s
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | . stage-in = 0 s
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | . payload execution = 17731 s
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | . stage-out = 4 s
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | . log creation = 1 s
[2025-06-09 19:46:53] 2025-06-09 17:45:08,579 | INFO     | ..............................
[2025-06-09 19:46:53] 2025-06-09 17:45:08,719 | INFO     | 
[2025-06-09 19:46:53] 2025-06-09 17:45:08,719 | INFO     | job summary report
[2025-06-09 19:46:53] 2025-06-09 17:45:08,719 | INFO     | --------------------------------------------------
[2025-06-09 19:46:53] 2025-06-09 17:45:08,719 | INFO     | PanDA job id: 6668044621
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | task id: 44871837
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | errors: (none)
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | pilot state: finished 
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | transexitcode: 0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | exeerrorcode: 0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | exeerrordiag: 
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | exitcode: 0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | exitmsg: OK
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | cpuconsumptiontime: 66268 s
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | nevents: 400
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | neventsw: 0
[2025-06-09 19:46:53] 2025-06-09 17:45:08,720 | INFO     | pid: 4441
[2025-06-09 19:46:53] 2025-06-09 17:45:08,721 | INFO     | pgrp: 4441
[2025-06-09 19:46:53] 2025-06-09 17:45:08,721 | INFO     | corecount: 8
[2025-06-09 19:46:53] 2025-06-09 17:45:08,721 | INFO     | event service: False
[2025-06-09 19:46:53] 2025-06-09 17:45:08,721 | INFO     | sizes: {0: 2396564, 1: 2397420, 2: 2397420, 10: 2397654, 12: 2397682, 17759: 2429117, 17760: 2429244, 17765: 2438241, 17768: 2438297, 17859: 2438467}
[2025-06-09 19:46:53] 2025-06-09 17:45:08,721 | INFO     | --------------------------------------------------
[2025-06-09 19:46:53] 2025-06-09 17:45:08,721 | INFO     | 
[2025-06-09 19:46:53] 2025-06-09 17:45:08,721 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-09 19:46:53] 2025-06-09 17:45:09,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-09 19:46:53] 2025-06-09 17:45:09,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-09 19:46:53] 2025-06-09 17:45:09,265 | INFO     | job 6668044621 has completed (purged errors)
[2025-06-09 19:46:53] 2025-06-09 17:45:09,265 | INFO     | overall cleanup function is called
[2025-06-09 19:46:53] 2025-06-09 17:45:10,274 | INFO     | --- collectZombieJob: --- 10, [4441]
[2025-06-09 19:46:53] 2025-06-09 17:45:10,275 | INFO     | zombie collector waiting for pid 4441
[2025-06-09 19:46:53] 2025-06-09 17:45:10,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-09 19:46:53] 2025-06-09 17:45:10,275 | INFO     | collected zombie processes
[2025-06-09 19:46:53] 2025-06-09 17:45:10,275 | INFO     | will attempt to kill all subprocesses of pid=4441
[2025-06-09 19:46:53] 2025-06-09 17:45:10,376 | INFO     | process IDs to be killed: [4441] (in reverse order)
[2025-06-09 19:46:53] 2025-06-09 17:45:11,205 | WARNING  | found no corresponding commands to process id(s)
[2025-06-09 19:46:53] 2025-06-09 17:45:11,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-09 19:46:53] 2025-06-09 17:45:11,209 | INFO     | did not find any defunct processes belonging to 4441
[2025-06-09 19:46:53] 2025-06-09 17:45:11,213 | INFO     | did not find any defunct processes belonging to 4441
[2025-06-09 19:46:53] 2025-06-09 17:45:11,214 | INFO     | ready for new job
[2025-06-09 19:46:53] 2025-06-09 17:45:11,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-09 19:46:53] 2025-06-09 17:45:11,217 | INFO     | **************************************
[2025-06-09 19:46:53] 2025-06-09 17:45:11,217 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-09 19:46:53] 2025-06-09 17:45:11,217 | INFO     | **************************************
[2025-06-09 19:46:53] 2025-06-09 17:45:11,217 | INFO     | 
[2025-06-09 19:46:53] 2025-06-09 17:45:11,218 | INFO     | pilot is running in a VM
[2025-06-09 19:46:53] 2025-06-09 17:45:11,218 | INFO     | architecture information:
[2025-06-09 19:46:53] 2025-06-09 17:45:11,227 | INFO     | executing command: cat /etc/os-release
[2025-06-09 19:46:53] 2025-06-09 17:45:11,420 | INFO     | cat /etc/os-release:
[2025-06-09 19:46:53] NAME="CentOS Linux"
[2025-06-09 19:46:53] VERSION="7 (Core)"
[2025-06-09 19:46:53] ID="centos"
[2025-06-09 19:46:53] ID_LIKE="rhel fedora"
[2025-06-09 19:46:53] VERSION_ID="7"
[2025-06-09 19:46:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-09 19:46:53] ANSI_COLOR="0;31"
[2025-06-09 19:46:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-09 19:46:53] HOME_URL="https://www.centos.org/"
[2025-06-09 19:46:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-09 19:46:53] 
[2025-06-09 19:46:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-09 19:46:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-09 19:46:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-09 19:46:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-09 19:46:53] 
[2025-06-09 19:46:53] 2025-06-09 17:45:11,420 | INFO     | **************************************
[2025-06-09 19:46:53] 2025-06-09 17:45:11,924 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-09 19:46:53] 2025-06-09 17:45:12,045 | INFO     | sufficient remaining disk space (497286119424 B)
[2025-06-09 19:46:53] 2025-06-09 17:45:12,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-09 19:46:53] 2025-06-09 17:45:12,046 | INFO     | current server update state: UPDATING_FINAL
[2025-06-09 19:46:53] 2025-06-09 17:45:12,046 | INFO     | update_server=False
[2025-06-09 19:46:53] 2025-06-09 17:45:12,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-09 19:46:53] 2025-06-09 17:45:12,046 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-09 19:46:53] 2025-06-09 17:45:12,047 | INFO     | found 0 job(s) in 20 queues
[2025-06-09 19:46:53] 2025-06-09 17:45:12,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-09 19:46:53] 2025-06-09 17:45:12,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-09 19:46:53] 2025-06-09 17:45:12,495 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-09 19:46:53] 2025-06-09 17:45:12,496 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-09 19:46:53] 2025-06-09 17:45:12,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-09 19:46:53] 2025-06-09 17:45:12,496 | INFO     | will abort loop
[2025-06-09 19:46:53] 2025-06-09 17:45:12,747 | INFO     | all job control threads have been joined
[2025-06-09 19:46:53] 2025-06-09 17:45:12,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-09 19:46:53] 2025-06-09 17:45:12,898 | INFO     | all payload control threads have been joined
[2025-06-09 19:46:53] 2025-06-09 17:45:13,051 | INFO     | [job] retrieve thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:13,067 | INFO     | [payload] failed_post thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:13,083 | INFO     | [data] copytool_in thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:13,108 | INFO     | all data control threads have been joined
[2025-06-09 19:46:53] 2025-06-09 17:45:13,253 | INFO     | [payload] execute_payloads thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:13,502 | INFO     | [job] job monitor thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:13,683 | INFO     | [payload] validate_pre thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:13,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-09 19:46:53] 2025-06-09 17:45:13,753 | INFO     | [job] control thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:13,904 | INFO     | [payload] control thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:13,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-09 19:46:53] 2025-06-09 17:45:14,114 | INFO     | [data] control thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:14,384 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:14,400 | INFO     | [job] create_data_payload thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:14,527 | INFO     | [job] validate thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:14,654 | INFO     | [payload] validate_post thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:14,738 | INFO     | [job] queue monitor thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:14,898 | INFO     | [data] copytool_out thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:17,996 | INFO     | [data] queue_monitor thread has finished
[2025-06-09 19:46:53] 2025-06-09 17:45:18,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092982712128)>', '<ExcThread(monitor, started 140092530206464)>']
[2025-06-09 19:46:53] 2025-06-09 17:45:19,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-09 19:46:53] 2025-06-09 17:45:19,089 | INFO     | [monitor] control thread has ended
[2025-06-09 19:46:53] 2025-06-09 17:45:23,262 | INFO     | all workflow threads have been joined
[2025-06-09 19:46:53] 2025-06-09 17:45:23,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-09 19:46:53] 2025-06-09 17:45:23,263 | INFO     | traces error code: 0
[2025-06-09 19:46:53] 2025-06-09 17:45:23,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-09 19:46:53] 2025-06-09 17:45:23,593 [wrapper] ==== pilot stdout END ====
[2025-06-09 19:46:53] 2025-06-09 17:45:23,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-09 19:46:53] 2025-06-09 17:45:23,611 [wrapper] pilotpid: 30272
[2025-06-09 19:46:53] 2025-06-09 17:45:23,624 [wrapper] Pilot exit status: 0
[2025-06-09 19:46:53] 2025-06-09 17:45:24,083 [wrapper] pandaids: 6668044621
[2025-06-09 19:46:53] 2025-06-09 17:45:24,648 [wrapper] cleanup supervisor_pilot 12791 30273
[2025-06-09 19:46:53] 2025-06-09 17:45:24,659 [wrapper] Test setup, not cleaning
[2025-06-09 19:46:53] 2025-06-09 17:45:24,677 [wrapper] apfmon messages muted
[2025-06-09 19:46:53] 2025-06-09 17:45:24,695 [wrapper] ==== wrapper stdout END ====
[2025-06-09 19:46:53] 2025-06-09 17:45:24,714 [wrapper] ==== wrapper stderr END ====
[2025-06-09 19:46:53]  *** Error codes and diagnostics ***
[2025-06-09 19:46:53]     "exeErrorCode": 0,
[2025-06-09 19:46:53]     "exeErrorDiag": "",
[2025-06-09 19:46:53]     "pilotErrorCode": 0,
[2025-06-09 19:46:53]     "pilotErrorDiag": "",
[2025-06-09 19:46:53]  *** Listing of results directory ***
[2025-06-09 19:46:53] total 418448
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc    495897 May 28 06:31 pilot3.tar.gz
[2025-06-09 19:46:53] -rwx------. 1 boinc boinc     37140 May 28 07:02 runpilot2-wrapper.sh
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc      5111 May 28 07:02 queuedata.json
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc       100 Jun  9 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-09 19:46:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  9 14:45 run_atlas
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc       105 Jun  9 14:45 job.xml
[2025-06-09 19:46:53] -rw-r--r--. 2 boinc boinc 222813265 Jun  9 14:45 EVNT.44871834._003087.pool.root.1
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc      6390 Jun  9 14:45 init_data.xml
[2025-06-09 19:46:53] -rw-r--r--. 2 boinc boinc     15093 Jun  9 14:45 start_atlas.sh
[2025-06-09 19:46:53] drwxrwx--x. 2 boinc boinc        68 Jun  9 14:45 shared
[2025-06-09 19:46:53] -rw-r--r--. 2 boinc boinc    508878 Jun  9 14:45 input.tar.gz
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc         0 Jun  9 14:45 boinc_lockfile
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc      2559 Jun  9 14:46 pandaJob.out
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc    985125 Jun  9 14:47 agis_schedconf.cvmfs.json
[2025-06-09 19:46:53] drwx------. 4 boinc boinc      4096 Jun  9 14:47 pilot3
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc 197963801 Jun  9 19:42 HITS.44871837._078991.pool.root.1
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc       531 Jun  9 19:42 boinc_task_state.xml
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc      1020 Jun  9 19:43 memory_monitor_summary.json
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc   1598969 Jun  9 19:43 agis_ddmendpoints.agis.ALL.json
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc    423206 Jun  9 19:43 log.44871837._078991.job.log.tgz.1
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc        95 Jun  9 19:44 pilot_heartbeat.json
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc      7690 Jun  9 19:45 heartbeat.json
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc      4725 Jun  9 19:45 pilotlog.txt
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc   1526599 Jun  9 19:45 log.44871837._078991.job.log.1
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc       357 Jun  9 19:45 output.list
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc       620 Jun  9 19:45 runtime_log
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc   1966080 Jun  9 19:45 result.tar.gz
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc       657 Jun  9 19:45 Xx9NDmu6Ne7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdwSKDmvRIZGn.diag
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc      8659 Jun  9 19:45 runtime_log.err
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc        28 Jun  9 19:46 wrapper_checkpoint.txt
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc      8192 Jun  9 19:46 boinc_mmap_file
[2025-06-09 19:46:53] -rw-r--r--. 1 boinc boinc     20749 Jun  9 19:46 stderr.txt
[2025-06-09 19:46:53] HITS file was successfully produced:
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc 197963801 Jun  9 19:42 shared/HITS.pool.root.1
[2025-06-09 19:46:53]  *** Contents of shared directory: ***
[2025-06-09 19:46:53] total 413356
[2025-06-09 19:46:53] -rw-r--r--. 2 boinc boinc 222813265 Jun  9 14:45 ATLAS.root_0
[2025-06-09 19:46:53] -rw-r--r--. 2 boinc boinc     15093 Jun  9 14:45 start_atlas.sh
[2025-06-09 19:46:53] -rw-r--r--. 2 boinc boinc    508878 Jun  9 14:45 input.tar.gz
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc 197963801 Jun  9 19:42 HITS.pool.root.1
[2025-06-09 19:46:53] -rw-------. 1 boinc boinc   1966080 Jun  9 19:45 result.tar.gz
19:46:55 (26218): run_atlas exited; CPU time 66466.344199
19:46:55 (26218): called boinc_finish(0)

</stderr_txt>
]]>

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