Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:19:13 (2172823): wrapper (7.7.26015): starting
19:19:13 (2172823): wrapper: running run_atlas (--nthreads 12)
[2025-06-07 19:19:13] Arguments: --nthreads 12
[2025-06-07 19:19:13] Threads: 12
[2025-06-07 19:19:13] Checking for CVMFS
[2025-06-07 19:19:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-07 19:19:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-07 19:19:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-07 19:19:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-07 19:19:13] 2.12.6.0 40552 5769 299184 146915 0 399 18254072 32935937 8661 16776704 0 20479407 99.660 25325758 35672 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-07 19:19:13] CVMFS is ok
[2025-06-07 19:19:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 19:19:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-07 19:19:13] Further information can be found at the LHC@home message board.
[2025-06-07 19:19:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 19:19:13] Checking for apptainer binary...
[2025-06-07 19:19:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-07 19:19:13] Running /usr/bin/apptainer --version
[2025-06-07 19:19:14] apptainer version 1.4.1-1.el9
[2025-06-07 19:19:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 19:19:14] c6-1-26-4.aglt2.org
[2025-06-07 19:19:14] apptainer works
[2025-06-07 19:19:14] Set ATHENA_PROC_NUMBER=12
[2025-06-07 19:19:14] Set ATHENA_CORE_NUMBER=12
[2025-06-07 19:19:14] Starting ATLAS job with PandaID=6684007198
[2025-06-07 19:19:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 20:41:00]  *** The last 200 lines of the pilot log: ***
[2025-06-07 20:41:00]  mtime=0
[2025-06-07 20:41:00]  protocol_id=None
[2025-06-07 20:41:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-07 20:41:00]  replicas=None
[2025-06-07 20:41:00]  scope=mc23_13p6TeV
[2025-06-07 20:41:00]  status=None
[2025-06-07 20:41:00]  status_code=0
[2025-06-07 20:41:00]  storage_token=
[2025-06-07 20:41:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6684007198/log.45006595._057206.job.log.tgz.1
[2025-06-07 20:41:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/8c/log.45006595._057206.job.log.tgz.1
[2025-06-07 20:41:00]  workdir=None
[2025-06-07 20:41:00] ]
[2025-06-07 20:41:00] 2025-06-08 00:40:18,973 | INFO     | transferring file log.45006595._057206.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6684007198/log.45006595._057206.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-07 20:41:00] 2025-06-08 00:40:18,973 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6684007198/log.45006595._057206.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._057206.job
[2025-06-07 20:41:00] 2025-06-08 00:40:18,990 | INFO     | adding to output.list: log.45006595._057206.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/8c/log.45006595._057206.job.log.tg
[2025-06-07 20:41:00] 2025-06-08 00:40:18,991 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-07 20:41:00] 2025-06-08 00:40:18,992 | INFO     | summary of transferred files:
[2025-06-07 20:41:00] 2025-06-08 00:40:18,992 | INFO     |  -- lfn=log.45006595._057206.job.log.tgz.1, status_code=0, status=transferred
[2025-06-07 20:41:00] 2025-06-08 00:40:18,992 | INFO     | stage-out finished correctly
[2025-06-07 20:41:00] 2025-06-08 00:40:20,471 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-07 20:41:00] 2025-06-08 00:40:20,613 | INFO     | monitor loop #336: job 0:6684007198 is in state 'finished'
[2025-06-07 20:41:00] 2025-06-08 00:40:20,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 20:41:00] 2025-06-08 00:40:23,011 | INFO     | job 6684007198 has state=finished
[2025-06-07 20:41:00] 2025-06-08 00:40:23,011 | INFO     | preparing for final server update for job 6684007198 in state='finished'
[2025-06-07 20:41:00] 2025-06-08 00:40:23,012 | INFO     | this job has now completed (state=finished)
[2025-06-07 20:41:00] 2025-06-08 00:40:23,012 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-07 20:41:00] 2025-06-08 00:40:23,012 | INFO     | log transfer has been attempted: DONE
[2025-06-07 20:41:00] 2025-06-08 00:40:23,012 | INFO     | job 6684007198 has finished - writing final server update
[2025-06-07 20:41:00] 2025-06-08 00:40:23,012 | INFO     | total number of processed events: 400 (read)
[2025-06-07 20:41:00] 2025-06-08 00:40:23,015 | INFO     | executing command: lscpu
[2025-06-07 20:41:00] 2025-06-08 00:40:23,071 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-07 20:41:00] 2025-06-08 00:40:23,117 | INFO     | monitor loop #337: job 0:6684007198 is in state 'finished'
[2025-06-07 20:41:00] 2025-06-08 00:40:23,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 20:41:00] 2025-06-08 00:40:25,624 | INFO     | monitor loop #338: job 0:6684007198 is in state 'finished'
[2025-06-07 20:41:00] 2025-06-08 00:40:25,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 20:41:00] 2025-06-08 00:40:25,929 | INFO     | PID=2176512 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-07 20:41:00] 2025-06-08 00:40:25,929 | INFO     | .. there are 8 such processes running
[2025-06-07 20:41:00] 2025-06-08 00:40:27,368 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-07 20:41:00] 2025-06-08 00:40:27,371 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2824.706428571428
[2025-06-07 20:41:00] 2025-06-08 00:40:27,376 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6684007198/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 20:41:00] 2025-06-08 00:40:27,376 | INFO     | extracted standard info from prmon json
[2025-06-07 20:41:00] 2025-06-08 00:40:27,376 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 20:41:00] 2025-06-08 00:40:27,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 20:41:00] 2025-06-08 00:40:27,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 20:41:00] 2025-06-08 00:40:27,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | fitting pss+swap vs Time
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | sum of square deviations: 120616533.31506869
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | sum of deviations: -12888623164.410957
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | mean x: 1749340894.1917808
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | mean y: 2661373.315068493
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | -- intersect: 186930563806.3624
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | intersect: 186930563806.3624
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | chi2: 0.1895885204677258
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | -- intersect: 186930563806.3624
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | current memory leak: -106.86 B/s (using 73 data points, chi2=0.19)
[2025-06-07 20:41:00] 2025-06-08 00:40:27,378 | INFO     | could have reported an average CPU frequency of 2884 MHz (6 samples)
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | ..............................
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | . Timing measurements:
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | . get job = 0 s
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | . initial setup = 3 s
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | . payload setup = 7 s
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | . stage-in = 0 s
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | . payload execution = 4825 s
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | . stage-out = 0 s
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | . log creation = 0 s
[2025-06-07 20:41:00] 2025-06-08 00:40:27,379 | INFO     | ..............................
[2025-06-07 20:41:00] 2025-06-08 00:40:27,425 | INFO     | 
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | job summary report
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | --------------------------------------------------
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | PanDA job id: 6684007198
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | task id: 45006595
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | errors: (none)
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | pilot state: finished 
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | transexitcode: 0
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | exeerrorcode: 0
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | exeerrordiag: 
[2025-06-07 20:41:00] 2025-06-08 00:40:27,426 | INFO     | exitcode: 0
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | exitmsg: OK
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | cpuconsumptiontime: 33821 s
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | nevents: 400
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | neventsw: 0
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | pid: 2184269
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | pgrp: 2184269
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | corecount: 12
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | event service: False
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | sizes: {0: 2397516, 1: 2397658, 4: 2397920, 11: 2397948, 4837: 2424131, 4838: 2433072, 4840: 2433256, 4847: 2433450}
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | --------------------------------------------------
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | 
[2025-06-07 20:41:00] 2025-06-08 00:40:27,427 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-07 20:41:00] 2025-06-08 00:40:27,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 20:41:00] 2025-06-08 00:40:27,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 20:41:00] 2025-06-08 00:40:27,450 | INFO     | job 6684007198 has completed (purged errors)
[2025-06-07 20:41:00] 2025-06-08 00:40:27,450 | INFO     | overall cleanup function is called
[2025-06-07 20:41:00] 2025-06-08 00:40:28,457 | INFO     | --- collectZombieJob: --- 10, [2184269]
[2025-06-07 20:41:00] 2025-06-08 00:40:28,457 | INFO     | zombie collector waiting for pid 2184269
[2025-06-07 20:41:00] 2025-06-08 00:40:28,458 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 20:41:00] 2025-06-08 00:40:28,458 | INFO     | collected zombie processes
[2025-06-07 20:41:00] 2025-06-08 00:40:28,458 | INFO     | will attempt to kill all subprocesses of pid=2184269
[2025-06-07 20:41:00] 2025-06-08 00:40:28,715 | INFO     | process IDs to be killed: [2184269] (in reverse order)
[2025-06-07 20:41:00] 2025-06-08 00:40:28,805 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 20:41:00] 2025-06-08 00:40:28,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 20:41:00] 2025-06-08 00:40:28,816 | INFO     | did not find any defunct processes belonging to 2184269
[2025-06-07 20:41:00] 2025-06-08 00:40:28,827 | INFO     | did not find any defunct processes belonging to 2184269
[2025-06-07 20:41:00] 2025-06-08 00:40:28,828 | INFO     | ready for new job
[2025-06-07 20:41:00] 2025-06-08 00:40:28,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 20:41:00] 2025-06-08 00:40:28,829 | INFO     | ***************************************
[2025-06-07 20:41:00] 2025-06-08 00:40:28,830 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-07 20:41:00] 2025-06-08 00:40:28,830 | INFO     | ***************************************
[2025-06-07 20:41:00] 2025-06-08 00:40:28,830 | INFO     | 
[2025-06-07 20:41:00] 2025-06-08 00:40:28,846 | INFO     | architecture information:
[2025-06-07 20:41:00] 2025-06-08 00:40:28,846 | INFO     | executing command: cat /etc/os-release
[2025-06-07 20:41:00] 2025-06-08 00:40:28,862 | INFO     | cat /etc/os-release:
[2025-06-07 20:41:00] NAME="CentOS Linux"
[2025-06-07 20:41:00] VERSION="7 (Core)"
[2025-06-07 20:41:00] ID="centos"
[2025-06-07 20:41:00] ID_LIKE="rhel fedora"
[2025-06-07 20:41:00] VERSION_ID="7"
[2025-06-07 20:41:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 20:41:00] ANSI_COLOR="0;31"
[2025-06-07 20:41:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 20:41:00] HOME_URL="https://www.centos.org/"
[2025-06-07 20:41:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 20:41:00] 
[2025-06-07 20:41:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 20:41:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 20:41:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 20:41:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 20:41:00] 
[2025-06-07 20:41:00] 2025-06-08 00:40:28,863 | INFO     | ***************************************
[2025-06-07 20:41:00] 2025-06-08 00:40:29,367 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-07 20:41:00] 2025-06-08 00:40:29,395 | INFO     | sufficient remaining disk space (75891736576 B)
[2025-06-07 20:41:00] 2025-06-08 00:40:29,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 20:41:00] 2025-06-08 00:40:29,395 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 20:41:00] 2025-06-08 00:40:29,395 | INFO     | update_server=False
[2025-06-07 20:41:00] 2025-06-08 00:40:29,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 20:41:00] 2025-06-08 00:40:29,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 20:41:00] 2025-06-08 00:40:29,396 | INFO     | aborting loop
[2025-06-07 20:41:00] 2025-06-08 00:40:29,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 20:41:00] 2025-06-08 00:40:29,547 | INFO     | all data control threads have been joined
[2025-06-07 20:41:00] 2025-06-08 00:40:29,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 20:41:00] 2025-06-08 00:40:30,351 | INFO     | all job control threads have been joined
[2025-06-07 20:41:00] 2025-06-08 00:40:30,400 | INFO     | [job] retrieve thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:30,401 | INFO     | [job] job monitor thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:30,402 | INFO     | [job] queue monitor thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:30,475 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:30,543 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:30,551 | INFO     | all payload control threads have been joined
[2025-06-07 20:41:00] 2025-06-08 00:40:30,553 | INFO     | [data] control thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:30,833 | INFO     | [data] copytool_in thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:30,975 | INFO     | [payload] failed_post thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:31,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:31,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 20:41:00] 2025-06-08 00:40:31,334 | INFO     | [job] validate thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:31,338 | INFO     | [payload] validate_post thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:31,356 | INFO     | [job] control thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:31,556 | INFO     | [payload] control thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:31,605 | INFO     | [data] copytool_out thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:31,823 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:35,105 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 20:41:00] 2025-06-08 00:40:36,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436369299264)>', '<ExcThread(monitor, started 140435733329664)>']
[2025-06-07 20:41:00] 2025-06-08 00:40:41,817 | INFO     | all workflow threads have been joined
[2025-06-07 20:41:00] 2025-06-08 00:40:41,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 20:41:00] 2025-06-08 00:40:41,818 | INFO     | traces error code: 0
[2025-06-07 20:41:00] 2025-06-08 00:40:41,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 20:41:00] 2025-06-08 00:41:00,356 | INFO     | PID=2176512 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-07 20:41:00] 2025-06-08 00:41:00,357 | INFO     | .. there are 8 such processes running
[2025-06-07 20:41:00] 2025-06-08 00:41:00,357 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 20:41:00] 2025-06-08 00:41:00,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 20:41:00] 2025-06-08 00:41:00,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 20:41:00] 2025-06-08 00:41:00,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 20:41:00] 2025-06-08 00:41:00,358 | INFO     | [monitor] control thread has ended
[2025-06-07 20:41:00] 2025-06-08 00:41:00,543 [wrapper] ==== pilot stdout END ====
[2025-06-07 20:41:00] 2025-06-08 00:41:00,547 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 20:41:00] 2025-06-08 00:41:00,550 [wrapper] pilotpid: 2176512
[2025-06-07 20:41:00] 2025-06-08 00:41:00,553 [wrapper] Pilot exit status: 0
[2025-06-07 20:41:00] 2025-06-08 00:41:00,579 [wrapper] pandaids: 6684007198
[2025-06-07 20:41:00] 2025-06-08 00:41:00,658 [wrapper] cleanup supervisor_pilot 2475275 2176513
[2025-06-07 20:41:00] 2025-06-08 00:41:00,661 [wrapper] Test setup, not cleaning
[2025-06-07 20:41:00] 2025-06-08 00:41:00,665 [wrapper] apfmon messages muted
[2025-06-07 20:41:00] 2025-06-08 00:41:00,668 [wrapper] ==== wrapper stdout END ====
[2025-06-07 20:41:00] 2025-06-08 00:41:00,671 [wrapper] ==== wrapper stderr END ====
[2025-06-07 20:41:00]  *** Error codes and diagnostics ***
[2025-06-07 20:41:00]     "exeErrorCode": 0,
[2025-06-07 20:41:00]     "exeErrorDiag": "",
[2025-06-07 20:41:00]     "pilotErrorCode": 0,
[2025-06-07 20:41:00]     "pilotErrorDiag": "",
[2025-06-07 20:41:00]  *** Listing of results directory ***
[2025-06-07 20:41:00] total 392664
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas    529402 Jun  7 18:55 pilot3.tar.gz
[2025-06-07 20:41:00] -rwx------. 1 boincer umatlas     37140 Jun  7 19:18 runpilot2-wrapper.sh
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas      5112 Jun  7 19:18 queuedata.json
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas       100 Jun  7 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 20:41:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  7 19:19 run_atlas
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas       105 Jun  7 19:19 job.xml
[2025-06-07 20:41:00] -rw-r--r--. 2 boincer umatlas 216696550 Jun  7 19:19 EVNT.45006593._000851.pool.root.1
[2025-06-07 20:41:00] -rw-r--r--. 2 boincer umatlas     15095 Jun  7 19:19 start_atlas.sh
[2025-06-07 20:41:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  7 19:19 shared
[2025-06-07 20:41:00] -rw-r--r--. 2 boincer umatlas    541910 Jun  7 19:19 input.tar.gz
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas         0 Jun  7 19:19 boinc_lockfile
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas      2523 Jun  7 19:19 pandaJob.out
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas    985748 Jun  7 19:19 agis_schedconf.cvmfs.json
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas   1598969 Jun  7 19:19 agis_ddmendpoints.agis.ALL.json
[2025-06-07 20:41:00] drwx------. 4 boincer umatlas      4096 Jun  7 19:19 pilot3
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas      6841 Jun  7 20:38 init_data.xml
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas 179829736 Jun  7 20:39 HITS.45006595._057206.pool.root.1
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas       529 Jun  7 20:39 boinc_task_state.xml
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas      1037 Jun  7 20:40 memory_monitor_summary.json
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas    372472 Jun  7 20:40 log.45006595._057206.job.log.tgz.1
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas      7752 Jun  7 20:40 heartbeat.json
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  7 20:40 boinc_mmap_file
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas        27 Jun  7 20:40 wrapper_checkpoint.txt
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas       822 Jun  7 20:41 pilotlog.txt
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas        95 Jun  7 20:41 pilot_heartbeat.json
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas    463400 Jun  7 20:41 log.45006595._057206.job.log.1
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas       357 Jun  7 20:41 output.list
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas       620 Jun  7 20:41 runtime_log
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas    860160 Jun  7 20:41 result.tar.gz
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas      8667 Jun  7 20:41 runtime_log.err
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas       654 Jun  7 20:41 CAAODmSzHi7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG8nKDmkj4nSo.diag
[2025-06-07 20:41:00] -rw-r--r--. 1 boincer umatlas     21850 Jun  7 20:41 stderr.txt
[2025-06-07 20:41:00] HITS file was successfully produced:
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas 179829736 Jun  7 20:39 shared/HITS.pool.root.1
[2025-06-07 20:41:00]  *** Contents of shared directory: ***
[2025-06-07 20:41:00] total 388624
[2025-06-07 20:41:00] -rw-r--r--. 2 boincer umatlas 216696550 Jun  7 19:19 ATLAS.root_0
[2025-06-07 20:41:00] -rw-r--r--. 2 boincer umatlas     15095 Jun  7 19:19 start_atlas.sh
[2025-06-07 20:41:00] -rw-r--r--. 2 boincer umatlas    541910 Jun  7 19:19 input.tar.gz
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas 179829736 Jun  7 20:39 HITS.pool.root.1
[2025-06-07 20:41:00] -rw-------. 1 boincer umatlas    860160 Jun  7 20:41 result.tar.gz
20:41:02 (2172823): run_atlas exited; CPU time 33884.645177
20:41:02 (2172823): called boinc_finish(0)

</stderr_txt>
]]>

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