Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:21 (13318): wrapper (7.7.26015): starting
10:58:21 (13318): wrapper: running run_atlas (--nthreads 12)
[2025-06-07 10:58:21] Arguments: --nthreads 12
[2025-06-07 10:58:21] Threads: 12
[2025-06-07 10:58:21] Checking for CVMFS
[2025-06-07 10:58:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-07 10:58:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-07 10:58:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-07 10:58:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-07 10:58:21] 2.11.2.0 2914 40152 87240 146902 0 1 11150502 20275200 1 130560 0 16867977 99.982 6942143 8355 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-07 10:58:21] CVMFS is ok
[2025-06-07 10:58:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 10:58:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-07 10:58:21] Further information can be found at the LHC@home message board.
[2025-06-07 10:58:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 10:58:21] Checking for apptainer binary...
[2025-06-07 10:58:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-07 10:58:21] Running /usr/bin/apptainer --version
[2025-06-07 10:58:21] apptainer version 1.3.2-1.el7
[2025-06-07 10:58:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 10:58:23] c-205-5.aglt2.org
[2025-06-07 10:58:23] apptainer works
[2025-06-07 10:58:23] Set ATHENA_PROC_NUMBER=12
[2025-06-07 10:58:23] Set ATHENA_CORE_NUMBER=12
[2025-06-07 10:58:23] Starting ATLAS job with PandaID=6683606313
[2025-06-07 10:58:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 12:02:35]  *** The last 200 lines of the pilot log: ***
[2025-06-07 12:02:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-07 12:02:35]  is_altstaged=None
[2025-06-07 12:02:35]  is_tar=False
[2025-06-07 12:02:35]  lfn=log.45006595._057195.job.log.tgz.1
[2025-06-07 12:02:35]  mtime=0
[2025-06-07 12:02:35]  protocol_id=None
[2025-06-07 12:02:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-07 12:02:35]  replicas=None
[2025-06-07 12:02:35]  scope=mc23_13p6TeV
[2025-06-07 12:02:35]  status=None
[2025-06-07 12:02:35]  status_code=0
[2025-06-07 12:02:35]  storage_token=
[2025-06-07 12:02:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6683606313/log.45006595._057195.job.log.tgz.1
[2025-06-07 12:02:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/1d/log.45006595._057195.job.log.tgz.1
[2025-06-07 12:02:35]  workdir=None
[2025-06-07 12:02:35] ]
[2025-06-07 12:02:35] 2025-06-07 16:01:56,667 | INFO     | transferring file log.45006595._057195.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6683606313/log.45006595._057195.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-07 12:02:35] 2025-06-07 16:01:56,667 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6683606313/log.45006595._057195.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._057195.job
[2025-06-07 12:02:35] 2025-06-07 16:01:56,689 | INFO     | adding to output.list: log.45006595._057195.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/1d/log.45006595._057195.job.log.tg
[2025-06-07 12:02:35] 2025-06-07 16:01:56,690 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-07 12:02:35] 2025-06-07 16:01:56,690 | INFO     | summary of transferred files:
[2025-06-07 12:02:35] 2025-06-07 16:01:56,690 | INFO     |  -- lfn=log.45006595._057195.job.log.tgz.1, status_code=0, status=transferred
[2025-06-07 12:02:35] 2025-06-07 16:01:56,690 | INFO     | stage-out finished correctly
[2025-06-07 12:02:35] 2025-06-07 16:01:56,775 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-07 12:02:35] 2025-06-07 16:01:58,245 | INFO     | job 6683606313 has state=finished
[2025-06-07 12:02:35] 2025-06-07 16:01:58,245 | INFO     | preparing for final server update for job 6683606313 in state='finished'
[2025-06-07 12:02:35] 2025-06-07 16:01:58,246 | INFO     | this job has now completed (state=finished)
[2025-06-07 12:02:35] 2025-06-07 16:01:58,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-07 12:02:35] 2025-06-07 16:01:58,246 | INFO     | log transfer has been attempted: DONE
[2025-06-07 12:02:35] 2025-06-07 16:01:58,246 | INFO     | job 6683606313 has finished - writing final server update
[2025-06-07 12:02:35] 2025-06-07 16:01:58,247 | INFO     | total number of processed events: 400 (read)
[2025-06-07 12:02:35] 2025-06-07 16:01:58,248 | INFO     | executing command: lscpu
[2025-06-07 12:02:35] 2025-06-07 16:01:58,271 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-07 12:02:35] 2025-06-07 16:01:59,106 | INFO     | monitor loop #289: job 0:6683606313 is in state 'finished'
[2025-06-07 12:02:35] 2025-06-07 16:01:59,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 12:02:35] 2025-06-07 16:02:01,609 | INFO     | monitor loop #290: job 0:6683606313 is in state 'finished'
[2025-06-07 12:02:35] 2025-06-07 16:02:01,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 12:02:35] 2025-06-07 16:02:03,004 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-07 12:02:35] 2025-06-07 16:02:03,008 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-06-07 12:02:35] 2025-06-07 16:02:03,009 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6683606313/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 12:02:35] 2025-06-07 16:02:03,010 | INFO     | extracted standard info from prmon json
[2025-06-07 12:02:35] 2025-06-07 16:02:03,010 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 12:02:35] 2025-06-07 16:02:03,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 12:02:35] 2025-06-07 16:02:03,011 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 12:02:35] 2025-06-07 16:02:03,011 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 12:02:35] 2025-06-07 16:02:03,012 | INFO     | fitting pss+swap vs Time
[2025-06-07 12:02:35] 2025-06-07 16:02:03,012 | INFO     | sum of square deviations: 51573060.0
[2025-06-07 12:02:35] 2025-06-07 16:02:03,013 | INFO     | sum of deviations: -3359228031.9999995
[2025-06-07 12:02:35] 2025-06-07 16:02:03,013 | INFO     | mean x: 1749310300.0
[2025-06-07 12:02:35] 2025-06-07 16:02:03,013 | INFO     | mean y: 2709771.909090909
[2025-06-07 12:02:35] 2025-06-07 16:02:03,013 | INFO     | -- intersect: 113944604947.92401
[2025-06-07 12:02:35] 2025-06-07 16:02:03,013 | INFO     | intersect: 113944604947.92401
[2025-06-07 12:02:35] 2025-06-07 16:02:03,013 | INFO     | chi2: 0.049280522895538276
[2025-06-07 12:02:35] 2025-06-07 16:02:03,013 | INFO     | -- intersect: 113944604947.92401
[2025-06-07 12:02:35] 2025-06-07 16:02:03,013 | INFO     | current memory leak: -65.14 B/s (using 55 data points, chi2=0.05)
[2025-06-07 12:02:35] 2025-06-07 16:02:03,014 | INFO     | could have reported an average CPU frequency of 1999 MHz (6 samples)
[2025-06-07 12:02:35] 2025-06-07 16:02:03,014 | INFO     | ..............................
[2025-06-07 12:02:35] 2025-06-07 16:02:03,014 | INFO     | . Timing measurements:
[2025-06-07 12:02:35] 2025-06-07 16:02:03,014 | INFO     | . get job = 0 s
[2025-06-07 12:02:35] 2025-06-07 16:02:03,014 | INFO     | . initial setup = 2 s
[2025-06-07 12:02:35] 2025-06-07 16:02:03,014 | INFO     | . payload setup = 9 s
[2025-06-07 12:02:35] 2025-06-07 16:02:03,014 | INFO     | . stage-in = 0 s
[2025-06-07 12:02:35] 2025-06-07 16:02:03,014 | INFO     | . payload execution = 3768 s
[2025-06-07 12:02:35] 2025-06-07 16:02:03,015 | INFO     | . stage-out = 0 s
[2025-06-07 12:02:35] 2025-06-07 16:02:03,015 | INFO     | . log creation = 0 s
[2025-06-07 12:02:35] 2025-06-07 16:02:03,015 | INFO     | ..............................
[2025-06-07 12:02:35] 2025-06-07 16:02:03,097 | INFO     | 
[2025-06-07 12:02:35] 2025-06-07 16:02:03,097 | INFO     | job summary report
[2025-06-07 12:02:35] 2025-06-07 16:02:03,097 | INFO     | --------------------------------------------------
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | PanDA job id: 6683606313
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | task id: 45006595
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | errors: (none)
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | pilot state: finished 
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | transexitcode: 0
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | exeerrorcode: 0
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | exeerrordiag: 
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | exitcode: 0
[2025-06-07 12:02:35] 2025-06-07 16:02:03,098 | INFO     | exitmsg: OK
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | cpuconsumptiontime: 40857 s
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | nevents: 400
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | neventsw: 0
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | pid: 23445
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | pgrp: 23445
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | corecount: 12
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | event service: False
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | sizes: {0: 2397632, 5: 2397894, 11: 2397950, 3782: 2423701, 3783: 2432698, 3789: 2432836}
[2025-06-07 12:02:35] 2025-06-07 16:02:03,099 | INFO     | --------------------------------------------------
[2025-06-07 12:02:35] 2025-06-07 16:02:03,100 | INFO     | 
[2025-06-07 12:02:35] 2025-06-07 16:02:03,100 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-07 12:02:35] 2025-06-07 16:02:03,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 12:02:35] 2025-06-07 16:02:03,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 12:02:35] 2025-06-07 16:02:03,127 | INFO     | job 6683606313 has completed (purged errors)
[2025-06-07 12:02:35] 2025-06-07 16:02:03,127 | INFO     | overall cleanup function is called
[2025-06-07 12:02:35] 2025-06-07 16:02:04,135 | INFO     | --- collectZombieJob: --- 10, [23445]
[2025-06-07 12:02:35] 2025-06-07 16:02:04,135 | INFO     | zombie collector waiting for pid 23445
[2025-06-07 12:02:35] 2025-06-07 16:02:04,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 12:02:35] 2025-06-07 16:02:04,135 | INFO     | collected zombie processes
[2025-06-07 12:02:35] 2025-06-07 16:02:04,136 | INFO     | will attempt to kill all subprocesses of pid=23445
[2025-06-07 12:02:35] 2025-06-07 16:02:04,226 | INFO     | process IDs to be killed: [23445] (in reverse order)
[2025-06-07 12:02:35] 2025-06-07 16:02:04,274 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 12:02:35] 2025-06-07 16:02:04,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 12:02:35] 2025-06-07 16:02:04,278 | INFO     | did not find any defunct processes belonging to 23445
[2025-06-07 12:02:35] 2025-06-07 16:02:04,280 | INFO     | did not find any defunct processes belonging to 23445
[2025-06-07 12:02:35] 2025-06-07 16:02:04,280 | INFO     | ready for new job
[2025-06-07 12:02:35] 2025-06-07 16:02:04,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 12:02:35] 2025-06-07 16:02:04,281 | INFO     | ***************************************
[2025-06-07 12:02:35] 2025-06-07 16:02:04,282 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-07 12:02:35] 2025-06-07 16:02:04,282 | INFO     | ***************************************
[2025-06-07 12:02:35] 2025-06-07 16:02:04,282 | INFO     | 
[2025-06-07 12:02:35] 2025-06-07 16:02:04,282 | INFO     | architecture information:
[2025-06-07 12:02:35] 2025-06-07 16:02:04,283 | INFO     | executing command: cat /etc/os-release
[2025-06-07 12:02:35] 2025-06-07 16:02:04,298 | INFO     | cat /etc/os-release:
[2025-06-07 12:02:35] NAME="CentOS Linux"
[2025-06-07 12:02:35] VERSION="7 (Core)"
[2025-06-07 12:02:35] ID="centos"
[2025-06-07 12:02:35] ID_LIKE="rhel fedora"
[2025-06-07 12:02:35] VERSION_ID="7"
[2025-06-07 12:02:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 12:02:35] ANSI_COLOR="0;31"
[2025-06-07 12:02:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 12:02:35] HOME_URL="https://www.centos.org/"
[2025-06-07 12:02:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 12:02:35] 
[2025-06-07 12:02:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 12:02:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 12:02:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 12:02:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 12:02:35] 
[2025-06-07 12:02:35] 2025-06-07 16:02:04,299 | INFO     | ***************************************
[2025-06-07 12:02:35] 2025-06-07 16:02:04,802 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-07 12:02:35] 2025-06-07 16:02:04,819 | INFO     | sufficient remaining disk space (29417799680 B)
[2025-06-07 12:02:35] 2025-06-07 16:02:04,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 12:02:35] 2025-06-07 16:02:04,819 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 12:02:35] 2025-06-07 16:02:04,820 | INFO     | update_server=False
[2025-06-07 12:02:35] 2025-06-07 16:02:04,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 12:02:35] 2025-06-07 16:02:04,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 12:02:35] 2025-06-07 16:02:04,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 12:02:35] 2025-06-07 16:02:05,065 | INFO     | all job control threads have been joined
[2025-06-07 12:02:35] 2025-06-07 16:02:05,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 12:02:35] 2025-06-07 16:02:05,116 | INFO     | aborting loop
[2025-06-07 12:02:35] 2025-06-07 16:02:05,589 | INFO     | all data control threads have been joined
[2025-06-07 12:02:35] 2025-06-07 16:02:05,825 | INFO     | [job] retrieve thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:05,826 | INFO     | [job] queue monitor thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:05,862 | INFO     | [data] copytool_in thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:05,949 | INFO     | all payload control threads have been joined
[2025-06-07 12:02:35] 2025-06-07 16:02:05,975 | INFO     | [payload] failed_post thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:06,071 | INFO     | [job] control thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:06,123 | INFO     | [job] job monitor thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:06,373 | INFO     | [job] validate thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:06,557 | INFO     | [payload] validate_post thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:06,595 | INFO     | [data] control thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:06,822 | INFO     | [data] copytool_out thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:06,842 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:06,955 | INFO     | [payload] control thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:07,004 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:07,047 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:07,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 12:02:35] 2025-06-07 16:02:11,362 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:15,334 | INFO     | job.realtimelogging is not enabled
[2025-06-07 12:02:35] 2025-06-07 16:02:16,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 12:02:35] 2025-06-07 16:02:16,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040704272192)>', '<ExcThread(monitor, started 140039648421632)>']
[2025-06-07 12:02:35] 2025-06-07 16:02:21,507 | INFO     | all workflow threads have been joined
[2025-06-07 12:02:35] 2025-06-07 16:02:21,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 12:02:35] 2025-06-07 16:02:21,508 | INFO     | traces error code: 0
[2025-06-07 12:02:35] 2025-06-07 16:02:21,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 12:02:35] 2025-06-07 16:02:35,632 | INFO     | PID=16993 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-07 12:02:35] 2025-06-07 16:02:35,633 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 12:02:35] 2025-06-07 16:02:35,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 12:02:35] 2025-06-07 16:02:35,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 12:02:35] 2025-06-07 16:02:35,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 12:02:35] 2025-06-07 16:02:35,634 | INFO     | [monitor] control thread has ended
[2025-06-07 12:02:35] 2025-06-07 16:02:35,743 [wrapper] ==== pilot stdout END ====
[2025-06-07 12:02:35] 2025-06-07 16:02:35,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 12:02:35] 2025-06-07 16:02:35,751 [wrapper] pilotpid: 16993
[2025-06-07 12:02:35] 2025-06-07 16:02:35,755 [wrapper] Pilot exit status: 0
[2025-06-07 12:02:35] 2025-06-07 16:02:35,771 [wrapper] pandaids: 6683606313
[2025-06-07 12:02:35] 2025-06-07 16:02:35,811 [wrapper] cleanup supervisor_pilot 32435 16994
[2025-06-07 12:02:35] 2025-06-07 16:02:35,814 [wrapper] Test setup, not cleaning
[2025-06-07 12:02:35] 2025-06-07 16:02:35,818 [wrapper] apfmon messages muted
[2025-06-07 12:02:35] 2025-06-07 16:02:35,822 [wrapper] ==== wrapper stdout END ====
[2025-06-07 12:02:35] 2025-06-07 16:02:35,826 [wrapper] ==== wrapper stderr END ====
[2025-06-07 12:02:35]  *** Error codes and diagnostics ***
[2025-06-07 12:02:35]     "exeErrorCode": 0,
[2025-06-07 12:02:35]     "exeErrorDiag": "",
[2025-06-07 12:02:35]     "pilotErrorCode": 0,
[2025-06-07 12:02:35]     "pilotErrorDiag": "",
[2025-06-07 12:02:35]  *** Listing of results directory ***
[2025-06-07 12:02:35] total 391000
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas    529402 Jun  7 10:50 pilot3.tar.gz
[2025-06-07 12:02:35] -rwx------ 1 boincer umatlas     37140 Jun  7 10:57 runpilot2-wrapper.sh
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas      5112 Jun  7 10:57 queuedata.json
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas       100 Jun  7 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 12:02:35] -rwxr-xr-x 1 boincer umatlas      7986 Jun  7 10:58 run_atlas
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas       105 Jun  7 10:58 job.xml
[2025-06-07 12:02:35] -rw-r--r-- 2 boincer umatlas 216152415 Jun  7 10:58 EVNT.45006593._001257.pool.root.1
[2025-06-07 12:02:35] -rw-r--r-- 2 boincer umatlas     15095 Jun  7 10:58 start_atlas.sh
[2025-06-07 12:02:35] drwxrwx--x 2 boincer umatlas      4096 Jun  7 10:58 shared
[2025-06-07 12:02:35] -rw-r--r-- 2 boincer umatlas    541919 Jun  7 10:58 input.tar.gz
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas         0 Jun  7 10:58 boinc_lockfile
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas      2524 Jun  7 10:58 pandaJob.out
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas    985748 Jun  7 10:58 agis_schedconf.cvmfs.json
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas   1598969 Jun  7 10:58 agis_ddmendpoints.agis.ALL.json
[2025-06-07 12:02:35] drwx------ 4 boincer umatlas      4096 Jun  7 10:58 pilot3
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas      5867 Jun  7 12:00 init_data.xml
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas 178865249 Jun  7 12:01 HITS.45006595._057195.pool.root.1
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas      1058 Jun  7 12:01 memory_monitor_summary.json
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas    358700 Jun  7 12:01 log.45006595._057195.job.log.tgz.1
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas       529 Jun  7 12:01 boinc_task_state.xml
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas      7777 Jun  7 12:02 heartbeat.json
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas      8192 Jun  7 12:02 boinc_mmap_file
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas        27 Jun  7 12:02 wrapper_checkpoint.txt
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas       745 Jun  7 12:02 pilotlog.txt
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas        95 Jun  7 12:02 pilot_heartbeat.json
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas    377511 Jun  7 12:02 log.45006595._057195.job.log.1
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas       357 Jun  7 12:02 output.list
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas       620 Jun  7 12:02 runtime_log
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas    757760 Jun  7 12:02 result.tar.gz
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas      8657 Jun  7 12:02 runtime_log.err
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas       658 Jun  7 12:02 oj8KDmhAAi7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm47nKDm5HoMYm.diag
[2025-06-07 12:02:35] -rw-r--r-- 1 boincer umatlas     21408 Jun  7 12:02 stderr.txt
[2025-06-07 12:02:35] HITS file was successfully produced:
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas 178865249 Jun  7 12:01 shared/HITS.pool.root.1
[2025-06-07 12:02:35]  *** Contents of shared directory: ***
[2025-06-07 12:02:35] total 387056
[2025-06-07 12:02:35] -rw-r--r-- 2 boincer umatlas 216152415 Jun  7 10:58 ATLAS.root_0
[2025-06-07 12:02:35] -rw-r--r-- 2 boincer umatlas     15095 Jun  7 10:58 start_atlas.sh
[2025-06-07 12:02:35] -rw-r--r-- 2 boincer umatlas    541919 Jun  7 10:58 input.tar.gz
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas 178865249 Jun  7 12:01 HITS.pool.root.1
[2025-06-07 12:02:35] -rw------- 1 boincer umatlas    757760 Jun  7 12:02 result.tar.gz
12:02:37 (13318): run_atlas exited; CPU time 40827.047770
12:02:37 (13318): called boinc_finish(0)

</stderr_txt>
]]>

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