Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:37:43 (2741): wrapper (7.7.26015): starting
10:37:43 (2741): wrapper: running run_atlas (--nthreads 8)
[2025-06-07 10:37:43] Arguments: --nthreads 8
[2025-06-07 10:37:43] Threads: 8
[2025-06-07 10:37:43] Checking for CVMFS
[2025-06-07 10:37:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-07 10:37:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-07 10:37:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-07 10:37:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-07 10:37:44] 2.11.2.0 2876 23095 78656 146902 2 1 13708453 20275201 1 130560 0 8982834 99.982 3938481 4964 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-07 10:37:44] CVMFS is ok
[2025-06-07 10:37:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 10:37:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-07 10:37:44] Further information can be found at the LHC@home message board.
[2025-06-07 10:37:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 10:37:44] Checking for apptainer binary...
[2025-06-07 10:37:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-07 10:37:44] Running /usr/bin/apptainer --version
[2025-06-07 10:37:44] apptainer version 1.3.2-1.el7
[2025-06-07 10:37:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 10:37:46] c-204-5.aglt2.org
[2025-06-07 10:37:46] apptainer works
[2025-06-07 10:37:46] Set ATHENA_PROC_NUMBER=8
[2025-06-07 10:37:46] Set ATHENA_CORE_NUMBER=8
[2025-06-07 10:37:46] Starting ATLAS job with PandaID=6677380688
[2025-06-07 10:37:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 12:28:39]  *** The last 200 lines of the pilot log: ***
[2025-06-07 12:28:39] 2025-06-07 16:28:20,731 | INFO     | executing command: lscpu
[2025-06-07 12:28:39] 2025-06-07 16:28:20,762 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-07 12:28:39] 2025-06-07 16:28:21,717 | INFO     | monitor loop #490: job 0:6677380688 is in state 'finished'
[2025-06-07 12:28:39] 2025-06-07 16:28:21,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 12:28:39] 2025-06-07 16:28:24,221 | INFO     | monitor loop #491: job 0:6677380688 is in state 'finished'
[2025-06-07 12:28:39] 2025-06-07 16:28:24,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 12:28:39] 2025-06-07 16:28:26,494 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-07 12:28:39] 2025-06-07 16:28:26,495 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677380688/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 12:28:39] 2025-06-07 16:28:26,496 | INFO     | extracted standard info from prmon json
[2025-06-07 12:28:39] 2025-06-07 16:28:26,496 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 12:28:39] 2025-06-07 16:28:26,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 12:28:39] 2025-06-07 16:28:26,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 12:28:39] 2025-06-07 16:28:26,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 12:28:39] 2025-06-07 16:28:26,502 | INFO     | fitting pss+swap vs Time
[2025-06-07 12:28:39] 2025-06-07 16:28:26,503 | INFO     | sum of square deviations: 390582207.0
[2025-06-07 12:28:39] 2025-06-07 16:28:26,503 | INFO     | sum of deviations: -516272127.5000058
[2025-06-07 12:28:39] 2025-06-07 16:28:26,503 | INFO     | mean x: 1749310380.5
[2025-06-07 12:28:39] 2025-06-07 16:28:26,503 | INFO     | mean y: 2529930.324074074
[2025-06-07 12:28:39] 2025-06-07 16:28:26,504 | INFO     | -- intersect: 2314770927.5146594
[2025-06-07 12:28:39] 2025-06-07 16:28:26,504 | INFO     | intersect: 2314770927.5146594
[2025-06-07 12:28:39] 2025-06-07 16:28:26,504 | INFO     | chi2: 1.7044126733971188
[2025-06-07 12:28:39] 2025-06-07 16:28:26,504 | INFO     | sum of square deviations: 338804492.0
[2025-06-07 12:28:39] 2025-06-07 16:28:26,505 | INFO     | sum of deviations: -36654534.000004575
[2025-06-07 12:28:39] 2025-06-07 16:28:26,505 | INFO     | mean x: 1749310228.0
[2025-06-07 12:28:39] 2025-06-07 16:28:26,505 | INFO     | mean y: 2531343.990291262
[2025-06-07 12:28:39] 2025-06-07 16:28:26,505 | INFO     | -- intersect: 191785479.46610352
[2025-06-07 12:28:39] 2025-06-07 16:28:26,505 | INFO     | intersect: 191785479.46610352
[2025-06-07 12:28:39] 2025-06-07 16:28:26,506 | INFO     | chi2: 1.706834676360514
[2025-06-07 12:28:39] 2025-06-07 16:28:26,506 | INFO     | current chi2=1.706834676360514 (change=-0.14210191001266498 %)
[2025-06-07 12:28:39] 2025-06-07 16:28:26,506 | INFO     | right removable region: 102
[2025-06-07 12:28:39] 2025-06-07 16:28:26,506 | INFO     | sum of square deviations: 338804492.0
[2025-06-07 12:28:39] 2025-06-07 16:28:26,507 | INFO     | sum of deviations: -17399901690.0
[2025-06-07 12:28:39] 2025-06-07 16:28:26,507 | INFO     | mean x: 1749310533.0
[2025-06-07 12:28:39] 2025-06-07 16:28:26,507 | INFO     | mean y: 2578624.9126213593
[2025-06-07 12:28:39] 2025-06-07 16:28:26,507 | INFO     | -- intersect: 89841503486.27928
[2025-06-07 12:28:39] 2025-06-07 16:28:26,507 | INFO     | intersect: 89841503486.27928
[2025-06-07 12:28:39] 2025-06-07 16:28:26,507 | INFO     | chi2: 0.11859477497982741
[2025-06-07 12:28:39] 2025-06-07 16:28:26,507 | INFO     | current chi2=0.11859477497982741 (change=93.04189784370398 %)
[2025-06-07 12:28:39] 2025-06-07 16:28:26,508 | INFO     | sum of square deviations: 291817564.5
[2025-06-07 12:28:39] 2025-06-07 16:28:26,508 | INFO     | sum of deviations: -16108364123.0
[2025-06-07 12:28:39] 2025-06-07 16:28:26,508 | INFO     | mean x: 1749310685.5
[2025-06-07 12:28:39] 2025-06-07 16:28:26,508 | INFO     | mean y: 2574291.93877551
[2025-06-07 12:28:39] 2025-06-07 16:28:26,509 | INFO     | -- intersect: 96564731318.26382
[2025-06-07 12:28:39] 2025-06-07 16:28:26,509 | INFO     | intersect: 96564731318.26382
[2025-06-07 12:28:39] 2025-06-07 16:28:26,509 | INFO     | chi2: 0.10405523510662743
[2025-06-07 12:28:39] 2025-06-07 16:28:26,509 | INFO     | current chi2=0.10405523510662743 (change=12.259848611098692 %)
[2025-06-07 12:28:39] 2025-06-07 16:28:26,509 | INFO     | left removable region: 20
[2025-06-07 12:28:39] 2025-06-07 16:28:26,509 | INFO     | sum of square deviations: 170944600.5
[2025-06-07 12:28:39] 2025-06-07 16:28:26,510 | INFO     | sum of deviations: -9340830021.0
[2025-06-07 12:28:39] 2025-06-07 16:28:26,510 | INFO     | mean x: 1749310807.5
[2025-06-07 12:28:39] 2025-06-07 16:28:26,510 | INFO     | mean y: 2555316.7560975607
[2025-06-07 12:28:39] 2025-06-07 16:28:26,510 | INFO     | -- intersect: 95589165592.61417
[2025-06-07 12:28:39] 2025-06-07 16:28:26,510 | INFO     | intersect: 95589165592.61417
[2025-06-07 12:28:39] 2025-06-07 16:28:26,510 | INFO     | chi2: 0.09200832379865176
[2025-06-07 12:28:39] 2025-06-07 16:28:26,511 | INFO     | -- intersect: 95589165592.61417
[2025-06-07 12:28:39] 2025-06-07 16:28:26,511 | INFO     | current memory leak: -54.64 B/s (using 82 data points, chi2=0.09)
[2025-06-07 12:28:39] 2025-06-07 16:28:26,511 | INFO     | ..............................
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | . Timing measurements:
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | . get job = 0 s
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | . initial setup = 2 s
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | . payload setup = 11 s
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | . stage-in = 0 s
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | . payload execution = 6580 s
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | . stage-out = 0 s
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | . log creation = 0 s
[2025-06-07 12:28:39] 2025-06-07 16:28:26,512 | INFO     | ..............................
[2025-06-07 12:28:39] 2025-06-07 16:28:27,084 | INFO     | 
[2025-06-07 12:28:39] 2025-06-07 16:28:27,084 | INFO     | job summary report
[2025-06-07 12:28:39] 2025-06-07 16:28:27,085 | INFO     | --------------------------------------------------
[2025-06-07 12:28:39] 2025-06-07 16:28:27,085 | INFO     | PanDA job id: 6677380688
[2025-06-07 12:28:39] 2025-06-07 16:28:27,085 | INFO     | task id: 45006595
[2025-06-07 12:28:39] 2025-06-07 16:28:27,085 | INFO     | errors: (none)
[2025-06-07 12:28:39] 2025-06-07 16:28:27,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 12:28:39] 2025-06-07 16:28:27,086 | INFO     | pilot state: finished 
[2025-06-07 12:28:39] 2025-06-07 16:28:27,086 | INFO     | transexitcode: 0
[2025-06-07 12:28:39] 2025-06-07 16:28:27,086 | INFO     | exeerrorcode: 0
[2025-06-07 12:28:39] 2025-06-07 16:28:27,086 | INFO     | exeerrordiag: 
[2025-06-07 12:28:39] 2025-06-07 16:28:27,086 | INFO     | exitcode: 0
[2025-06-07 12:28:39] 2025-06-07 16:28:27,086 | INFO     | exitmsg: OK
[2025-06-07 12:28:39] 2025-06-07 16:28:27,087 | INFO     | cpuconsumptiontime: 49015 s
[2025-06-07 12:28:39] 2025-06-07 16:28:27,087 | INFO     | nevents: 400
[2025-06-07 12:28:39] 2025-06-07 16:28:27,087 | INFO     | neventsw: 0
[2025-06-07 12:28:39] 2025-06-07 16:28:27,087 | INFO     | pid: 12973
[2025-06-07 12:28:39] 2025-06-07 16:28:27,087 | INFO     | pgrp: 12973
[2025-06-07 12:28:39] 2025-06-07 16:28:27,087 | INFO     | corecount: 8
[2025-06-07 12:28:39] 2025-06-07 16:28:27,088 | INFO     | event service: False
[2025-06-07 12:28:39] 2025-06-07 16:28:27,088 | INFO     | sizes: {0: 2397334, 6: 2397540, 11: 2397568, 6595: 2424464, 6596: 2433405, 6597: 2433461, 6606: 2433759}
[2025-06-07 12:28:39] 2025-06-07 16:28:27,088 | INFO     | --------------------------------------------------
[2025-06-07 12:28:39] 2025-06-07 16:28:27,088 | INFO     | 
[2025-06-07 12:28:39] 2025-06-07 16:28:27,088 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-07 12:28:39] 2025-06-07 16:28:27,116 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,117 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,119 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 12:28:39] 2025-06-07 16:28:27,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 12:28:39] 2025-06-07 16:28:27,121 | INFO     | job 6677380688 has completed (purged errors)
[2025-06-07 12:28:39] 2025-06-07 16:28:27,121 | INFO     | overall cleanup function is called
[2025-06-07 12:28:39] 2025-06-07 16:28:28,129 | INFO     | --- collectZombieJob: --- 10, [12973]
[2025-06-07 12:28:39] 2025-06-07 16:28:28,130 | INFO     | zombie collector waiting for pid 12973
[2025-06-07 12:28:39] 2025-06-07 16:28:28,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 12:28:39] 2025-06-07 16:28:28,130 | INFO     | collected zombie processes
[2025-06-07 12:28:39] 2025-06-07 16:28:28,130 | INFO     | will attempt to kill all subprocesses of pid=12973
[2025-06-07 12:28:39] 2025-06-07 16:28:28,241 | INFO     | process IDs to be killed: [12973] (in reverse order)
[2025-06-07 12:28:39] 2025-06-07 16:28:28,295 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 12:28:39] 2025-06-07 16:28:28,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 12:28:39] 2025-06-07 16:28:28,301 | INFO     | did not find any defunct processes belonging to 12973
[2025-06-07 12:28:39] 2025-06-07 16:28:28,304 | INFO     | did not find any defunct processes belonging to 12973
[2025-06-07 12:28:39] 2025-06-07 16:28:28,305 | INFO     | ready for new job
[2025-06-07 12:28:39] 2025-06-07 16:28:28,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 12:28:39] 2025-06-07 16:28:28,307 | INFO     | **************************************
[2025-06-07 12:28:39] 2025-06-07 16:28:28,307 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-07 12:28:39] 2025-06-07 16:28:28,307 | INFO     | **************************************
[2025-06-07 12:28:39] 2025-06-07 16:28:28,307 | INFO     | 
[2025-06-07 12:28:39] 2025-06-07 16:28:28,308 | INFO     | architecture information:
[2025-06-07 12:28:39] 2025-06-07 16:28:28,309 | INFO     | executing command: cat /etc/os-release
[2025-06-07 12:28:39] 2025-06-07 16:28:28,325 | INFO     | cat /etc/os-release:
[2025-06-07 12:28:39] NAME="CentOS Linux"
[2025-06-07 12:28:39] VERSION="7 (Core)"
[2025-06-07 12:28:39] ID="centos"
[2025-06-07 12:28:39] ID_LIKE="rhel fedora"
[2025-06-07 12:28:39] VERSION_ID="7"
[2025-06-07 12:28:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 12:28:39] ANSI_COLOR="0;31"
[2025-06-07 12:28:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 12:28:39] HOME_URL="https://www.centos.org/"
[2025-06-07 12:28:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 12:28:39] 
[2025-06-07 12:28:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 12:28:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 12:28:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 12:28:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 12:28:39] 
[2025-06-07 12:28:39] 2025-06-07 16:28:28,326 | INFO     | **************************************
[2025-06-07 12:28:39] 2025-06-07 16:28:28,829 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-07 12:28:39] 2025-06-07 16:28:28,848 | INFO     | sufficient remaining disk space (18640535552 B)
[2025-06-07 12:28:39] 2025-06-07 16:28:28,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 12:28:39] 2025-06-07 16:28:28,849 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 12:28:39] 2025-06-07 16:28:28,849 | INFO     | update_server=False
[2025-06-07 12:28:39] 2025-06-07 16:28:28,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 12:28:39] 2025-06-07 16:28:28,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 12:28:39] 2025-06-07 16:28:28,909 | INFO     | all job control threads have been joined
[2025-06-07 12:28:39] 2025-06-07 16:28:29,228 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-07 12:28:39] 2025-06-07 16:28:29,230 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-07 12:28:39] 2025-06-07 16:28:29,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 12:28:39] 2025-06-07 16:28:29,230 | INFO     | will abort loop
[2025-06-07 12:28:39] 2025-06-07 16:28:29,441 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 12:28:39] 2025-06-07 16:28:29,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 12:28:39] 2025-06-07 16:28:29,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 12:28:39] 2025-06-07 16:28:29,515 | INFO     | all data control threads have been joined
[2025-06-07 12:28:39] 2025-06-07 16:28:29,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 12:28:39] 2025-06-07 16:28:29,667 | INFO     | all payload control threads have been joined
[2025-06-07 12:28:39] 2025-06-07 16:28:29,851 | INFO     | [job] retrieve thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:29,915 | INFO     | [job] control thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:29,955 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:29,972 | INFO     | [job] validate thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:30,055 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:30,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:30,062 | INFO     | [data] copytool_in thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:30,191 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:30,235 | INFO     | [job] job monitor thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:30,517 | INFO     | [data] control thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:30,672 | INFO     | [payload] control thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:30,971 | INFO     | [payload] validate_post thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:31,124 | INFO     | [payload] failed_post thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:31,583 | INFO     | [data] copytool_out thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:31,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 12:28:39] 2025-06-07 16:28:32,638 | INFO     | [job] queue monitor thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:32,853 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 12:28:39] 2025-06-07 16:28:33,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703783061312)>', '<ExcThread(monitor, started 139703055537920)>']
[2025-06-07 12:28:39] 2025-06-07 16:28:34,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 12:28:39] 2025-06-07 16:28:34,468 | INFO     | [monitor] control thread has ended
[2025-06-07 12:28:39] 2025-06-07 16:28:38,724 | INFO     | all workflow threads have been joined
[2025-06-07 12:28:39] 2025-06-07 16:28:38,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 12:28:39] 2025-06-07 16:28:38,725 | INFO     | traces error code: 0
[2025-06-07 12:28:39] 2025-06-07 16:28:38,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 12:28:39] 2025-06-07 16:28:38,847 [wrapper] ==== pilot stdout END ====
[2025-06-07 12:28:39] 2025-06-07 16:28:38,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 12:28:39] 2025-06-07 16:28:38,856 [wrapper] pilotpid: 6452
[2025-06-07 12:28:39] 2025-06-07 16:28:38,860 [wrapper] Pilot exit status: 0
[2025-06-07 12:28:39] 2025-06-07 16:28:38,877 [wrapper] pandaids: 6677380688
[2025-06-07 12:28:39] 2025-06-07 16:28:38,918 [wrapper] cleanup supervisor_pilot   469 6453
[2025-06-07 12:28:39] 2025-06-07 16:28:38,922 [wrapper] Test setup, not cleaning
[2025-06-07 12:28:39] 2025-06-07 16:28:38,926 [wrapper] apfmon messages muted
[2025-06-07 12:28:39] 2025-06-07 16:28:38,931 [wrapper] ==== wrapper stdout END ====
[2025-06-07 12:28:39] 2025-06-07 16:28:38,935 [wrapper] ==== wrapper stderr END ====
[2025-06-07 12:28:39]  *** Error codes and diagnostics ***
[2025-06-07 12:28:39]     "exeErrorCode": 0,
[2025-06-07 12:28:39]     "exeErrorDiag": "",
[2025-06-07 12:28:39]     "pilotErrorCode": 0,
[2025-06-07 12:28:39]     "pilotErrorDiag": "",
[2025-06-07 12:28:39]  *** Listing of results directory ***
[2025-06-07 12:28:39] total 391776
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas    495897 Jun  2 11:48 pilot3.tar.gz
[2025-06-07 12:28:39] -rwx------ 1 boincer umatlas     37140 Jun  2 11:51 runpilot2-wrapper.sh
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas      5111 Jun  2 11:53 queuedata.json
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas       100 Jun  7 10:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 12:28:39] -rwxr-xr-x 1 boincer umatlas      7986 Jun  7 10:37 run_atlas
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas       105 Jun  7 10:37 job.xml
[2025-06-07 12:28:39] -rw-r--r-- 2 boincer umatlas 215545773 Jun  7 10:37 EVNT.45006593._000093.pool.root.1
[2025-06-07 12:28:39] drwxrwx--x 2 boincer umatlas      4096 Jun  7 10:37 shared
[2025-06-07 12:28:39] -rw-r--r-- 2 boincer umatlas    508875 Jun  7 10:37 input.tar.gz
[2025-06-07 12:28:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  7 10:37 start_atlas.sh
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas         0 Jun  7 10:37 boinc_lockfile
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas      2521 Jun  7 10:37 pandaJob.out
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas    985748 Jun  7 10:38 agis_schedconf.cvmfs.json
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas   1598969 Jun  7 10:38 agis_ddmendpoints.agis.ALL.json
[2025-06-07 12:28:39] drwx------ 4 boincer umatlas      4096 Jun  7 10:38 pilot3
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas      5824 Jun  7 12:19 init_data.xml
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas        95 Jun  7 12:27 pilot_heartbeat.json
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas 179935894 Jun  7 12:27 HITS.45006595._002320.pool.root.1
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas      1049 Jun  7 12:28 memory_monitor_summary.json
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas    326030 Jun  7 12:28 log.45006595._002320.job.log.tgz.1
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas        27 Jun  7 12:28 wrapper_checkpoint.txt
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas      8192 Jun  7 12:28 boinc_mmap_file
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas       529 Jun  7 12:28 boinc_task_state.xml
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas      7745 Jun  7 12:28 heartbeat.json
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas      4539 Jun  7 12:28 pilotlog.txt
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas    609259 Jun  7 12:28 log.45006595._002320.job.log.1
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas       357 Jun  7 12:28 output.list
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas       620 Jun  7 12:28 runtime_log
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas    952320 Jun  7 12:28 result.tar.gz
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas      8654 Jun  7 12:28 runtime_log.err
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas       657 Jun  7 12:28 AVFNDm2cMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3AfKDmtaYyGo.diag
[2025-06-07 12:28:39] -rw-r--r-- 1 boincer umatlas     21061 Jun  7 12:28 stderr.txt
[2025-06-07 12:28:39] HITS file was successfully produced:
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas 179935894 Jun  7 12:27 shared/HITS.pool.root.1
[2025-06-07 12:28:39]  *** Contents of shared directory: ***
[2025-06-07 12:28:39] total 387668
[2025-06-07 12:28:39] -rw-r--r-- 2 boincer umatlas 215545773 Jun  7 10:37 ATLAS.root_0
[2025-06-07 12:28:39] -rw-r--r-- 2 boincer umatlas    508875 Jun  7 10:37 input.tar.gz
[2025-06-07 12:28:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  7 10:37 start_atlas.sh
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas 179935894 Jun  7 12:27 HITS.pool.root.1
[2025-06-07 12:28:39] -rw------- 1 boincer umatlas    952320 Jun  7 12:28 result.tar.gz
12:28:40 (2741): run_atlas exited; CPU time 48960.005432
12:28:40 (2741): called boinc_finish(0)

</stderr_txt>
]]>

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