Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:38:34 (17394): wrapper (7.7.26015): starting
03:38:34 (17394): wrapper: running run_atlas (--nthreads 10)
[2025-06-07 03:38:34] Arguments: --nthreads 10
[2025-06-07 03:38:34] Threads: 10
[2025-06-07 03:38:34] Checking for CVMFS
[2025-06-07 03:38:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-07 03:38:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-07 03:38:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-07 03:38:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-07 03:38:35] 2.11.2.0 21479 72988 455228 146891 2 257 12250396 18432000 9922 130560 0 117205076 98.645 343450571 36910 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-07 03:38:35] CVMFS is ok
[2025-06-07 03:38:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 03:38:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-07 03:38:35] Further information can be found at the LHC@home message board.
[2025-06-07 03:38:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 03:38:35] Checking for apptainer binary...
[2025-06-07 03:38:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-07 03:38:35] Running /usr/bin/apptainer --version
[2025-06-07 03:38:35] apptainer version 1.3.2-1.el7
[2025-06-07 03:38:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 03:38:38] c-211-24.aglt2.org
[2025-06-07 03:38:38] apptainer works
[2025-06-07 03:38:38] Set ATHENA_PROC_NUMBER=10
[2025-06-07 03:38:38] Set ATHENA_CORE_NUMBER=10
[2025-06-07 03:38:38] Starting ATLAS job with PandaID=6669088905
[2025-06-07 03:38:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 09:08:22]  *** The last 200 lines of the pilot log: ***
[2025-06-07 09:08:22] 2025-06-07 13:07:47,375 | INFO     | .. there are 13 such processes running
[2025-06-07 09:08:22] 2025-06-07 13:07:49,169 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-07 09:08:22] 2025-06-07 13:07:49,178 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9320000000002
[2025-06-07 09:08:22] 2025-06-07 13:07:49,186 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669088905/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,187 | INFO     | extracted standard info from prmon json
[2025-06-07 09:08:22] 2025-06-07 13:07:49,187 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 09:08:22] 2025-06-07 13:07:49,187 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 09:08:22] 2025-06-07 13:07:49,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 09:08:22] 2025-06-07 13:07:49,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 09:08:22] 2025-06-07 13:07:49,197 | INFO     | fitting pss+swap vs Time
[2025-06-07 09:08:22] 2025-06-07 13:07:49,197 | INFO     | sum of square deviations: 10449436809.04644
[2025-06-07 09:08:22] 2025-06-07 13:07:49,201 | INFO     | sum of deviations: 32845703011.14863
[2025-06-07 09:08:22] 2025-06-07 13:07:49,202 | INFO     | mean x: 1749291791.123839
[2025-06-07 09:08:22] 2025-06-07 13:07:49,202 | INFO     | mean y: 2584497.39628483
[2025-06-07 09:08:22] 2025-06-07 13:07:49,202 | INFO     | -- intersect: -5495962429.204733
[2025-06-07 09:08:22] 2025-06-07 13:07:49,202 | INFO     | intersect: -5495962429.204733
[2025-06-07 09:08:22] 2025-06-07 13:07:49,203 | INFO     | chi2: 1.8477569392621924
[2025-06-07 09:08:22] 2025-06-07 13:07:49,203 | INFO     | sum of square deviations: 9971663306.468506
[2025-06-07 09:08:22] 2025-06-07 13:07:49,207 | INFO     | sum of deviations: 32081058864.421383
[2025-06-07 09:08:22] 2025-06-07 13:07:49,207 | INFO     | mean x: 1749291638.625786
[2025-06-07 09:08:22] 2025-06-07 13:07:49,207 | INFO     | mean y: 2584253.3144654087
[2025-06-07 09:08:22] 2025-06-07 13:07:49,207 | INFO     | -- intersect: -5625276044.915834
[2025-06-07 09:08:22] 2025-06-07 13:07:49,207 | INFO     | intersect: -5625276044.915834
[2025-06-07 09:08:22] 2025-06-07 13:07:49,208 | INFO     | chi2: 1.8482403310589806
[2025-06-07 09:08:22] 2025-06-07 13:07:49,208 | INFO     | current chi2=1.8482403310589806 (change=-0.026161005623453536 %)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,208 | INFO     | right removable region: 317
[2025-06-07 09:08:22] 2025-06-07 13:07:49,209 | INFO     | sum of square deviations: 9971638906.468508
[2025-06-07 09:08:22] 2025-06-07 13:07:49,212 | INFO     | sum of deviations: -25742029017.578613
[2025-06-07 09:08:22] 2025-06-07 13:07:49,213 | INFO     | mean x: 1749291943.625786
[2025-06-07 09:08:22] 2025-06-07 13:07:49,213 | INFO     | mean y: 2603089.3144654087
[2025-06-07 09:08:22] 2025-06-07 13:07:49,213 | INFO     | -- intersect: 4518442902.148115
[2025-06-07 09:08:22] 2025-06-07 13:07:49,213 | INFO     | intersect: 4518442902.148115
[2025-06-07 09:08:22] 2025-06-07 13:07:49,214 | INFO     | chi2: 0.21883865511795042
[2025-06-07 09:08:22] 2025-06-07 13:07:49,214 | INFO     | current chi2=0.21883865511795042 (change=88.15652370352713 %)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,214 | INFO     | sum of square deviations: 9508631978.888233
[2025-06-07 09:08:22] 2025-06-07 13:07:49,218 | INFO     | sum of deviations: -34827368361.00955
[2025-06-07 09:08:22] 2025-06-07 13:07:49,218 | INFO     | mean x: 1749292096.1277955
[2025-06-07 09:08:22] 2025-06-07 13:07:49,218 | INFO     | mean y: 2606081.725239617
[2025-06-07 09:08:22] 2025-06-07 13:07:49,218 | INFO     | -- intersect: 6409757009.231062
[2025-06-07 09:08:22] 2025-06-07 13:07:49,218 | INFO     | intersect: 6409757009.231062
[2025-06-07 09:08:22] 2025-06-07 13:07:49,219 | INFO     | chi2: 0.1827300496288736
[2025-06-07 09:08:22] 2025-06-07 13:07:49,219 | INFO     | current chi2=0.1827300496288736 (change=16.500103909711417 %)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,219 | INFO     | left removable region: 20
[2025-06-07 09:08:22] 2025-06-07 13:07:49,220 | INFO     | sum of square deviations: 8123725554.612817
[2025-06-07 09:08:22] 2025-06-07 13:07:49,222 | INFO     | sum of deviations: -16254510693.666662
[2025-06-07 09:08:22] 2025-06-07 13:07:49,223 | INFO     | mean x: 1749292218.13468
[2025-06-07 09:08:22] 2025-06-07 13:07:49,223 | INFO     | mean y: 2599628.6666666665
[2025-06-07 09:08:22] 2025-06-07 13:07:49,223 | INFO     | -- intersect: 3502704214.2865844
[2025-06-07 09:08:22] 2025-06-07 13:07:49,223 | INFO     | intersect: 3502704214.2865844
[2025-06-07 09:08:22] 2025-06-07 13:07:49,224 | INFO     | chi2: 0.14016880676314109
[2025-06-07 09:08:22] 2025-06-07 13:07:49,224 | INFO     | -- intersect: 3502704214.2865844
[2025-06-07 09:08:22] 2025-06-07 13:07:49,224 | INFO     | current memory leak: -2.00 B/s (using 297 data points, chi2=0.14)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,225 | INFO     | could have reported an average CPU frequency of 2899 MHz (14 samples)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,225 | INFO     | ..............................
[2025-06-07 09:08:22] 2025-06-07 13:07:49,225 | INFO     | . Timing measurements:
[2025-06-07 09:08:22] 2025-06-07 13:07:49,225 | INFO     | . get job = 0 s
[2025-06-07 09:08:22] 2025-06-07 13:07:49,225 | INFO     | . initial setup = 2 s
[2025-06-07 09:08:22] 2025-06-07 13:07:49,226 | INFO     | . payload setup = 11 s
[2025-06-07 09:08:22] 2025-06-07 13:07:49,226 | INFO     | . stage-in = 0 s
[2025-06-07 09:08:22] 2025-06-07 13:07:49,226 | INFO     | . payload execution = 19691 s
[2025-06-07 09:08:22] 2025-06-07 13:07:49,226 | INFO     | . stage-out = 2 s
[2025-06-07 09:08:22] 2025-06-07 13:07:49,226 | INFO     | . log creation = 0 s
[2025-06-07 09:08:22] 2025-06-07 13:07:49,226 | INFO     | ..............................
[2025-06-07 09:08:22] 2025-06-07 13:07:49,365 | INFO     | 
[2025-06-07 09:08:22] 2025-06-07 13:07:49,366 | INFO     | job summary report
[2025-06-07 09:08:22] 2025-06-07 13:07:49,366 | INFO     | --------------------------------------------------
[2025-06-07 09:08:22] 2025-06-07 13:07:49,366 | INFO     | PanDA job id: 6669088905
[2025-06-07 09:08:22] 2025-06-07 13:07:49,366 | INFO     | task id: 44871837
[2025-06-07 09:08:22] 2025-06-07 13:07:49,366 | INFO     | errors: (none)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 09:08:22] 2025-06-07 13:07:49,366 | INFO     | pilot state: finished 
[2025-06-07 09:08:22] 2025-06-07 13:07:49,366 | INFO     | transexitcode: 0
[2025-06-07 09:08:22] 2025-06-07 13:07:49,367 | INFO     | exeerrorcode: 0
[2025-06-07 09:08:22] 2025-06-07 13:07:49,367 | INFO     | exeerrordiag: 
[2025-06-07 09:08:22] 2025-06-07 13:07:49,367 | INFO     | exitcode: 0
[2025-06-07 09:08:22] 2025-06-07 13:07:49,367 | INFO     | exitmsg: OK
[2025-06-07 09:08:22] 2025-06-07 13:07:49,367 | INFO     | cpuconsumptiontime: 104720 s
[2025-06-07 09:08:22] 2025-06-07 13:07:49,367 | INFO     | nevents: 400
[2025-06-07 09:08:22] 2025-06-07 13:07:49,367 | INFO     | neventsw: 0
[2025-06-07 09:08:22] 2025-06-07 13:07:49,367 | INFO     | pid: 28662
[2025-06-07 09:08:22] 2025-06-07 13:07:49,368 | INFO     | pgrp: 28662
[2025-06-07 09:08:22] 2025-06-07 13:07:49,368 | INFO     | corecount: 10
[2025-06-07 09:08:22] 2025-06-07 13:07:49,368 | INFO     | event service: False
[2025-06-07 09:08:22] 2025-06-07 13:07:49,368 | INFO     | sizes: {0: 2397562, 1: 2397761, 6: 2398023, 12: 2398051, 19706: 2431202, 19709: 2440143, 19710: 2440327, 19719: 2440521}
[2025-06-07 09:08:22] 2025-06-07 13:07:49,368 | INFO     | --------------------------------------------------
[2025-06-07 09:08:22] 2025-06-07 13:07:49,368 | INFO     | 
[2025-06-07 09:08:22] 2025-06-07 13:07:49,368 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-07 09:08:22] 2025-06-07 13:07:49,403 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,403 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,403 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,403 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,406 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,406 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 09:08:22] 2025-06-07 13:07:49,407 | INFO     | job 6669088905 has completed (purged errors)
[2025-06-07 09:08:22] 2025-06-07 13:07:49,407 | INFO     | overall cleanup function is called
[2025-06-07 09:08:22] 2025-06-07 13:07:50,417 | INFO     | --- collectZombieJob: --- 10, [28662]
[2025-06-07 09:08:22] 2025-06-07 13:07:50,417 | INFO     | zombie collector waiting for pid 28662
[2025-06-07 09:08:22] 2025-06-07 13:07:50,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 09:08:22] 2025-06-07 13:07:50,418 | INFO     | collected zombie processes
[2025-06-07 09:08:22] 2025-06-07 13:07:50,418 | INFO     | will attempt to kill all subprocesses of pid=28662
[2025-06-07 09:08:22] 2025-06-07 13:07:50,855 | INFO     | process IDs to be killed: [28662] (in reverse order)
[2025-06-07 09:08:22] 2025-06-07 13:07:51,049 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 09:08:22] 2025-06-07 13:07:51,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 09:08:22] 2025-06-07 13:07:51,060 | INFO     | did not find any defunct processes belonging to 28662
[2025-06-07 09:08:22] 2025-06-07 13:07:51,072 | INFO     | did not find any defunct processes belonging to 28662
[2025-06-07 09:08:22] 2025-06-07 13:07:51,073 | INFO     | ready for new job
[2025-06-07 09:08:22] 2025-06-07 13:07:51,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 09:08:22] 2025-06-07 13:07:51,076 | INFO     | ***************************************
[2025-06-07 09:08:22] 2025-06-07 13:07:51,077 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-07 09:08:22] 2025-06-07 13:07:51,077 | INFO     | ***************************************
[2025-06-07 09:08:22] 2025-06-07 13:07:51,077 | INFO     | 
[2025-06-07 09:08:22] 2025-06-07 13:07:51,080 | INFO     | architecture information:
[2025-06-07 09:08:22] 2025-06-07 13:07:51,081 | INFO     | executing command: cat /etc/os-release
[2025-06-07 09:08:22] 2025-06-07 13:07:51,098 | INFO     | cat /etc/os-release:
[2025-06-07 09:08:22] NAME="CentOS Linux"
[2025-06-07 09:08:22] VERSION="7 (Core)"
[2025-06-07 09:08:22] ID="centos"
[2025-06-07 09:08:22] ID_LIKE="rhel fedora"
[2025-06-07 09:08:22] VERSION_ID="7"
[2025-06-07 09:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 09:08:22] ANSI_COLOR="0;31"
[2025-06-07 09:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 09:08:22] HOME_URL="https://www.centos.org/"
[2025-06-07 09:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 09:08:22] 
[2025-06-07 09:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 09:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 09:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 09:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 09:08:22] 
[2025-06-07 09:08:22] 2025-06-07 13:07:51,099 | INFO     | ***************************************
[2025-06-07 09:08:22] 2025-06-07 13:07:51,602 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-07 09:08:22] 2025-06-07 13:07:51,676 | INFO     | sufficient remaining disk space (57588842496 B)
[2025-06-07 09:08:22] 2025-06-07 13:07:51,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 09:08:22] 2025-06-07 13:07:51,676 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 09:08:22] 2025-06-07 13:07:51,676 | INFO     | update_server=False
[2025-06-07 09:08:22] 2025-06-07 13:07:51,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 09:08:22] 2025-06-07 13:07:51,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 09:08:22] 2025-06-07 13:07:51,729 | INFO     | all job control threads have been joined
[2025-06-07 09:08:22] 2025-06-07 13:07:51,790 | INFO     | all data control threads have been joined
[2025-06-07 09:08:22] 2025-06-07 13:07:51,889 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-07 09:08:22] 2025-06-07 13:07:51,889 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-07 09:08:22] 2025-06-07 13:07:51,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 09:08:22] 2025-06-07 13:07:51,890 | INFO     | will abort loop
[2025-06-07 09:08:22] 2025-06-07 13:07:52,091 | INFO     | all payload control threads have been joined
[2025-06-07 09:08:22] 2025-06-07 13:07:52,682 | INFO     | [job] retrieve thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:52,721 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:52,735 | INFO     | [job] control thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:52,737 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:52,796 | INFO     | [data] control thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:52,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 09:08:22] 2025-06-07 13:07:52,896 | INFO     | [job] job monitor thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:53,097 | INFO     | [payload] control thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:53,552 | INFO     | [payload] failed_post thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:53,675 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:53,808 | INFO     | [payload] validate_post thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:53,845 | INFO     | [job] validate thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:54,178 | INFO     | [data] copytool_in thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:54,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 09:08:22] 2025-06-07 13:07:54,815 | INFO     | [data] copytool_out thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:55,383 | INFO     | [job] queue monitor thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:07:55,684 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:08:01,897 | INFO     | job.realtimelogging is not enabled
[2025-06-07 09:08:22] 2025-06-07 13:08:02,902 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 09:08:22] 2025-06-07 13:08:04,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310847502144)>', '<ExcThread(monitor, started 140310273324800)>']
[2025-06-07 09:08:22] 2025-06-07 13:08:09,655 | INFO     | all workflow threads have been joined
[2025-06-07 09:08:22] 2025-06-07 13:08:09,655 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 09:08:22] 2025-06-07 13:08:09,656 | INFO     | traces error code: 0
[2025-06-07 09:08:22] 2025-06-07 13:08:09,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 09:08:22] 2025-06-07 13:08:21,849 | INFO     | PID=21507 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-07 09:08:22] 2025-06-07 13:08:21,849 | INFO     | .. there are 13 such processes running
[2025-06-07 09:08:22] 2025-06-07 13:08:21,850 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 09:08:22] 2025-06-07 13:08:21,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 09:08:22] 2025-06-07 13:08:21,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 09:08:22] 2025-06-07 13:08:21,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 09:08:22] 2025-06-07 13:08:21,851 | INFO     | [monitor] control thread has ended
[2025-06-07 09:08:22] 2025-06-07 13:08:22,022 [wrapper] ==== pilot stdout END ====
[2025-06-07 09:08:22] 2025-06-07 13:08:22,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 09:08:22] 2025-06-07 13:08:22,064 [wrapper] pilotpid: 21507
[2025-06-07 09:08:22] 2025-06-07 13:08:22,068 [wrapper] Pilot exit status: 0
[2025-06-07 09:08:22] 2025-06-07 13:08:22,256 [wrapper] pandaids: 6669088905
[2025-06-07 09:08:22] 2025-06-07 13:08:22,541 [wrapper] cleanup supervisor_pilot 23183 21508
[2025-06-07 09:08:22] 2025-06-07 13:08:22,546 [wrapper] Test setup, not cleaning
[2025-06-07 09:08:22] 2025-06-07 13:08:22,549 [wrapper] apfmon messages muted
[2025-06-07 09:08:22] 2025-06-07 13:08:22,552 [wrapper] ==== wrapper stdout END ====
[2025-06-07 09:08:22] 2025-06-07 13:08:22,555 [wrapper] ==== wrapper stderr END ====
[2025-06-07 09:08:22]  *** Error codes and diagnostics ***
[2025-06-07 09:08:22]     "exeErrorCode": 0,
[2025-06-07 09:08:22]     "exeErrorDiag": "",
[2025-06-07 09:08:22]     "pilotErrorCode": 0,
[2025-06-07 09:08:22]     "pilotErrorDiag": "",
[2025-06-07 09:08:22]  *** Listing of results directory ***
[2025-06-07 09:08:22] total 417540
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas    529402 Jun  7 03:09 pilot3.tar.gz
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas      5112 Jun  7 03:38 queuedata.json
[2025-06-07 09:08:22] -rwx------ 1 boincer umatlas     37140 Jun  7 03:38 runpilot2-wrapper.sh
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas       100 Jun  7 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 09:08:22] -rwxr-xr-x 1 boincer umatlas      7986 Jun  7 03:38 run_atlas
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas       105 Jun  7 03:38 job.xml
[2025-06-07 09:08:22] -rw-r--r-- 2 boincer umatlas 225069313 Jun  7 03:38 EVNT.44871834._003609.pool.root.1
[2025-06-07 09:08:22] -rw-r--r-- 2 boincer umatlas     15095 Jun  7 03:38 start_atlas.sh
[2025-06-07 09:08:22] drwxrwx--x 2 boincer umatlas      4096 Jun  7 03:38 shared
[2025-06-07 09:08:22] -rw-r--r-- 2 boincer umatlas    541918 Jun  7 03:38 input.tar.gz
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas         0 Jun  7 03:38 boinc_lockfile
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas      2559 Jun  7 03:38 pandaJob.out
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas    985740 Jun  7 03:38 agis_schedconf.cvmfs.json
[2025-06-07 09:08:22] drwx------ 4 boincer umatlas      4096 Jun  7 03:38 pilot3
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas      6037 Jun  7 09:00 init_data.xml
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas 194148707 Jun  7 09:06 HITS.44871837._092833.pool.root.1
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas       531 Jun  7 09:06 boinc_task_state.xml
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas      1062 Jun  7 09:07 memory_monitor_summary.json
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas   1598969 Jun  7 09:07 agis_ddmendpoints.agis.ALL.json
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas    486263 Jun  7 09:07 log.44871837._092833.job.log.tgz.1
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas      7786 Jun  7 09:07 heartbeat.json
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas      8192 Jun  7 09:08 boinc_mmap_file
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas        29 Jun  7 09:08 wrapper_checkpoint.txt
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas        95 Jun  7 09:08 pilot_heartbeat.json
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas       821 Jun  7 09:08 pilotlog.txt
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas   1741326 Jun  7 09:08 log.44871837._092833.job.log.1
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas       357 Jun  7 09:08 output.list
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas       620 Jun  7 09:08 runtime_log
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas   2242560 Jun  7 09:08 result.tar.gz
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas      8663 Jun  7 09:08 runtime_log.err
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas       664 Jun  7 09:08 D82NDm6I3h7n9Rq4apOajLDm4fhM0noT9bVof3QYDmP6aKDmQKOZKn.diag
[2025-06-07 09:08:22] -rw-r--r-- 1 boincer umatlas     21139 Jun  7 09:08 stderr.txt
[2025-06-07 09:08:22] HITS file was successfully produced:
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas 194148707 Jun  7 09:06 shared/HITS.pool.root.1
[2025-06-07 09:08:22]  *** Contents of shared directory: ***
[2025-06-07 09:08:22] total 412140
[2025-06-07 09:08:22] -rw-r--r-- 2 boincer umatlas 225069313 Jun  7 03:38 ATLAS.root_0
[2025-06-07 09:08:22] -rw-r--r-- 2 boincer umatlas     15095 Jun  7 03:38 start_atlas.sh
[2025-06-07 09:08:22] -rw-r--r-- 2 boincer umatlas    541918 Jun  7 03:38 input.tar.gz
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas 194148707 Jun  7 09:06 HITS.pool.root.1
[2025-06-07 09:08:22] -rw------- 1 boincer umatlas   2242560 Jun  7 09:08 result.tar.gz
09:08:24 (17394): run_atlas exited; CPU time 105172.869757
09:08:24 (17394): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN