Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-07 12:59:25 (31044): Detected: vboxwrapper 26206
2025-06-07 12:59:25 (31044): Detected: BOINC client v8.0.2
2025-06-07 12:59:26 (31044): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-07 12:59:26 (31044): Successfully copied 'init_data.xml' to the shared directory.
2025-06-07 12:59:26 (31044): Create VM. (boinc_6d22d1895652fd4c, slot#14)
2025-06-07 12:59:27 (31044): Setting Memory Size for VM. (4400MB)
2025-06-07 12:59:27 (31044): Setting CPU Count for VM. (4)
2025-06-07 12:59:27 (31044): Setting Chipset Options for VM.
2025-06-07 12:59:28 (31044): Setting Graphics Controller Options for VM.
2025-06-07 12:59:28 (31044): Setting Boot Options for VM.
2025-06-07 12:59:28 (31044): Setting Network Configuration for NAT.
2025-06-07 12:59:28 (31044): Enabling VM Network Access.
2025-06-07 12:59:29 (31044): Disabling USB Support for VM.
2025-06-07 12:59:29 (31044): Disabling COM Port Support for VM.
2025-06-07 12:59:29 (31044): Disabling LPT Port Support for VM.
2025-06-07 12:59:29 (31044): Disabling Audio Support for VM.
2025-06-07 12:59:30 (31044): Disabling Clipboard Support for VM.
2025-06-07 12:59:30 (31044): Disabling Drag and Drop Support for VM.
2025-06-07 12:59:30 (31044): Adding storage controller(s) to VM.
2025-06-07 12:59:30 (31044): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-07 12:59:33 (31044): Adding VirtualBox Guest Additions to VM.
2025-06-07 12:59:34 (31044): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-07 12:59:34 (31044): forwarding host port 57756 to guest port 80
2025-06-07 12:59:34 (31044): Enabling remote desktop for VM.
2025-06-07 12:59:34 (31044): Required extension pack not installed, remote desktop not enabled.
2025-06-07 12:59:34 (31044): Enabling shared directory for VM.
2025-06-07 12:59:35 (31044): Starting VM using VBoxManage interface. (boinc_6d22d1895652fd4c, slot#14)
2025-06-07 12:59:39 (31044): Successfully started VM. (PID = '11908')
2025-06-07 12:59:39 (31044): Reporting VM Process ID to BOINC.
2025-06-07 12:59:39 (31044): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-07 12:59:39 (31044): Guest Log: CPUID EDX: 0x178bfbff
2025-06-07 12:59:39 (31044): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-07 12:59:39 (31044): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-07 12:59:39 (31044): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-07 12:59:39 (31044): Detected: Web Application Enabled (http://localhost:57756)
2025-06-07 12:59:39 (31044): Preference change detected
2025-06-07 12:59:39 (31044): Setting CPU throttle for VM. (100%)
2025-06-07 12:59:39 (31044): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-07 12:59:41 (31044): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-07 12:59:41 (31044): Guest Log: BIOS: Booting from Hard Disk...
2025-06-07 12:59:43 (31044): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-07 12:59:43 (31044): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-07 12:59:43 (31044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-07 12:59:47 (31044): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-07 12:59:47 (31044): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-07 12:59:50 (31044): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-07 12:59:50 (31044): Guest Log: 00:00:00.000131 main     Log opened 2025-06-07T12:59:49.028723000Z
2025-06-07 12:59:50 (31044): Guest Log: 00:00:00.000232 main     OS Product: Linux
2025-06-07 12:59:50 (31044): Guest Log: 00:00:00.000248 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-07 12:59:50 (31044): Guest Log: 00:00:00.000260 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-07 12:59:50 (31044): Guest Log: 00:00:00.000273 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-07 12:59:50 (31044): Guest Log: 00:00:00.000273 main     Process ID: 1308
2025-06-07 12:59:50 (31044): Guest Log: 00:00:00.000273 main     Package type: LINUX_64BITS_GENERIC
2025-06-07 12:59:50 (31044): Guest Log: 00:00:00.000650 main     5.2.32 r132073 started. Verbose level = 0
2025-06-07 12:59:51 (31044): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-07 12:59:51 (31044): Guest Log: [INFO] Mounting shared directory
2025-06-07 12:59:51 (31044): Guest Log: [INFO] Checking for init_data.xml
2025-06-07 12:59:53 (31044): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-07 12:59:53 (31044): Guest Log: [INFO] Detected branch: prod
2025-06-07 12:59:54 (31044): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-07 12:59:54 (31044): Guest Log: Copying input files
2025-06-07 12:59:55 (31044): Guest Log: Copied input files into RunAtlas.
2025-06-07 12:59:55 (31044): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-07 12:59:55 (31044): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-07 12:59:55 (31044): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-07 12:59:55 (31044): Guest Log: Further information can be found at the LHC@home message board.
2025-06-07 13:00:00 (31044): Guest Log: 00:00:10.002187 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 337 780 000ns (GuestNow=1 749 315 600 367 745 000 ns GuestLast=1 749 301 189 029 965 000 ns fSetTimeLastLoop=true )
2025-06-07 13:00:04 (31044): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-07 13:00:04 (31044): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-07 13:00:04 (31044): Guest Log: 2.6.3.0 1587 0 32184 146905 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-07 13:00:05 (31044): Guest Log: copied the webapp to /var/www
2025-06-07 13:00:05 (31044): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-07 13:00:05 (31044): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-07 13:00:05 (31044): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-07 13:00:05 (31044): Guest Log:  *** Starting ATLAS job. (PandaID=6666763279 taskID=44871837) ***
2025-06-07 14:39:51 (31044): Status Report: Elapsed Time: '6000.000000'
2025-06-07 14:39:51 (31044): Status Report: CPU Time: '22457.062500'
2025-06-07 15:15:22 (31044): Guest Log:  *** Job finished ***
2025-06-07 15:15:22 (31044): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:05,711 | INFO     | [data] queue_monitor thread has finished
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:09,306 | INFO     | job.realtimelogging is not enabled
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:10,308 | INFO     | [payload] run_realtimelog thread has finished
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:12,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039749310272)>', '<ExcThread(monitor, started 140038943794944)>']
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:13,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:13,271 | INFO     | [monitor] control thread has ended
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,392 | INFO     | all workflow threads have been joined
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,392 | INFO     | end of generic workflow (traces error code: 0)
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,392 | INFO     | traces error code: 0
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,487 [wrapper] ==== pilot stdout END ====
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,490 [wrapper] ==== wrapper stdout RESUME ====
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,494 [wrapper] pilotpid: 5898
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,497 [wrapper] Pilot exit status: 0
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:17,984 [wrapper] pandaids: 6666763279
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:18,003 [wrapper] cleanup supervisor_pilot  4952 5899
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:18,006 [wrapper] Test setup, not cleaning
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:18,009 [wrapper] apfmon messages muted
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:18,011 [wrapper] ==== wrapper stdout END ====
2025-06-07 15:15:22 (31044): Guest Log: 2025-06-07 19:15:18,014 [wrapper] ==== wrapper stderr END ====
2025-06-07 15:15:22 (31044): Guest Log:  *** Error codes and diagnostics ***
2025-06-07 15:15:22 (31044): Guest Log:     "exeErrorCode": 0,
2025-06-07 15:15:22 (31044): Guest Log:     "exeErrorDiag": "",
2025-06-07 15:15:22 (31044): Guest Log:     "pilotErrorCode": 0,
2025-06-07 15:15:22 (31044): Guest Log:     "pilotErrorDiag": "",
2025-06-07 15:15:22 (31044): Guest Log:  *** Listing of results directory ***
2025-06-07 15:15:22 (31044): Guest Log: total 196260
2025-06-07 15:15:22 (31044): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 04:09 pilot3.tar.gz
2025-06-07 15:15:22 (31044): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 04:40 runpilot2-wrapper.sh
2025-06-07 15:15:22 (31044): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 04:40 queuedata.json
2025-06-07 15:15:22 (31044): Guest Log: -rwxr-xr-x. 1 atlas atlas     12044 Jun  7 16:59 init_data.xml
2025-06-07 15:15:22 (31044): Guest Log: -rwxr-xr-x. 1 atlas atlas    508873 Jun  7 16:59 input.tar.gz
2025-06-07 15:15:22 (31044): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  7 16:59 start_atlas.sh
2025-06-07 15:15:22 (31044): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  7 16:59 EVNT.44871834._002457.pool.root.1 -> /data/./ATLAS.root_0
2025-06-07 15:15:22 (31044): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  7 17:00 pandaJob.out
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas    985748 Jun  7 17:00 agis_schedconf.cvmfs.json
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  7 17:00 agis_ddmendpoints.agis.ALL.json
2025-06-07 15:15:22 (31044): Guest Log: drwx------. 4 atlas atlas      4096 Jun  7 17:01 pilot3
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas 195279418 Jun  7 19:14 HITS.44871837._062270.pool.root.1
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  7 19:14 memory_monitor_summary.json
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas    260445 Jun  7 19:14 log.44871837._062270.job.log.tgz.1
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas      7680 Jun  7 19:14 heartbeat.json
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas        95 Jun  7 19:14 pilot_heartbeat.json
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  7 19:15 pilotlog.txt
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas    705230 Jun  7 19:15 log.44871837._062270.job.log.1
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas       357 Jun  7 19:15 output.list
2025-06-07 15:15:22 (31044): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  7 19:15 runtime_log
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas    983040 Jun  7 19:15 result.tar.gz
2025-06-07 15:15:22 (31044): Guest Log: -rw-r--r--. 1 atlas atlas      8627 Jun  7 19:15 runtime_log.err
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas       665 Jun  7 19:15 bu6NDm6H1d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtKRKDm3LB7tm.diag
2025-06-07 15:15:22 (31044): Guest Log: Looking for outputfile HITS.44871837._062270.pool.root.1
2025-06-07 15:15:22 (31044): Guest Log: HITS file was successfully produced
2025-06-07 15:15:22 (31044): Guest Log: -rw-------. 1 atlas atlas 195279418 Jun  7 19:14 /home/atlas/RunAtlas/HITS.44871837._062270.pool.root.1
2025-06-07 15:15:23 (31044): Guest Log: Successfully finished the ATLAS job!
2025-06-07 15:15:23 (31044): Guest Log: Copying the results back to the shared directory!
2025-06-07 15:15:23 (31044): Guest Log:  *** Contents of shared directory: ***
2025-06-07 15:15:23 (31044): Guest Log: total 410900
2025-06-07 15:15:23 (31044): Guest Log: -rwxrwxrwx. 1 root root 223955005 Jun  7 16:59 ATLAS.root_0
2025-06-07 15:15:23 (31044): Guest Log: -rwxrwxrwx. 1 root root 195279418 Jun  7  2025 HITS.pool.root.1
2025-06-07 15:15:23 (31044): Guest Log: -rwxrwxrwx. 1 root root     12044 Jun  7 16:59 init_data.xml
2025-06-07 15:15:23 (31044): Guest Log: -rwxrwxrwx. 1 root root    508873 Jun  6 21:41 input.tar.gz
2025-06-07 15:15:23 (31044): Guest Log: -rwxrwxrwx. 1 root root    983040 Jun  7  2025 result.tar.gz
2025-06-07 15:15:23 (31044): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  6 21:41 start_atlas.sh
2025-06-07 15:15:23 (31044): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-07 15:15:23 (31044): VM Completion File Detected.
2025-06-07 15:15:23 (31044): Powering off VM.
2025-06-07 15:15:23 (31044): Successfully stopped VM.
2025-06-07 15:15:23 (31044): Deregistering VM. (boinc_6d22d1895652fd4c, slot#14)
2025-06-07 15:15:23 (31044): Removing network bandwidth throttle group from VM.
2025-06-07 15:15:23 (31044): Removing VM from VirtualBox.
15:15:28 (31044): called boinc_finish(0)

</stderr_txt>
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