Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:39:14 (27816): wrapper (7.7.26015): starting
15:39:14 (27816): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 15:39:14] Arguments: --nthreads 8
[2025-06-06 15:39:14] Threads: 8
[2025-06-06 15:39:14] Checking for CVMFS
[2025-06-06 15:39:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 15:39:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 15:39:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 15:39:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 15:39:14] 2.11.2.0 3101 19744 80744 146873 2 1 17322420 20275200 1 130560 0 8319110 99.982 3678180 5156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 15:39:14] CVMFS is ok
[2025-06-06 15:39:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:39:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:39:14] Further information can be found at the LHC@home message board.
[2025-06-06 15:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:39:14] Checking for apptainer binary...
[2025-06-06 15:39:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 15:39:14] Running /usr/bin/apptainer --version
[2025-06-06 15:39:14] apptainer version 1.3.2-1.el7
[2025-06-06 15:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:39:16] c-204-15.aglt2.org
[2025-06-06 15:39:16] apptainer works
[2025-06-06 15:39:16] Set ATHENA_PROC_NUMBER=8
[2025-06-06 15:39:16] Set ATHENA_CORE_NUMBER=8
[2025-06-06 15:39:16] Starting ATLAS job with PandaID=6672155526
[2025-06-06 15:39:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 18:18:35]  *** The last 200 lines of the pilot log: ***
[2025-06-06 18:18:35] 2025-06-06 22:18:22,019 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6672155526/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,020 | INFO     | extracted standard info from prmon json
[2025-06-06 18:18:35] 2025-06-06 22:18:22,020 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 18:18:35] 2025-06-06 22:18:22,020 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 18:18:35] 2025-06-06 22:18:22,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 18:18:35] 2025-06-06 22:18:22,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 18:18:35] 2025-06-06 22:18:22,025 | INFO     | fitting pss+swap vs Time
[2025-06-06 18:18:35] 2025-06-06 22:18:22,025 | INFO     | sum of square deviations: 1177156955.0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,026 | INFO     | sum of deviations: -14426864719.000017
[2025-06-06 18:18:35] 2025-06-06 22:18:22,026 | INFO     | mean x: 1749243536.5
[2025-06-06 18:18:35] 2025-06-06 22:18:22,026 | INFO     | mean y: 2513909.7564102565
[2025-06-06 18:18:35] 2025-06-06 22:18:22,026 | INFO     | -- intersect: 21440691507.467384
[2025-06-06 18:18:35] 2025-06-06 22:18:22,027 | INFO     | intersect: 21440691507.467384
[2025-06-06 18:18:35] 2025-06-06 22:18:22,027 | INFO     | chi2: 2.4539068434161093
[2025-06-06 18:18:35] 2025-06-06 22:18:22,027 | INFO     | sum of square deviations: 1067554900.0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,028 | INFO     | sum of deviations: -3411879693.9999943
[2025-06-06 18:18:35] 2025-06-06 22:18:22,028 | INFO     | mean x: 1749243384.0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,028 | INFO     | mean y: 2528863.238410596
[2025-06-06 18:18:35] 2025-06-06 22:18:22,028 | INFO     | -- intersect: 5593068498.936242
[2025-06-06 18:18:35] 2025-06-06 22:18:22,029 | INFO     | intersect: 5593068498.936242
[2025-06-06 18:18:35] 2025-06-06 22:18:22,029 | INFO     | chi2: 1.6849174008702237
[2025-06-06 18:18:35] 2025-06-06 22:18:22,029 | INFO     | current chi2=1.6849174008702237 (change=31.33735270387719 %)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,029 | INFO     | sum of square deviations: 964976232.5
[2025-06-06 18:18:35] 2025-06-06 22:18:22,030 | INFO     | sum of deviations: -2991516646.500004
[2025-06-06 18:18:35] 2025-06-06 22:18:22,030 | INFO     | mean x: 1749243231.5
[2025-06-06 18:18:35] 2025-06-06 22:18:22,030 | INFO     | mean y: 2529488.4589041094
[2025-06-06 18:18:35] 2025-06-06 22:18:22,030 | INFO     | -- intersect: 5425347242.480333
[2025-06-06 18:18:35] 2025-06-06 22:18:22,030 | INFO     | intersect: 5425347242.480333
[2025-06-06 18:18:35] 2025-06-06 22:18:22,031 | INFO     | chi2: 1.6852513128396456
[2025-06-06 18:18:35] 2025-06-06 22:18:22,031 | INFO     | current chi2=1.6852513128396456 (change=-0.01981770555930147 %)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,031 | INFO     | right removable region: 145
[2025-06-06 18:18:35] 2025-06-06 22:18:22,031 | INFO     | sum of square deviations: 1067554900.0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,032 | INFO     | sum of deviations: -38363464189.0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,032 | INFO     | mean x: 1749243689.0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,032 | INFO     | mean y: 2546724.4105960266
[2025-06-06 18:18:35] 2025-06-06 22:18:22,032 | INFO     | -- intersect: 62863058741.90568
[2025-06-06 18:18:35] 2025-06-06 22:18:22,033 | INFO     | intersect: 62863058741.90568
[2025-06-06 18:18:35] 2025-06-06 22:18:22,033 | INFO     | chi2: 0.9491103884619609
[2025-06-06 18:18:35] 2025-06-06 22:18:22,033 | INFO     | current chi2=0.9491103884619609 (change=61.322476808423 %)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,033 | INFO     | sum of square deviations: 964976232.5
[2025-06-06 18:18:35] 2025-06-06 22:18:22,034 | INFO     | sum of deviations: -35963775917.00001
[2025-06-06 18:18:35] 2025-06-06 22:18:22,034 | INFO     | mean x: 1749243841.5
[2025-06-06 18:18:35] 2025-06-06 22:18:22,034 | INFO     | mean y: 2543095.9178082193
[2025-06-06 18:18:35] 2025-06-06 22:18:22,034 | INFO     | -- intersect: 65195250875.79391
[2025-06-06 18:18:35] 2025-06-06 22:18:22,034 | INFO     | intersect: 65195250875.79391
[2025-06-06 18:18:35] 2025-06-06 22:18:22,035 | INFO     | chi2: 0.9392971660144978
[2025-06-06 18:18:35] 2025-06-06 22:18:22,035 | INFO     | current chi2=0.9392971660144978 (change=1.0339389987465604 %)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,035 | INFO     | left removable region: 20
[2025-06-06 18:18:35] 2025-06-06 22:18:22,035 | INFO     | sum of square deviations: 605592750.0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,036 | INFO     | sum of deviations: -15730370120.000002
[2025-06-06 18:18:35] 2025-06-06 22:18:22,036 | INFO     | mean x: 1749243811.0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,036 | INFO     | mean y: 2546826.04
[2025-06-06 18:18:35] 2025-06-06 22:18:22,036 | INFO     | -- intersect: 45439439155.33115
[2025-06-06 18:18:35] 2025-06-06 22:18:22,036 | INFO     | intersect: 45439439155.33115
[2025-06-06 18:18:35] 2025-06-06 22:18:22,037 | INFO     | chi2: 0.11891084548953189
[2025-06-06 18:18:35] 2025-06-06 22:18:22,037 | INFO     | -- intersect: 45439439155.33115
[2025-06-06 18:18:35] 2025-06-06 22:18:22,037 | INFO     | current memory leak: -25.98 B/s (using 125 data points, chi2=0.12)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,037 | INFO     | ..............................
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | . Timing measurements:
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | . get job = 0 s
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | . initial setup = 3 s
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | . payload setup = 12 s
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | . stage-in = 0 s
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | . payload execution = 9483 s
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | . stage-out = 0 s
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | . log creation = 0 s
[2025-06-06 18:18:35] 2025-06-06 22:18:22,038 | INFO     | ..............................
[2025-06-06 18:18:35] 2025-06-06 22:18:22,445 | INFO     | 
[2025-06-06 18:18:35] 2025-06-06 22:18:22,445 | INFO     | job summary report
[2025-06-06 18:18:35] 2025-06-06 22:18:22,446 | INFO     | --------------------------------------------------
[2025-06-06 18:18:35] 2025-06-06 22:18:22,446 | INFO     | PanDA job id: 6672155526
[2025-06-06 18:18:35] 2025-06-06 22:18:22,446 | INFO     | task id: 44871837
[2025-06-06 18:18:35] 2025-06-06 22:18:22,446 | INFO     | errors: (none)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,446 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 18:18:35] 2025-06-06 22:18:22,447 | INFO     | pilot state: finished 
[2025-06-06 18:18:35] 2025-06-06 22:18:22,447 | INFO     | transexitcode: 0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,447 | INFO     | exeerrorcode: 0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,447 | INFO     | exeerrordiag: 
[2025-06-06 18:18:35] 2025-06-06 22:18:22,447 | INFO     | exitcode: 0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,448 | INFO     | exitmsg: OK
[2025-06-06 18:18:35] 2025-06-06 22:18:22,448 | INFO     | cpuconsumptiontime: 71856 s
[2025-06-06 18:18:35] 2025-06-06 22:18:22,448 | INFO     | nevents: 400
[2025-06-06 18:18:35] 2025-06-06 22:18:22,448 | INFO     | neventsw: 0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,448 | INFO     | pid: 5819
[2025-06-06 18:18:35] 2025-06-06 22:18:22,448 | INFO     | pgrp: 5819
[2025-06-06 18:18:35] 2025-06-06 22:18:22,449 | INFO     | corecount: 8
[2025-06-06 18:18:35] 2025-06-06 22:18:22,449 | INFO     | event service: False
[2025-06-06 18:18:35] 2025-06-06 22:18:22,449 | INFO     | sizes: {0: 2397342, 1: 2397342, 7: 2397576, 11: 2397604, 9499: 2425808, 9500: 2434749, 9502: 2434933, 9510: 2435103}
[2025-06-06 18:18:35] 2025-06-06 22:18:22,449 | INFO     | --------------------------------------------------
[2025-06-06 18:18:35] 2025-06-06 22:18:22,449 | INFO     | 
[2025-06-06 18:18:35] 2025-06-06 22:18:22,450 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 18:18:35] 2025-06-06 22:18:22,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,481 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,481 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 18:18:35] 2025-06-06 22:18:22,481 | INFO     | job 6672155526 has completed (purged errors)
[2025-06-06 18:18:35] 2025-06-06 22:18:22,482 | INFO     | overall cleanup function is called
[2025-06-06 18:18:35] 2025-06-06 22:18:23,489 | INFO     | --- collectZombieJob: --- 10, [5819]
[2025-06-06 18:18:35] 2025-06-06 22:18:23,489 | INFO     | zombie collector waiting for pid 5819
[2025-06-06 18:18:35] 2025-06-06 22:18:23,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 18:18:35] 2025-06-06 22:18:23,490 | INFO     | collected zombie processes
[2025-06-06 18:18:35] 2025-06-06 22:18:23,490 | INFO     | will attempt to kill all subprocesses of pid=5819
[2025-06-06 18:18:35] 2025-06-06 22:18:23,581 | INFO     | process IDs to be killed: [5819] (in reverse order)
[2025-06-06 18:18:35] 2025-06-06 22:18:23,638 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 18:18:35] 2025-06-06 22:18:23,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 18:18:35] 2025-06-06 22:18:23,643 | INFO     | did not find any defunct processes belonging to 5819
[2025-06-06 18:18:35] 2025-06-06 22:18:23,646 | INFO     | did not find any defunct processes belonging to 5819
[2025-06-06 18:18:35] 2025-06-06 22:18:23,646 | INFO     | ready for new job
[2025-06-06 18:18:35] 2025-06-06 22:18:23,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 18:18:35] 2025-06-06 22:18:23,649 | INFO     | **************************************
[2025-06-06 18:18:35] 2025-06-06 22:18:23,649 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 18:18:35] 2025-06-06 22:18:23,649 | INFO     | **************************************
[2025-06-06 18:18:35] 2025-06-06 22:18:23,649 | INFO     | 
[2025-06-06 18:18:35] 2025-06-06 22:18:23,650 | INFO     | architecture information:
[2025-06-06 18:18:35] 2025-06-06 22:18:23,650 | INFO     | executing command: cat /etc/os-release
[2025-06-06 18:18:35] 2025-06-06 22:18:23,667 | INFO     | cat /etc/os-release:
[2025-06-06 18:18:35] NAME="CentOS Linux"
[2025-06-06 18:18:35] VERSION="7 (Core)"
[2025-06-06 18:18:35] ID="centos"
[2025-06-06 18:18:35] ID_LIKE="rhel fedora"
[2025-06-06 18:18:35] VERSION_ID="7"
[2025-06-06 18:18:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 18:18:35] ANSI_COLOR="0;31"
[2025-06-06 18:18:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 18:18:35] HOME_URL="https://www.centos.org/"
[2025-06-06 18:18:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 18:18:35] 
[2025-06-06 18:18:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 18:18:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 18:18:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 18:18:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 18:18:35] 
[2025-06-06 18:18:35] 2025-06-06 22:18:23,668 | INFO     | **************************************
[2025-06-06 18:18:35] 2025-06-06 22:18:24,170 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 18:18:35] 2025-06-06 22:18:24,190 | INFO     | sufficient remaining disk space (18608029696 B)
[2025-06-06 18:18:35] 2025-06-06 22:18:24,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 18:18:35] 2025-06-06 22:18:24,191 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 18:18:35] 2025-06-06 22:18:24,191 | INFO     | update_server=False
[2025-06-06 18:18:35] 2025-06-06 22:18:24,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 18:18:35] 2025-06-06 22:18:24,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:18:35] 2025-06-06 22:18:24,192 | INFO     | aborting loop
[2025-06-06 18:18:35] 2025-06-06 22:18:24,192 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 18:18:35] 2025-06-06 22:18:24,193 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 18:18:35] 2025-06-06 22:18:24,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 18:18:35] 2025-06-06 22:18:24,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 18:18:35] 2025-06-06 22:18:24,458 | INFO     | all data control threads have been joined
[2025-06-06 18:18:35] 2025-06-06 22:18:24,777 | INFO     | all payload control threads have been joined
[2025-06-06 18:18:35] 2025-06-06 22:18:24,780 | INFO     | all job control threads have been joined
[2025-06-06 18:18:35] 2025-06-06 22:18:24,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 18:18:35] 2025-06-06 22:18:24,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 18:18:35] 2025-06-06 22:18:25,197 | INFO     | [job] retrieve thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:25,198 | INFO     | [job] job monitor thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:25,464 | INFO     | [data] control thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:25,782 | INFO     | [payload] control thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:25,786 | INFO     | [job] control thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:25,821 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:25,971 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:26,209 | INFO     | [job] validate thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:26,217 | INFO     | [payload] failed_post thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:26,241 | INFO     | [payload] validate_post thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:26,396 | INFO     | [data] copytool_in thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:26,411 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:26,563 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:26,844 | INFO     | [data] copytool_out thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:27,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:18:35] 2025-06-06 22:18:28,138 | INFO     | [job] queue monitor thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:28,861 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 18:18:35] 2025-06-06 22:18:29,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983791839040)>', '<ExcThread(monitor, started 139982823999232)>']
[2025-06-06 18:18:35] 2025-06-06 22:18:30,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 18:18:35] 2025-06-06 22:18:30,211 | INFO     | [monitor] control thread has ended
[2025-06-06 18:18:35] 2025-06-06 22:18:34,697 | INFO     | all workflow threads have been joined
[2025-06-06 18:18:35] 2025-06-06 22:18:34,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 18:18:35] 2025-06-06 22:18:34,698 | INFO     | traces error code: 0
[2025-06-06 18:18:35] 2025-06-06 22:18:34,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 18:18:35] 2025-06-06 22:18:34,806 [wrapper] ==== pilot stdout END ====
[2025-06-06 18:18:35] 2025-06-06 22:18:34,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 18:18:35] 2025-06-06 22:18:34,815 [wrapper] pilotpid: 31481
[2025-06-06 18:18:35] 2025-06-06 22:18:34,820 [wrapper] Pilot exit status: 0
[2025-06-06 18:18:35] 2025-06-06 22:18:34,840 [wrapper] pandaids: 6672155526
[2025-06-06 18:18:35] 2025-06-06 22:18:34,881 [wrapper] cleanup supervisor_pilot 30124 31482
[2025-06-06 18:18:35] 2025-06-06 22:18:34,886 [wrapper] Test setup, not cleaning
[2025-06-06 18:18:35] 2025-06-06 22:18:34,890 [wrapper] apfmon messages muted
[2025-06-06 18:18:35] 2025-06-06 22:18:34,895 [wrapper] ==== wrapper stdout END ====
[2025-06-06 18:18:35] 2025-06-06 22:18:34,899 [wrapper] ==== wrapper stderr END ====
[2025-06-06 18:18:35]  *** Error codes and diagnostics ***
[2025-06-06 18:18:35]     "exeErrorCode": 0,
[2025-06-06 18:18:35]     "exeErrorDiag": "",
[2025-06-06 18:18:35]     "pilotErrorCode": 0,
[2025-06-06 18:18:35]     "pilotErrorDiag": "",
[2025-06-06 18:18:35]  *** Listing of results directory ***
[2025-06-06 18:18:35] total 416080
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas    495897 May 29 09:13 pilot3.tar.gz
[2025-06-06 18:18:35] -rwx------ 1 boincer umatlas     37140 May 29 09:19 runpilot2-wrapper.sh
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas      5111 May 29 09:19 queuedata.json
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas       100 Jun  6 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 18:18:35] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 15:39 run_atlas
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas       105 Jun  6 15:39 job.xml
[2025-06-06 18:18:35] -rw-r--r-- 2 boincer umatlas 226676962 Jun  6 15:39 EVNT.44871834._002957.pool.root.1
[2025-06-06 18:18:35] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 15:39 start_atlas.sh
[2025-06-06 18:18:35] drwxrwx--x 2 boincer umatlas      4096 Jun  6 15:39 shared
[2025-06-06 18:18:35] -rw-r--r-- 2 boincer umatlas    508883 Jun  6 15:39 input.tar.gz
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas         0 Jun  6 15:39 boinc_lockfile
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas      2559 Jun  6 15:39 pandaJob.out
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas    985748 Jun  6 15:39 agis_schedconf.cvmfs.json
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas   1598969 Jun  6 15:39 agis_ddmendpoints.agis.ALL.json
[2025-06-06 18:18:35] drwx------ 4 boincer umatlas      4096 Jun  6 15:39 pilot3
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas      5825 Jun  6 18:12 init_data.xml
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas 193114603 Jun  6 18:17 HITS.44871837._100823.pool.root.1
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas        95 Jun  6 18:17 pilot_heartbeat.json
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas      1049 Jun  6 18:18 memory_monitor_summary.json
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas       530 Jun  6 18:18 boinc_task_state.xml
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas    362017 Jun  6 18:18 log.44871837._100823.job.log.tgz.1
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas      7752 Jun  6 18:18 heartbeat.json
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 18:18 boinc_mmap_file
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas        27 Jun  6 18:18 wrapper_checkpoint.txt
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas      4476 Jun  6 18:18 pilotlog.txt
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas    856738 Jun  6 18:18 log.44871837._100823.job.log.1
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas       357 Jun  6 18:18 output.list
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas       620 Jun  6 18:18 runtime_log
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas   1239040 Jun  6 18:18 result.tar.gz
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas       661 Jun  6 18:18 vZWNDmNLse7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQIVKDm6uYOWo.diag
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas      8659 Jun  6 18:18 runtime_log.err
[2025-06-06 18:18:35] -rw-r--r-- 1 boincer umatlas     20816 Jun  6 18:18 stderr.txt
[2025-06-06 18:18:35] HITS file was successfully produced:
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas 193114603 Jun  6 18:17 shared/HITS.pool.root.1
[2025-06-06 18:18:35]  *** Contents of shared directory: ***
[2025-06-06 18:18:35] total 411692
[2025-06-06 18:18:35] -rw-r--r-- 2 boincer umatlas 226676962 Jun  6 15:39 ATLAS.root_0
[2025-06-06 18:18:35] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 15:39 start_atlas.sh
[2025-06-06 18:18:35] -rw-r--r-- 2 boincer umatlas    508883 Jun  6 15:39 input.tar.gz
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas 193114603 Jun  6 18:17 HITS.pool.root.1
[2025-06-06 18:18:35] -rw------- 1 boincer umatlas   1239040 Jun  6 18:18 result.tar.gz
18:18:36 (27816): run_atlas exited; CPU time 71789.674245
18:18:36 (27816): called boinc_finish(0)

</stderr_txt>
]]>

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