Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:31:29 (5351): wrapper (7.7.26015): starting
15:31:29 (5351): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 15:31:29] Arguments: --nthreads 12
[2025-06-06 15:31:29] Threads: 12
[2025-06-06 15:31:29] Checking for CVMFS
[2025-06-06 15:31:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 15:31:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 15:31:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 15:31:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 15:31:30] 2.11.2.0 2949 38985 84652 146873 2 1 14743746 20275201 1 130560 0 16287613 99.986 6104190 7469 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 15:31:30] CVMFS is ok
[2025-06-06 15:31:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:31:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:31:30] Further information can be found at the LHC@home message board.
[2025-06-06 15:31:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:31:30] Checking for apptainer binary...
[2025-06-06 15:31:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 15:31:30] Running /usr/bin/apptainer --version
[2025-06-06 15:31:30] apptainer version 1.3.2-1.el7
[2025-06-06 15:31:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:31:31] c-205-13.aglt2.org
[2025-06-06 15:31:31] apptainer works
[2025-06-06 15:31:31] Set ATHENA_PROC_NUMBER=12
[2025-06-06 15:31:31] Set ATHENA_CORE_NUMBER=12
[2025-06-06 15:31:31] Starting ATLAS job with PandaID=6671785390
[2025-06-06 15:31:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 17:09:15]  *** The last 200 lines of the pilot log: ***
[2025-06-06 17:09:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 17:09:15]  is_altstaged=None
[2025-06-06 17:09:15]  is_tar=False
[2025-06-06 17:09:15]  lfn=log.44871837._100585.job.log.tgz.1
[2025-06-06 17:09:15]  mtime=0
[2025-06-06 17:09:15]  protocol_id=None
[2025-06-06 17:09:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 17:09:15]  replicas=None
[2025-06-06 17:09:15]  scope=mc23_13p6TeV
[2025-06-06 17:09:15]  status=None
[2025-06-06 17:09:15]  status_code=0
[2025-06-06 17:09:15]  storage_token=
[2025-06-06 17:09:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6671785390/log.44871837._100585.job.log.tgz.1
[2025-06-06 17:09:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/83/log.44871837._100585.job.log.tgz.1
[2025-06-06 17:09:15]  workdir=None
[2025-06-06 17:09:15] ]
[2025-06-06 17:09:15] 2025-06-06 21:08:49,186 | INFO     | transferring file log.44871837._100585.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6671785390/log.44871837._100585.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 17:09:15] 2025-06-06 21:08:49,186 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6671785390/log.44871837._100585.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._100585.job
[2025-06-06 17:09:15] 2025-06-06 21:08:49,209 | INFO     | adding to output.list: log.44871837._100585.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/83/log.44871837._100585.job.log.tg
[2025-06-06 17:09:15] 2025-06-06 21:08:49,210 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 17:09:15] 2025-06-06 21:08:49,210 | INFO     | summary of transferred files:
[2025-06-06 17:09:15] 2025-06-06 21:08:49,210 | INFO     |  -- lfn=log.44871837._100585.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 17:09:15] 2025-06-06 21:08:49,211 | INFO     | stage-out finished correctly
[2025-06-06 17:09:15] 2025-06-06 21:08:50,741 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 17:09:15] 2025-06-06 21:08:52,264 | INFO     | job 6671785390 has state=finished
[2025-06-06 17:09:15] 2025-06-06 21:08:52,264 | INFO     | preparing for final server update for job 6671785390 in state='finished'
[2025-06-06 17:09:15] 2025-06-06 21:08:52,264 | INFO     | this job has now completed (state=finished)
[2025-06-06 17:09:15] 2025-06-06 21:08:52,265 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 17:09:15] 2025-06-06 21:08:52,265 | INFO     | log transfer has been attempted: DONE
[2025-06-06 17:09:15] 2025-06-06 21:08:52,265 | INFO     | job 6671785390 has finished - writing final server update
[2025-06-06 17:09:15] 2025-06-06 21:08:52,265 | INFO     | total number of processed events: 400 (read)
[2025-06-06 17:09:15] 2025-06-06 21:08:52,267 | INFO     | executing command: lscpu
[2025-06-06 17:09:15] 2025-06-06 21:08:52,295 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 17:09:15] 2025-06-06 21:08:52,765 | WARNING  | process 15772 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 17:09:15] 2025-06-06 21:08:52,765 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6671785390/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 17:09:15] 2025-06-06 21:08:52,855 | INFO     | number of running child processes to parent process 15772: 1
[2025-06-06 17:09:15] 2025-06-06 21:08:52,855 | INFO     | maximum number of monitored processes: 6
[2025-06-06 17:09:15] 2025-06-06 21:08:55,358 | INFO     | monitor loop #435: job 0:6671785390 is in state 'finished'
[2025-06-06 17:09:15] 2025-06-06 21:08:55,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 17:09:15] 2025-06-06 21:08:56,875 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 17:09:15] 2025-06-06 21:08:56,875 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6671785390/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 17:09:15] 2025-06-06 21:08:56,876 | INFO     | extracted standard info from prmon json
[2025-06-06 17:09:15] 2025-06-06 21:08:56,876 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 17:09:15] 2025-06-06 21:08:56,876 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 17:09:15] 2025-06-06 21:08:56,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 17:09:15] 2025-06-06 21:08:56,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 17:09:15] 2025-06-06 21:08:56,880 | INFO     | fitting pss+swap vs Time
[2025-06-06 17:09:15] 2025-06-06 21:08:56,880 | INFO     | sum of square deviations: 211285822.0
[2025-06-06 17:09:15] 2025-06-06 21:08:56,880 | INFO     | sum of deviations: -13729171393.5
[2025-06-06 17:09:15] 2025-06-06 21:08:56,881 | INFO     | mean x: 1749241295.5
[2025-06-06 17:09:15] 2025-06-06 21:08:56,881 | INFO     | mean y: 2810238.7613636362
[2025-06-06 17:09:15] 2025-06-06 21:08:56,881 | INFO     | -- intersect: 113667008466.4469
[2025-06-06 17:09:15] 2025-06-06 21:08:56,881 | INFO     | intersect: 113667008466.4469
[2025-06-06 17:09:15] 2025-06-06 21:08:56,881 | INFO     | chi2: 0.11037507670067333
[2025-06-06 17:09:15] 2025-06-06 21:08:56,881 | INFO     | -- intersect: 113667008466.4469
[2025-06-06 17:09:15] 2025-06-06 21:08:56,882 | INFO     | current memory leak: -64.98 B/s (using 88 data points, chi2=0.11)
[2025-06-06 17:09:15] 2025-06-06 21:08:56,882 | INFO     | ..............................
[2025-06-06 17:09:15] 2025-06-06 21:08:56,882 | INFO     | . Timing measurements:
[2025-06-06 17:09:15] 2025-06-06 21:08:56,882 | INFO     | . get job = 0 s
[2025-06-06 17:09:15] 2025-06-06 21:08:56,882 | INFO     | . initial setup = 2 s
[2025-06-06 17:09:15] 2025-06-06 21:08:56,882 | INFO     | . payload setup = 9 s
[2025-06-06 17:09:15] 2025-06-06 21:08:56,883 | INFO     | . stage-in = 0 s
[2025-06-06 17:09:15] 2025-06-06 21:08:56,883 | INFO     | . payload execution = 5792 s
[2025-06-06 17:09:15] 2025-06-06 21:08:56,883 | INFO     | . stage-out = 0 s
[2025-06-06 17:09:15] 2025-06-06 21:08:56,883 | INFO     | . log creation = 0 s
[2025-06-06 17:09:15] 2025-06-06 21:08:56,883 | INFO     | ..............................
[2025-06-06 17:09:15] 2025-06-06 21:08:57,134 | INFO     | 
[2025-06-06 17:09:15] 2025-06-06 21:08:57,135 | INFO     | job summary report
[2025-06-06 17:09:15] 2025-06-06 21:08:57,135 | INFO     | --------------------------------------------------
[2025-06-06 17:09:15] 2025-06-06 21:08:57,135 | INFO     | PanDA job id: 6671785390
[2025-06-06 17:09:15] 2025-06-06 21:08:57,135 | INFO     | task id: 44871837
[2025-06-06 17:09:15] 2025-06-06 21:08:57,135 | INFO     | errors: (none)
[2025-06-06 17:09:15] 2025-06-06 21:08:57,136 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 17:09:15] 2025-06-06 21:08:57,136 | INFO     | pilot state: finished 
[2025-06-06 17:09:15] 2025-06-06 21:08:57,136 | INFO     | transexitcode: 0
[2025-06-06 17:09:15] 2025-06-06 21:08:57,136 | INFO     | exeerrorcode: 0
[2025-06-06 17:09:15] 2025-06-06 21:08:57,136 | INFO     | exeerrordiag: 
[2025-06-06 17:09:15] 2025-06-06 21:08:57,136 | INFO     | exitcode: 0
[2025-06-06 17:09:15] 2025-06-06 21:08:57,136 | INFO     | exitmsg: OK
[2025-06-06 17:09:15] 2025-06-06 21:08:57,137 | INFO     | cpuconsumptiontime: 62558 s
[2025-06-06 17:09:15] 2025-06-06 21:08:57,137 | INFO     | nevents: 400
[2025-06-06 17:09:15] 2025-06-06 21:08:57,137 | INFO     | neventsw: 0
[2025-06-06 17:09:15] 2025-06-06 21:08:57,137 | INFO     | pid: 15772
[2025-06-06 17:09:15] 2025-06-06 21:08:57,137 | INFO     | pgrp: 15772
[2025-06-06 17:09:15] 2025-06-06 21:08:57,137 | INFO     | corecount: 12
[2025-06-06 17:09:15] 2025-06-06 21:08:57,138 | INFO     | event service: False
[2025-06-06 17:09:15] 2025-06-06 21:08:57,138 | INFO     | sizes: {0: 2396514, 1: 2397370, 6: 2397576, 12: 2397604, 5806: 2424133, 5807: 2433257, 5809: 2433257, 5815: 2433427}
[2025-06-06 17:09:15] 2025-06-06 21:08:57,138 | INFO     | --------------------------------------------------
[2025-06-06 17:09:15] 2025-06-06 21:08:57,138 | INFO     | 
[2025-06-06 17:09:15] 2025-06-06 21:08:57,138 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 17:09:15] 2025-06-06 21:08:57,161 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 17:09:15] 2025-06-06 21:08:57,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,165 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 17:09:15] 2025-06-06 21:08:57,165 | INFO     | job 6671785390 has completed (purged errors)
[2025-06-06 17:09:15] 2025-06-06 21:08:57,166 | INFO     | overall cleanup function is called
[2025-06-06 17:09:15] 2025-06-06 21:08:58,174 | INFO     | --- collectZombieJob: --- 10, [15772]
[2025-06-06 17:09:15] 2025-06-06 21:08:58,174 | INFO     | zombie collector waiting for pid 15772
[2025-06-06 17:09:15] 2025-06-06 21:08:58,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 17:09:15] 2025-06-06 21:08:58,175 | INFO     | collected zombie processes
[2025-06-06 17:09:15] 2025-06-06 21:08:58,175 | INFO     | will attempt to kill all subprocesses of pid=15772
[2025-06-06 17:09:15] 2025-06-06 21:08:58,264 | INFO     | process IDs to be killed: [15772] (in reverse order)
[2025-06-06 17:09:15] 2025-06-06 21:08:58,315 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 17:09:15] 2025-06-06 21:08:58,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 17:09:15] 2025-06-06 21:08:58,319 | INFO     | did not find any defunct processes belonging to 15772
[2025-06-06 17:09:15] 2025-06-06 21:08:58,322 | INFO     | did not find any defunct processes belonging to 15772
[2025-06-06 17:09:15] 2025-06-06 21:08:58,322 | INFO     | ready for new job
[2025-06-06 17:09:15] 2025-06-06 21:08:58,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 17:09:15] 2025-06-06 21:08:58,323 | INFO     | **************************************
[2025-06-06 17:09:15] 2025-06-06 21:08:58,323 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 17:09:15] 2025-06-06 21:08:58,323 | INFO     | **************************************
[2025-06-06 17:09:15] 2025-06-06 21:08:58,323 | INFO     | 
[2025-06-06 17:09:15] 2025-06-06 21:08:58,324 | INFO     | architecture information:
[2025-06-06 17:09:15] 2025-06-06 21:08:58,324 | INFO     | executing command: cat /etc/os-release
[2025-06-06 17:09:15] 2025-06-06 21:08:58,338 | INFO     | cat /etc/os-release:
[2025-06-06 17:09:15] NAME="CentOS Linux"
[2025-06-06 17:09:15] VERSION="7 (Core)"
[2025-06-06 17:09:15] ID="centos"
[2025-06-06 17:09:15] ID_LIKE="rhel fedora"
[2025-06-06 17:09:15] VERSION_ID="7"
[2025-06-06 17:09:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 17:09:15] ANSI_COLOR="0;31"
[2025-06-06 17:09:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 17:09:15] HOME_URL="https://www.centos.org/"
[2025-06-06 17:09:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 17:09:15] 
[2025-06-06 17:09:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 17:09:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 17:09:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 17:09:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 17:09:15] 
[2025-06-06 17:09:15] 2025-06-06 21:08:58,338 | INFO     | **************************************
[2025-06-06 17:09:15] 2025-06-06 21:08:58,841 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 17:09:15] 2025-06-06 21:08:58,857 | INFO     | sufficient remaining disk space (29380050944 B)
[2025-06-06 17:09:15] 2025-06-06 21:08:58,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 17:09:15] 2025-06-06 21:08:58,857 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 17:09:15] 2025-06-06 21:08:58,857 | INFO     | update_server=False
[2025-06-06 17:09:15] 2025-06-06 21:08:58,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 17:09:15] 2025-06-06 21:08:58,858 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 17:09:15] 2025-06-06 21:08:58,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:09:15] 2025-06-06 21:08:58,858 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 17:09:15] 2025-06-06 21:08:58,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 17:09:15] 2025-06-06 21:08:58,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 17:09:15] 2025-06-06 21:08:58,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:09:15] 2025-06-06 21:08:58,866 | INFO     | aborting loop
[2025-06-06 17:09:15] 2025-06-06 21:08:58,973 | INFO     | all job control threads have been joined
[2025-06-06 17:09:15] 2025-06-06 21:08:59,272 | INFO     | all data control threads have been joined
[2025-06-06 17:09:15] 2025-06-06 21:08:59,282 | INFO     | all payload control threads have been joined
[2025-06-06 17:09:15] 2025-06-06 21:08:59,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 17:09:15] 2025-06-06 21:08:59,863 | INFO     | [job] retrieve thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:08:59,864 | INFO     | [job] queue monitor thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:08:59,872 | INFO     | [job] job monitor thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:08:59,873 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:08:59,979 | INFO     | [job] control thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:00,277 | INFO     | [data] control thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:00,288 | INFO     | [payload] control thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:00,368 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:00,661 | INFO     | [payload] validate_post thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:00,688 | INFO     | [data] copytool_in thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:00,800 | INFO     | [payload] failed_post thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:01,273 | INFO     | [job] validate thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:01,284 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:01,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 17:09:15] 2025-06-06 21:09:01,821 | INFO     | [data] copytool_out thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:05,337 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:08,959 | INFO     | job.realtimelogging is not enabled
[2025-06-06 17:09:15] 2025-06-06 21:09:09,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 17:09:15] 2025-06-06 21:09:10,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041988110144)>', '<ExcThread(monitor, started 140041032562432)>']
[2025-06-06 17:09:15] 2025-06-06 21:09:10,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 17:09:15] 2025-06-06 21:09:10,920 | INFO     | [monitor] control thread has ended
[2025-06-06 17:09:15] 2025-06-06 21:09:15,149 | INFO     | all workflow threads have been joined
[2025-06-06 17:09:15] 2025-06-06 21:09:15,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 17:09:15] 2025-06-06 21:09:15,149 | INFO     | traces error code: 0
[2025-06-06 17:09:15] 2025-06-06 21:09:15,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 17:09:15] 2025-06-06 21:09:15,234 [wrapper] ==== pilot stdout END ====
[2025-06-06 17:09:15] 2025-06-06 21:09:15,238 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 17:09:15] 2025-06-06 21:09:15,242 [wrapper] pilotpid: 9310
[2025-06-06 17:09:15] 2025-06-06 21:09:15,246 [wrapper] Pilot exit status: 0
[2025-06-06 17:09:15] 2025-06-06 21:09:15,261 [wrapper] pandaids: 6671785390
[2025-06-06 17:09:15] 2025-06-06 21:09:15,301 [wrapper] cleanup supervisor_pilot  3461 9311
[2025-06-06 17:09:15] 2025-06-06 21:09:15,304 [wrapper] Test setup, not cleaning
[2025-06-06 17:09:15] 2025-06-06 21:09:15,308 [wrapper] apfmon messages muted
[2025-06-06 17:09:15] 2025-06-06 21:09:15,311 [wrapper] ==== wrapper stdout END ====
[2025-06-06 17:09:15] 2025-06-06 21:09:15,315 [wrapper] ==== wrapper stderr END ====
[2025-06-06 17:09:15]  *** Error codes and diagnostics ***
[2025-06-06 17:09:15]     "exeErrorCode": 0,
[2025-06-06 17:09:15]     "exeErrorDiag": "",
[2025-06-06 17:09:15]     "pilotErrorCode": 0,
[2025-06-06 17:09:15]     "pilotErrorDiag": "",
[2025-06-06 17:09:15]  *** Listing of results directory ***
[2025-06-06 17:09:15] total 421568
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas    495897 May 29 08:27 pilot3.tar.gz
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas      5111 May 29 09:09 queuedata.json
[2025-06-06 17:09:15] -rwx------ 1 boincer umatlas     37140 May 29 09:09 runpilot2-wrapper.sh
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas       100 Jun  6 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 17:09:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 15:31 run_atlas
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas       105 Jun  6 15:31 job.xml
[2025-06-06 17:09:15] -rw-r--r-- 2 boincer umatlas 223821621 Jun  6 15:31 EVNT.44871834._002972.pool.root.1
[2025-06-06 17:09:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 15:31 start_atlas.sh
[2025-06-06 17:09:15] drwxrwx--x 2 boincer umatlas      4096 Jun  6 15:31 shared
[2025-06-06 17:09:15] -rw-r--r-- 2 boincer umatlas    508881 Jun  6 15:31 input.tar.gz
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas         0 Jun  6 15:31 boinc_lockfile
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas      2559 Jun  6 15:31 pandaJob.out
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas    985748 Jun  6 15:31 agis_schedconf.cvmfs.json
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas   1598969 Jun  6 15:31 agis_ddmendpoints.agis.ALL.json
[2025-06-06 17:09:15] drwx------ 4 boincer umatlas      4096 Jun  6 15:31 pilot3
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas      5867 Jun  6 17:02 init_data.xml
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas        95 Jun  6 17:08 pilot_heartbeat.json
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas 202173471 Jun  6 17:08 HITS.44871837._100585.pool.root.1
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas       529 Jun  6 17:08 boinc_task_state.xml
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas      1044 Jun  6 17:08 memory_monitor_summary.json
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas    388110 Jun  6 17:08 log.44871837._100585.job.log.tgz.1
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas      7748 Jun  6 17:08 heartbeat.json
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 17:09 boinc_mmap_file
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas      4548 Jun  6 17:09 pilotlog.txt
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas        27 Jun  6 17:09 wrapper_checkpoint.txt
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas    544272 Jun  6 17:09 log.44871837._100585.job.log.1
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas       357 Jun  6 17:09 output.list
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas       620 Jun  6 17:09 runtime_log
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas    952320 Jun  6 17:09 result.tar.gz
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas      8661 Jun  6 17:09 runtime_log.err
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas       659 Jun  6 17:09 L1fMDmSBse7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtceKDmuqHaQn.diag
[2025-06-06 17:09:15] -rw-r--r-- 1 boincer umatlas     21338 Jun  6 17:09 stderr.txt
[2025-06-06 17:09:15] HITS file was successfully produced:
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas 202173471 Jun  6 17:08 shared/HITS.pool.root.1
[2025-06-06 17:09:15]  *** Contents of shared directory: ***
[2025-06-06 17:09:15] total 417464
[2025-06-06 17:09:15] -rw-r--r-- 2 boincer umatlas 223821621 Jun  6 15:31 ATLAS.root_0
[2025-06-06 17:09:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 15:31 start_atlas.sh
[2025-06-06 17:09:15] -rw-r--r-- 2 boincer umatlas    508881 Jun  6 15:31 input.tar.gz
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas 202173471 Jun  6 17:08 HITS.pool.root.1
[2025-06-06 17:09:15] -rw------- 1 boincer umatlas    952320 Jun  6 17:09 result.tar.gz
17:09:17 (5351): run_atlas exited; CPU time 62537.804341
17:09:17 (5351): called boinc_finish(0)

</stderr_txt>
]]>

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