Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:19:26 (1158408): wrapper (7.7.26015): starting
15:19:26 (1158408): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 15:19:26] Arguments: --nthreads 12
[2025-06-06 15:19:26] Threads: 12
[2025-06-06 15:19:26] Checking for CVMFS
[2025-06-06 15:19:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 15:19:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 15:19:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 15:19:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 15:19:27] 2.12.6.0 5653 4112 159248 146873 0 237 19989583 32935936 7723 16776704 0 9387507 99.695 7097510 34853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 15:19:27] CVMFS is ok
[2025-06-06 15:19:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:19:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:19:27] Further information can be found at the LHC@home message board.
[2025-06-06 15:19:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:19:27] Checking for apptainer binary...
[2025-06-06 15:19:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 15:19:27] Running /usr/bin/apptainer --version
[2025-06-06 15:19:27] apptainer version 1.4.1-1.el9
[2025-06-06 15:19:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:19:27] c6-1-24-2.aglt2.org
[2025-06-06 15:19:27] apptainer works
[2025-06-06 15:19:27] Set ATHENA_PROC_NUMBER=12
[2025-06-06 15:19:27] Set ATHENA_CORE_NUMBER=12
[2025-06-06 15:19:27] Starting ATLAS job with PandaID=6678074927
[2025-06-06 15:19:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 16:13:39]  *** The last 200 lines of the pilot log: ***
[2025-06-06 16:13:39]  lfn=log.45006595._046214.job.log.tgz.1
[2025-06-06 16:13:39]  mtime=0
[2025-06-06 16:13:39]  protocol_id=None
[2025-06-06 16:13:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 16:13:39]  replicas=None
[2025-06-06 16:13:39]  scope=mc23_13p6TeV
[2025-06-06 16:13:39]  status=None
[2025-06-06 16:13:39]  status_code=0
[2025-06-06 16:13:39]  storage_token=
[2025-06-06 16:13:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678074927/log.45006595._046214.job.log.tgz.1
[2025-06-06 16:13:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/6e/log.45006595._046214.job.log.tgz.1
[2025-06-06 16:13:39]  workdir=None
[2025-06-06 16:13:39] ]
[2025-06-06 16:13:39] 2025-06-06 20:13:01,052 | INFO     | transferring file log.45006595._046214.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678074927/log.45006595._046214.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 16:13:39] 2025-06-06 20:13:01,054 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678074927/log.45006595._046214.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046214.job
[2025-06-06 16:13:39] 2025-06-06 20:13:01,075 | INFO     | adding to output.list: log.45006595._046214.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/6e/log.45006595._046214.job.log.tg
[2025-06-06 16:13:39] 2025-06-06 20:13:01,076 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 16:13:39] 2025-06-06 20:13:01,077 | INFO     | summary of transferred files:
[2025-06-06 16:13:39] 2025-06-06 20:13:01,077 | INFO     |  -- lfn=log.45006595._046214.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 16:13:39] 2025-06-06 20:13:01,077 | INFO     | stage-out finished correctly
[2025-06-06 16:13:39] 2025-06-06 20:13:03,596 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 16:13:39] 2025-06-06 20:13:03,688 | INFO     | job 6678074927 has state=finished
[2025-06-06 16:13:39] 2025-06-06 20:13:03,689 | INFO     | preparing for final server update for job 6678074927 in state='finished'
[2025-06-06 16:13:39] 2025-06-06 20:13:03,690 | INFO     | this job has now completed (state=finished)
[2025-06-06 16:13:39] 2025-06-06 20:13:03,690 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 16:13:39] 2025-06-06 20:13:03,690 | INFO     | log transfer has been attempted: DONE
[2025-06-06 16:13:39] 2025-06-06 20:13:03,690 | INFO     | job 6678074927 has finished - writing final server update
[2025-06-06 16:13:39] 2025-06-06 20:13:03,691 | INFO     | total number of processed events: 400 (read)
[2025-06-06 16:13:39] 2025-06-06 20:13:03,692 | INFO     | executing command: lscpu
[2025-06-06 16:13:39] 2025-06-06 20:13:03,750 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 16:13:39] 2025-06-06 20:13:03,820 | WARNING  | process 1169089 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 16:13:39] 2025-06-06 20:13:03,821 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678074927/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:13:39] 2025-06-06 20:13:04,061 | INFO     | number of running child processes to parent process 1169089: 1
[2025-06-06 16:13:39] 2025-06-06 20:13:04,062 | INFO     | maximum number of monitored processes: 6
[2025-06-06 16:13:39] 2025-06-06 20:13:06,566 | INFO     | monitor loop #239: job 0:6678074927 is in state 'finished'
[2025-06-06 16:13:39] 2025-06-06 20:13:06,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 16:13:39] 2025-06-06 20:13:07,747 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 16:13:39] 2025-06-06 20:13:07,751 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2884.2084464285713
[2025-06-06 16:13:39] 2025-06-06 20:13:07,760 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678074927/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:13:39] 2025-06-06 20:13:07,761 | INFO     | extracted standard info from prmon json
[2025-06-06 16:13:39] 2025-06-06 20:13:07,761 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 16:13:39] 2025-06-06 20:13:07,761 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 16:13:39] 2025-06-06 20:13:07,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 16:13:39] 2025-06-06 20:13:07,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 16:13:39] 2025-06-06 20:13:07,763 | INFO     | fitting pss+swap vs Time
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | sum of square deviations: 30171425.41304345
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | sum of deviations: 183723141.36956513
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | mean x: 1749239279.5434783
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | mean y: 2798459.065217391
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | -- intersect: -10648860554.228477
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | intersect: -10648860554.228477
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | chi2: 0.014762669583672772
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | -- intersect: -10648860554.228477
[2025-06-06 16:13:39] 2025-06-06 20:13:07,764 | INFO     | current memory leak: 6.09 B/s (using 46 data points, chi2=0.01)
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | could have reported an average CPU frequency of 2881 MHz (5 samples)
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | ..............................
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | . Timing measurements:
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | . get job = 0 s
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | . initial setup = 2 s
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | . payload setup = 6 s
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | . stage-in = 0 s
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | . payload execution = 3178 s
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | . stage-out = 0 s
[2025-06-06 16:13:39] 2025-06-06 20:13:07,765 | INFO     | . log creation = 0 s
[2025-06-06 16:13:39] 2025-06-06 20:13:07,766 | INFO     | ..............................
[2025-06-06 16:13:39] 2025-06-06 20:13:07,863 | INFO     | 
[2025-06-06 16:13:39] 2025-06-06 20:13:07,863 | INFO     | job summary report
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | --------------------------------------------------
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | PanDA job id: 6678074927
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | task id: 45006595
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | errors: (none)
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | pilot state: finished 
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | transexitcode: 0
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | exeerrorcode: 0
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | exeerrordiag: 
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | exitcode: 0
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | exitmsg: OK
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | cpuconsumptiontime: 29697 s
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | nevents: 400
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | neventsw: 0
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | pid: 1169089
[2025-06-06 16:13:39] 2025-06-06 20:13:07,864 | INFO     | pgrp: 1169089
[2025-06-06 16:13:39] 2025-06-06 20:13:07,865 | INFO     | corecount: 12
[2025-06-06 16:13:39] 2025-06-06 20:13:07,865 | INFO     | event service: False
[2025-06-06 16:13:39] 2025-06-06 20:13:07,865 | INFO     | sizes: {0: 2397512, 1: 2397711, 5: 2397973, 11: 2398029, 3188: 2423517, 3189: 2432458, 3192: 2432642, 3196: 2432868}
[2025-06-06 16:13:39] 2025-06-06 20:13:07,865 | INFO     | --------------------------------------------------
[2025-06-06 16:13:39] 2025-06-06 20:13:07,865 | INFO     | 
[2025-06-06 16:13:39] 2025-06-06 20:13:07,865 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 16:13:39] 2025-06-06 20:13:07,884 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,884 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,884 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,884 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,886 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 16:13:39] 2025-06-06 20:13:07,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,886 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 16:13:39] 2025-06-06 20:13:07,886 | INFO     | job 6678074927 has completed (purged errors)
[2025-06-06 16:13:39] 2025-06-06 20:13:07,886 | INFO     | overall cleanup function is called
[2025-06-06 16:13:39] 2025-06-06 20:13:08,894 | INFO     | --- collectZombieJob: --- 10, [1169089]
[2025-06-06 16:13:39] 2025-06-06 20:13:08,895 | INFO     | zombie collector waiting for pid 1169089
[2025-06-06 16:13:39] 2025-06-06 20:13:08,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 16:13:39] 2025-06-06 20:13:08,895 | INFO     | collected zombie processes
[2025-06-06 16:13:39] 2025-06-06 20:13:08,895 | INFO     | will attempt to kill all subprocesses of pid=1169089
[2025-06-06 16:13:39] 2025-06-06 20:13:09,114 | INFO     | process IDs to be killed: [1169089] (in reverse order)
[2025-06-06 16:13:39] 2025-06-06 20:13:09,185 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 16:13:39] 2025-06-06 20:13:09,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 16:13:39] 2025-06-06 20:13:09,197 | INFO     | did not find any defunct processes belonging to 1169089
[2025-06-06 16:13:39] 2025-06-06 20:13:09,206 | INFO     | did not find any defunct processes belonging to 1169089
[2025-06-06 16:13:39] 2025-06-06 20:13:09,206 | INFO     | ready for new job
[2025-06-06 16:13:39] 2025-06-06 20:13:09,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 16:13:39] 2025-06-06 20:13:09,209 | INFO     | ***************************************
[2025-06-06 16:13:39] 2025-06-06 20:13:09,209 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 16:13:39] 2025-06-06 20:13:09,209 | INFO     | ***************************************
[2025-06-06 16:13:39] 2025-06-06 20:13:09,209 | INFO     | 
[2025-06-06 16:13:39] 2025-06-06 20:13:09,223 | INFO     | architecture information:
[2025-06-06 16:13:39] 2025-06-06 20:13:09,224 | INFO     | executing command: cat /etc/os-release
[2025-06-06 16:13:39] 2025-06-06 20:13:09,239 | INFO     | cat /etc/os-release:
[2025-06-06 16:13:39] NAME="CentOS Linux"
[2025-06-06 16:13:39] VERSION="7 (Core)"
[2025-06-06 16:13:39] ID="centos"
[2025-06-06 16:13:39] ID_LIKE="rhel fedora"
[2025-06-06 16:13:39] VERSION_ID="7"
[2025-06-06 16:13:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 16:13:39] ANSI_COLOR="0;31"
[2025-06-06 16:13:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 16:13:39] HOME_URL="https://www.centos.org/"
[2025-06-06 16:13:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 16:13:39] 
[2025-06-06 16:13:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 16:13:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 16:13:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 16:13:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 16:13:39] 
[2025-06-06 16:13:39] 2025-06-06 20:13:09,239 | INFO     | ***************************************
[2025-06-06 16:13:39] 2025-06-06 20:13:09,743 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 16:13:39] 2025-06-06 20:13:09,759 | INFO     | sufficient remaining disk space (76288098304 B)
[2025-06-06 16:13:39] 2025-06-06 20:13:09,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 16:13:39] 2025-06-06 20:13:09,760 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 16:13:39] 2025-06-06 20:13:09,760 | INFO     | update_server=False
[2025-06-06 16:13:39] 2025-06-06 20:13:09,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 16:13:39] 2025-06-06 20:13:09,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:13:39] 2025-06-06 20:13:09,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 16:13:39] 2025-06-06 20:13:09,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 16:13:39] 2025-06-06 20:13:09,773 | INFO     | all data control threads have been joined
[2025-06-06 16:13:39] 2025-06-06 20:13:10,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:13:39] 2025-06-06 20:13:10,077 | INFO     | aborting loop
[2025-06-06 16:13:39] 2025-06-06 20:13:10,765 | INFO     | [job] retrieve thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:10,766 | INFO     | [job] queue monitor thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:10,770 | INFO     | all job control threads have been joined
[2025-06-06 16:13:39] 2025-06-06 20:13:10,778 | INFO     | [data] control thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:10,828 | INFO     | [payload] validate_post thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:10,848 | INFO     | [job] validate thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:10,871 | INFO     | all payload control threads have been joined
[2025-06-06 16:13:39] 2025-06-06 20:13:11,082 | INFO     | [job] job monitor thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:11,443 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:11,469 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:11,581 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:11,584 | INFO     | [payload] failed_post thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:11,766 | INFO     | [data] copytool_out thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:11,775 | INFO     | [job] control thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:11,876 | INFO     | [payload] control thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:11,965 | INFO     | [data] copytool_in thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:13,767 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:20,239 | INFO     | job.realtimelogging is not enabled
[2025-06-06 16:13:39] 2025-06-06 20:13:21,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 16:13:39] 2025-06-06 20:13:21,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816467244864)>', '<ExcThread(monitor, started 139816100402944)>']
[2025-06-06 16:13:39] 2025-06-06 20:13:26,800 | INFO     | all workflow threads have been joined
[2025-06-06 16:13:39] 2025-06-06 20:13:26,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 16:13:39] 2025-06-06 20:13:26,801 | INFO     | traces error code: 0
[2025-06-06 16:13:39] 2025-06-06 20:13:26,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 16:13:39] 2025-06-06 20:13:39,684 | INFO     | PID=1162370 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 16:13:39] 2025-06-06 20:13:39,685 | INFO     | .. there are 8 such processes running
[2025-06-06 16:13:39] 2025-06-06 20:13:39,686 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 16:13:39] 2025-06-06 20:13:39,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 16:13:39] 2025-06-06 20:13:39,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 16:13:39] 2025-06-06 20:13:39,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 16:13:39] 2025-06-06 20:13:39,686 | INFO     | [monitor] control thread has ended
[2025-06-06 16:13:39] 2025-06-06 20:13:39,857 [wrapper] ==== pilot stdout END ====
[2025-06-06 16:13:39] 2025-06-06 20:13:39,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 16:13:39] 2025-06-06 20:13:39,863 [wrapper] pilotpid: 1162370
[2025-06-06 16:13:39] 2025-06-06 20:13:39,866 [wrapper] Pilot exit status: 0
[2025-06-06 16:13:39] 2025-06-06 20:13:39,876 [wrapper] pandaids: 6678074927
[2025-06-06 16:13:39] 2025-06-06 20:13:39,927 [wrapper] cleanup supervisor_pilot 1283531 1162371
[2025-06-06 16:13:39] 2025-06-06 20:13:39,930 [wrapper] Test setup, not cleaning
[2025-06-06 16:13:39] 2025-06-06 20:13:39,934 [wrapper] apfmon messages muted
[2025-06-06 16:13:39] 2025-06-06 20:13:39,937 [wrapper] ==== wrapper stdout END ====
[2025-06-06 16:13:39] 2025-06-06 20:13:39,940 [wrapper] ==== wrapper stderr END ====
[2025-06-06 16:13:39]  *** Error codes and diagnostics ***
[2025-06-06 16:13:40]     "exeErrorCode": 0,
[2025-06-06 16:13:40]     "exeErrorDiag": "",
[2025-06-06 16:13:40]     "pilotErrorCode": 0,
[2025-06-06 16:13:40]     "pilotErrorDiag": "",
[2025-06-06 16:13:40]  *** Listing of results directory ***
[2025-06-06 16:13:40] total 390940
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas    549845 Jun  2 05:40 pilot3.tar.gz
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 17:46 queuedata.json
[2025-06-06 16:13:40] -rwx------. 1 boincer umatlas     37140 Jun  3 17:46 runpilot2-wrapper.sh
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas       100 Jun  6 15:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 16:13:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 15:19 run_atlas
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas       105 Jun  6 15:19 job.xml
[2025-06-06 16:13:40] -rw-r--r--. 2 boincer umatlas 214603888 Jun  6 15:19 EVNT.45006593._001854.pool.root.1
[2025-06-06 16:13:40] -rw-r--r--. 2 boincer umatlas    564112 Jun  6 15:19 input.tar.gz
[2025-06-06 16:13:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 15:19 start_atlas.sh
[2025-06-06 16:13:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 15:19 shared
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas         0 Jun  6 15:19 boinc_lockfile
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas      2525 Jun  6 15:19 pandaJob.out
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas    985748 Jun  6 15:19 agis_schedconf.cvmfs.json
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas   1598969 Jun  6 15:19 agis_ddmendpoints.agis.ALL.json
[2025-06-06 16:13:40] drwx------. 6 boincer umatlas      4096 Jun  6 15:19 pilot3
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas      6839 Jun  6 16:11 init_data.xml
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas 180431107 Jun  6 16:12 HITS.45006595._046214.pool.root.1
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas       529 Jun  6 16:12 boinc_task_state.xml
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas      1043 Jun  6 16:12 memory_monitor_summary.json
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas    341953 Jun  6 16:13 log.45006595._046214.job.log.tgz.1
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas      7753 Jun  6 16:13 heartbeat.json
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas        27 Jun  6 16:13 wrapper_checkpoint.txt
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 16:13 boinc_mmap_file
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas        95 Jun  6 16:13 pilot_heartbeat.json
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas       822 Jun  6 16:13 pilotlog.txt
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas    337846 Jun  6 16:13 log.45006595._046214.job.log.1
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas       357 Jun  6 16:13 output.list
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas       620 Jun  6 16:13 runtime_log
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas    696320 Jun  6 16:13 result.tar.gz
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas      8666 Jun  6 16:13 runtime_log.err
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas       653 Jun  6 16:13 fX7NDm8dog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmX1ZKDm4mTxLm.diag
[2025-06-06 16:13:40] -rw-r--r--. 1 boincer umatlas     21693 Jun  6 16:13 stderr.txt
[2025-06-06 16:13:40] HITS file was successfully produced:
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas 180431107 Jun  6 16:12 shared/HITS.pool.root.1
[2025-06-06 16:13:40]  *** Contents of shared directory: ***
[2025-06-06 16:13:40] total 387032
[2025-06-06 16:13:40] -rw-r--r--. 2 boincer umatlas 214603888 Jun  6 15:19 ATLAS.root_0
[2025-06-06 16:13:40] -rw-r--r--. 2 boincer umatlas    564112 Jun  6 15:19 input.tar.gz
[2025-06-06 16:13:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 15:19 start_atlas.sh
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas 180431107 Jun  6 16:12 HITS.pool.root.1
[2025-06-06 16:13:40] -rw-------. 1 boincer umatlas    696320 Jun  6 16:13 result.tar.gz
16:13:41 (1158408): run_atlas exited; CPU time 29715.534543
16:13:41 (1158408): called boinc_finish(0)

</stderr_txt>
]]>

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