Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:18:45 (542048): wrapper (7.7.26015): starting
15:18:45 (542048): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 15:18:45] Arguments: --nthreads 10
[2025-06-06 15:18:45] Threads: 10
[2025-06-06 15:18:45] Checking for CVMFS
[2025-06-06 15:18:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 15:18:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 15:18:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 15:18:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 15:18:45] 2.12.6.0 5977 4595 257616 146873 0 71 19062945 32935937 21268 16776704 0 31927373 99.609 29894850 24653 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 15:18:45] CVMFS is ok
[2025-06-06 15:18:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:18:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:18:45] Further information can be found at the LHC@home message board.
[2025-06-06 15:18:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:18:45] Checking for apptainer binary...
[2025-06-06 15:18:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 15:18:45] Running /usr/bin/apptainer --version
[2025-06-06 15:18:45] apptainer version 1.4.1-1.el9
[2025-06-06 15:18:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:18:46] c-1-3.aglt2.org
[2025-06-06 15:18:46] apptainer works
[2025-06-06 15:18:46] Set ATHENA_PROC_NUMBER=10
[2025-06-06 15:18:46] Set ATHENA_CORE_NUMBER=10
[2025-06-06 15:18:46] Starting ATLAS job with PandaID=6671181196
[2025-06-06 15:18:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 17:06:29]  *** The last 200 lines of the pilot log: ***
[2025-06-06 17:06:29] 2025-06-06 21:06:14,215 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 17:06:29] 2025-06-06 21:06:14,215 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6671181196/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,216 | INFO     | extracted standard info from prmon json
[2025-06-06 17:06:29] 2025-06-06 21:06:14,217 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 17:06:29] 2025-06-06 21:06:14,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 17:06:29] 2025-06-06 21:06:14,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 17:06:29] 2025-06-06 21:06:14,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 17:06:29] 2025-06-06 21:06:14,220 | INFO     | fitting pss+swap vs Time
[2025-06-06 17:06:29] 2025-06-06 21:06:14,221 | INFO     | sum of square deviations: 358927660.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,221 | INFO     | sum of deviations: -9874630956.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,221 | INFO     | mean x: 1749240741.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,221 | INFO     | mean y: 2425453.180952381
[2025-06-06 17:06:29] 2025-06-06 21:06:14,221 | INFO     | -- intersect: 48126626219.91757
[2025-06-06 17:06:29] 2025-06-06 21:06:14,221 | INFO     | intersect: 48126626219.91757
[2025-06-06 17:06:29] 2025-06-06 21:06:14,222 | INFO     | chi2: 2.082295539380428
[2025-06-06 17:06:29] 2025-06-06 21:06:14,222 | INFO     | sum of square deviations: 310052325.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,222 | INFO     | sum of deviations: -6139885368.5
[2025-06-06 17:06:29] 2025-06-06 21:06:14,223 | INFO     | mean x: 1749240588.5
[2025-06-06 17:06:29] 2025-06-06 21:06:14,223 | INFO     | mean y: 2436982.59
[2025-06-06 17:06:29] 2025-06-06 21:06:14,223 | INFO     | -- intersect: 34642192370.063644
[2025-06-06 17:06:29] 2025-06-06 21:06:14,223 | INFO     | intersect: 34642192370.063644
[2025-06-06 17:06:29] 2025-06-06 21:06:14,223 | INFO     | chi2: 2.067016567863078
[2025-06-06 17:06:29] 2025-06-06 21:06:14,223 | INFO     | current chi2=2.067016567863078 (change=0.7337561469250505 %)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,223 | INFO     | right removable region: 99
[2025-06-06 17:06:29] 2025-06-06 21:06:14,223 | INFO     | sum of square deviations: 310052325.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,224 | INFO     | sum of deviations: -27547712179.000004
[2025-06-06 17:06:29] 2025-06-06 21:06:14,224 | INFO     | mean x: 1749240893.5
[2025-06-06 17:06:29] 2025-06-06 21:06:14,224 | INFO     | mean y: 2479711.86
[2025-06-06 17:06:29] 2025-06-06 21:06:14,224 | INFO     | -- intersect: 155420068229.78128
[2025-06-06 17:06:29] 2025-06-06 21:06:14,224 | INFO     | intersect: 155420068229.78128
[2025-06-06 17:06:29] 2025-06-06 21:06:14,224 | INFO     | chi2: 0.2842304536376302
[2025-06-06 17:06:29] 2025-06-06 21:06:14,225 | INFO     | current chi2=0.2842304536376302 (change=86.3501386684908 %)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,225 | INFO     | sum of square deviations: 265828240.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,225 | INFO     | sum of deviations: -28021803020.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,225 | INFO     | mean x: 1749241046.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,225 | INFO     | mean y: 2481050.905263158
[2025-06-06 17:06:29] 2025-06-06 21:06:14,226 | INFO     | -- intersect: 184395561430.5924
[2025-06-06 17:06:29] 2025-06-06 21:06:14,226 | INFO     | intersect: 184395561430.5924
[2025-06-06 17:06:29] 2025-06-06 21:06:14,226 | INFO     | chi2: 0.18024494231148225
[2025-06-06 17:06:29] 2025-06-06 21:06:14,226 | INFO     | current chi2=0.18024494231148225 (change=36.584929586299964 %)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,226 | INFO     | sum of square deviations: 226022842.5
[2025-06-06 17:06:29] 2025-06-06 21:06:14,226 | INFO     | sum of deviations: -25496723178.500004
[2025-06-06 17:06:29] 2025-06-06 21:06:14,227 | INFO     | mean x: 1749241198.5
[2025-06-06 17:06:29] 2025-06-06 21:06:14,227 | INFO     | mean y: 2471341.033333333
[2025-06-06 17:06:29] 2025-06-06 21:06:14,227 | INFO     | -- intersect: 197327299740.10132
[2025-06-06 17:06:29] 2025-06-06 21:06:14,227 | INFO     | intersect: 197327299740.10132
[2025-06-06 17:06:29] 2025-06-06 21:06:14,227 | INFO     | chi2: 0.1678145835373508
[2025-06-06 17:06:29] 2025-06-06 21:06:14,227 | INFO     | current chi2=0.1678145835373508 (change=6.896370358426195 %)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,227 | INFO     | left removable region: 30
[2025-06-06 17:06:29] 2025-06-06 21:06:14,227 | INFO     | sum of square deviations: 101843770.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,228 | INFO     | sum of deviations: -13848942423.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,228 | INFO     | mean x: 1749241473.0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,228 | INFO     | mean y: 2447977.652173913
[2025-06-06 17:06:29] 2025-06-06 21:06:14,228 | INFO     | -- intersect: 237868195126.4538
[2025-06-06 17:06:29] 2025-06-06 21:06:14,228 | INFO     | intersect: 237868195126.4538
[2025-06-06 17:06:29] 2025-06-06 21:06:14,228 | INFO     | chi2: 0.13858743663390394
[2025-06-06 17:06:29] 2025-06-06 21:06:14,228 | INFO     | -- intersect: 237868195126.4538
[2025-06-06 17:06:29] 2025-06-06 21:06:14,228 | INFO     | current memory leak: -135.98 B/s (using 69 data points, chi2=0.14)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,229 | INFO     | ..............................
[2025-06-06 17:06:29] 2025-06-06 21:06:14,229 | INFO     | . Timing measurements:
[2025-06-06 17:06:29] 2025-06-06 21:06:14,229 | INFO     | . get job = 0 s
[2025-06-06 17:06:29] 2025-06-06 21:06:14,229 | INFO     | . initial setup = 3 s
[2025-06-06 17:06:29] 2025-06-06 21:06:14,229 | INFO     | . payload setup = 8 s
[2025-06-06 17:06:29] 2025-06-06 21:06:14,230 | INFO     | . stage-in = 0 s
[2025-06-06 17:06:29] 2025-06-06 21:06:14,230 | INFO     | . payload execution = 6399 s
[2025-06-06 17:06:29] 2025-06-06 21:06:14,230 | INFO     | . stage-out = 0 s
[2025-06-06 17:06:29] 2025-06-06 21:06:14,230 | INFO     | . log creation = 0 s
[2025-06-06 17:06:29] 2025-06-06 21:06:14,230 | INFO     | ..............................
[2025-06-06 17:06:29] 2025-06-06 21:06:14,333 | INFO     | 
[2025-06-06 17:06:29] 2025-06-06 21:06:14,333 | INFO     | job summary report
[2025-06-06 17:06:29] 2025-06-06 21:06:14,333 | INFO     | --------------------------------------------------
[2025-06-06 17:06:29] 2025-06-06 21:06:14,333 | INFO     | PanDA job id: 6671181196
[2025-06-06 17:06:29] 2025-06-06 21:06:14,333 | INFO     | task id: 44871837
[2025-06-06 17:06:29] 2025-06-06 21:06:14,333 | INFO     | errors: (none)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | pilot state: finished 
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | transexitcode: 0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | exeerrorcode: 0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | exeerrordiag: 
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | exitcode: 0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | exitmsg: OK
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | cpuconsumptiontime: 55886 s
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | nevents: 400
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | neventsw: 0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | pid: 553500
[2025-06-06 17:06:29] 2025-06-06 21:06:14,334 | INFO     | pgrp: 553500
[2025-06-06 17:06:29] 2025-06-06 21:06:14,335 | INFO     | corecount: 10
[2025-06-06 17:06:29] 2025-06-06 21:06:14,335 | INFO     | event service: False
[2025-06-06 17:06:29] 2025-06-06 21:06:14,335 | INFO     | sizes: {0: 2397342, 5: 2397548, 11: 2397604, 6410: 2424503, 6412: 2433444, 6414: 2433500, 6419: 2433798}
[2025-06-06 17:06:29] 2025-06-06 21:06:14,335 | INFO     | --------------------------------------------------
[2025-06-06 17:06:29] 2025-06-06 21:06:14,335 | INFO     | 
[2025-06-06 17:06:29] 2025-06-06 21:06:14,335 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 17:06:29] 2025-06-06 21:06:14,364 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,364 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,365 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,366 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,366 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,366 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,366 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 17:06:29] 2025-06-06 21:06:14,366 | INFO     | job 6671181196 has completed (purged errors)
[2025-06-06 17:06:29] 2025-06-06 21:06:14,366 | INFO     | overall cleanup function is called
[2025-06-06 17:06:29] 2025-06-06 21:06:15,375 | INFO     | --- collectZombieJob: --- 10, [553500]
[2025-06-06 17:06:29] 2025-06-06 21:06:15,375 | INFO     | zombie collector waiting for pid 553500
[2025-06-06 17:06:29] 2025-06-06 21:06:15,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 17:06:29] 2025-06-06 21:06:15,375 | INFO     | collected zombie processes
[2025-06-06 17:06:29] 2025-06-06 21:06:15,376 | INFO     | will attempt to kill all subprocesses of pid=553500
[2025-06-06 17:06:29] 2025-06-06 21:06:15,813 | INFO     | process IDs to be killed: [553500] (in reverse order)
[2025-06-06 17:06:29] 2025-06-06 21:06:15,962 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 17:06:29] 2025-06-06 21:06:15,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 17:06:29] 2025-06-06 21:06:15,981 | INFO     | did not find any defunct processes belonging to 553500
[2025-06-06 17:06:29] 2025-06-06 21:06:15,999 | INFO     | did not find any defunct processes belonging to 553500
[2025-06-06 17:06:29] 2025-06-06 21:06:15,999 | INFO     | ready for new job
[2025-06-06 17:06:29] 2025-06-06 21:06:15,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 17:06:29] 2025-06-06 21:06:16,002 | INFO     | **************************************
[2025-06-06 17:06:29] 2025-06-06 21:06:16,002 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 17:06:29] 2025-06-06 21:06:16,003 | INFO     | **************************************
[2025-06-06 17:06:29] 2025-06-06 21:06:16,003 | INFO     | 
[2025-06-06 17:06:29] 2025-06-06 21:06:16,022 | INFO     | architecture information:
[2025-06-06 17:06:29] 2025-06-06 21:06:16,024 | INFO     | executing command: cat /etc/os-release
[2025-06-06 17:06:29] 2025-06-06 21:06:16,044 | INFO     | cat /etc/os-release:
[2025-06-06 17:06:29] NAME="CentOS Linux"
[2025-06-06 17:06:29] VERSION="7 (Core)"
[2025-06-06 17:06:29] ID="centos"
[2025-06-06 17:06:29] ID_LIKE="rhel fedora"
[2025-06-06 17:06:29] VERSION_ID="7"
[2025-06-06 17:06:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 17:06:29] ANSI_COLOR="0;31"
[2025-06-06 17:06:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 17:06:29] HOME_URL="https://www.centos.org/"
[2025-06-06 17:06:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 17:06:29] 
[2025-06-06 17:06:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 17:06:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 17:06:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 17:06:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 17:06:29] 
[2025-06-06 17:06:29] 2025-06-06 21:06:16,044 | INFO     | **************************************
[2025-06-06 17:06:29] 2025-06-06 21:06:16,548 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 17:06:29] 2025-06-06 21:06:16,574 | INFO     | sufficient remaining disk space (76457967616 B)
[2025-06-06 17:06:29] 2025-06-06 21:06:16,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 17:06:29] 2025-06-06 21:06:16,575 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 17:06:29] 2025-06-06 21:06:16,575 | INFO     | update_server=False
[2025-06-06 17:06:29] 2025-06-06 21:06:16,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 17:06:29] 2025-06-06 21:06:16,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 17:06:29] 2025-06-06 21:06:16,777 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 17:06:29] 2025-06-06 21:06:16,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 17:06:29] 2025-06-06 21:06:16,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 17:06:29] 2025-06-06 21:06:17,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:06:29] 2025-06-06 21:06:17,215 | INFO     | aborting loop
[2025-06-06 17:06:29] 2025-06-06 21:06:17,580 | INFO     | [job] retrieve thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:17,642 | INFO     | all data control threads have been joined
[2025-06-06 17:06:29] 2025-06-06 21:06:17,822 | INFO     | all job control threads have been joined
[2025-06-06 17:06:29] 2025-06-06 21:06:17,893 | INFO     | [job] validate thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:17,939 | INFO     | [payload] failed_post thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:17,947 | INFO     | all payload control threads have been joined
[2025-06-06 17:06:29] 2025-06-06 21:06:18,115 | INFO     | [payload] validate_post thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,220 | INFO     | [job] job monitor thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,347 | INFO     | [data] copytool_in thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,581 | INFO     | [data] copytool_out thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,648 | INFO     | [data] control thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,825 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,827 | INFO     | [job] control thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,855 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,907 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:18,952 | INFO     | [payload] control thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:19,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:06:29] 2025-06-06 21:06:19,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 17:06:29] 2025-06-06 21:06:20,349 | INFO     | [job] queue monitor thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:23,721 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 17:06:29] 2025-06-06 21:06:24,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139879135040)>', '<ExcThread(monitor, started 140138936002304)>']
[2025-06-06 17:06:29] 2025-06-06 21:06:24,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 17:06:29] 2025-06-06 21:06:24,819 | INFO     | [monitor] control thread has ended
[2025-06-06 17:06:29] 2025-06-06 21:06:29,165 | INFO     | all workflow threads have been joined
[2025-06-06 17:06:29] 2025-06-06 21:06:29,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 17:06:29] 2025-06-06 21:06:29,166 | INFO     | traces error code: 0
[2025-06-06 17:06:29] 2025-06-06 21:06:29,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 17:06:29] 2025-06-06 21:06:29,331 [wrapper] ==== pilot stdout END ====
[2025-06-06 17:06:29] 2025-06-06 21:06:29,335 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 17:06:29] 2025-06-06 21:06:29,338 [wrapper] pilotpid: 546526
[2025-06-06 17:06:29] 2025-06-06 21:06:29,341 [wrapper] Pilot exit status: 0
[2025-06-06 17:06:29] 2025-06-06 21:06:29,353 [wrapper] pandaids: 6671181196
[2025-06-06 17:06:29] 2025-06-06 21:06:29,422 [wrapper] cleanup supervisor_pilot 1075842 546527
[2025-06-06 17:06:29] 2025-06-06 21:06:29,424 [wrapper] Test setup, not cleaning
[2025-06-06 17:06:29] 2025-06-06 21:06:29,428 [wrapper] apfmon messages muted
[2025-06-06 17:06:29] 2025-06-06 21:06:29,430 [wrapper] ==== wrapper stdout END ====
[2025-06-06 17:06:29] 2025-06-06 21:06:29,433 [wrapper] ==== wrapper stderr END ====
[2025-06-06 17:06:29]  *** Error codes and diagnostics ***
[2025-06-06 17:06:29]     "exeErrorCode": 0,
[2025-06-06 17:06:29]     "exeErrorDiag": "",
[2025-06-06 17:06:29]     "pilotErrorCode": 0,
[2025-06-06 17:06:29]     "pilotErrorDiag": "",
[2025-06-06 17:06:29]  *** Listing of results directory ***
[2025-06-06 17:06:29] total 415940
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas    495897 May 29 08:12 pilot3.tar.gz
[2025-06-06 17:06:29] -rwx------. 1 boincer umatlas     37140 May 29 08:23 runpilot2-wrapper.sh
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas      5111 May 29 08:23 queuedata.json
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas       100 Jun  6 15:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 17:06:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 15:18 run_atlas
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas       105 Jun  6 15:18 job.xml
[2025-06-06 17:06:29] -rw-r--r--. 2 boincer umatlas 223252254 Jun  6 15:18 EVNT.44871834._002215.pool.root.1
[2025-06-06 17:06:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 15:18 start_atlas.sh
[2025-06-06 17:06:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 15:18 shared
[2025-06-06 17:06:29] -rw-r--r--. 2 boincer umatlas    508885 Jun  6 15:18 input.tar.gz
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas         0 Jun  6 15:18 boinc_lockfile
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 15:18 pandaJob.out
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas    985748 Jun  6 15:18 agis_schedconf.cvmfs.json
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas   1598969 Jun  6 15:18 agis_ddmendpoints.agis.ALL.json
[2025-06-06 17:06:29] drwx------. 4 boincer umatlas      4096 Jun  6 15:18 pilot3
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas      6837 Jun  6 17:01 init_data.xml
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas 196939475 Jun  6 17:05 HITS.44871837._100084.pool.root.1
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas        95 Jun  6 17:05 pilot_heartbeat.json
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas       529 Jun  6 17:05 boinc_task_state.xml
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas      1040 Jun  6 17:06 memory_monitor_summary.json
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas    346157 Jun  6 17:06 log.44871837._100084.job.log.tgz.1
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 17:06 boinc_mmap_file
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas        27 Jun  6 17:06 wrapper_checkpoint.txt
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas      7719 Jun  6 17:06 heartbeat.json
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas      4353 Jun  6 17:06 pilotlog.txt
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas    602554 Jun  6 17:06 log.44871837._100084.job.log.1
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas       357 Jun  6 17:06 output.list
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas       620 Jun  6 17:06 runtime_log
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas    972800 Jun  6 17:06 result.tar.gz
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas      8646 Jun  6 17:06 runtime_log.err
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas       650 Jun  6 17:06 5bXMDm7Sre7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxXeKDmzd6eHm.diag
[2025-06-06 17:06:29] -rw-r--r--. 1 boincer umatlas     20760 Jun  6 17:06 stderr.txt
[2025-06-06 17:06:29] HITS file was successfully produced:
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas 196939475 Jun  6 17:05 shared/HITS.pool.root.1
[2025-06-06 17:06:29]  *** Contents of shared directory: ***
[2025-06-06 17:06:29] total 411816
[2025-06-06 17:06:29] -rw-r--r--. 2 boincer umatlas 223252254 Jun  6 15:18 ATLAS.root_0
[2025-06-06 17:06:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 15:18 start_atlas.sh
[2025-06-06 17:06:29] -rw-r--r--. 2 boincer umatlas    508885 Jun  6 15:18 input.tar.gz
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas 196939475 Jun  6 17:05 HITS.pool.root.1
[2025-06-06 17:06:29] -rw-------. 1 boincer umatlas    972800 Jun  6 17:06 result.tar.gz
17:06:30 (542048): run_atlas exited; CPU time 56115.380902
17:06:30 (542048): called boinc_finish(0)

</stderr_txt>
]]>

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