Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:16:03 (77746): wrapper (7.7.26015): starting
15:16:03 (77746): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 15:16:03] Arguments: --nthreads 8
[2025-06-06 15:16:03] Threads: 8
[2025-06-06 15:16:03] Checking for CVMFS
[2025-06-06 15:16:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 15:16:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 15:16:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 15:16:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 15:16:04] 2.11.2.0 73730 14273 329196 146873 3 14 15666718 18432000 17523 130560 0 105522172 99.464 119631222 72664 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 15:16:04] CVMFS is ok
[2025-06-06 15:16:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:16:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:16:04] Further information can be found at the LHC@home message board.
[2025-06-06 15:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:16:04] Checking for apptainer binary...
[2025-06-06 15:16:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 15:16:04] Running /usr/bin/apptainer --version
[2025-06-06 15:16:04] apptainer version 1.3.2-1.el7
[2025-06-06 15:16:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:16:08] c-212-10.aglt2.org
[2025-06-06 15:16:08] apptainer works
[2025-06-06 15:16:08] Set ATHENA_PROC_NUMBER=8
[2025-06-06 15:16:08] Set ATHENA_CORE_NUMBER=8
[2025-06-06 15:16:08] Starting ATLAS job with PandaID=6671652342
[2025-06-06 15:16:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 17:29:05]  *** The last 200 lines of the pilot log: ***
[2025-06-06 17:29:05] 2025-06-06 21:28:45,069 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 17:29:05] 2025-06-06 21:28:45,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 17:29:05] 2025-06-06 21:28:45,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 17:29:05] 2025-06-06 21:28:45,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 17:29:05] 2025-06-06 21:28:45,072 | INFO     | fitting pss+swap vs Time
[2025-06-06 17:29:05] 2025-06-06 21:28:45,072 | INFO     | sum of square deviations: 681212772.5
[2025-06-06 17:29:05] 2025-06-06 21:28:45,073 | INFO     | sum of deviations: -18939148453.5
[2025-06-06 17:29:05] 2025-06-06 21:28:45,073 | INFO     | mean x: 1749241365.5
[2025-06-06 17:29:05] 2025-06-06 21:28:45,073 | INFO     | mean y: 2571157.0076923077
[2025-06-06 17:29:05] 2025-06-06 21:28:45,073 | INFO     | -- intersect: 48635161794.76992
[2025-06-06 17:29:05] 2025-06-06 21:28:45,073 | INFO     | intersect: 48635161794.76992
[2025-06-06 17:29:05] 2025-06-06 21:28:45,073 | INFO     | chi2: 2.4455083246300626
[2025-06-06 17:29:05] 2025-06-06 21:28:45,073 | INFO     | sum of square deviations: 605592750.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,074 | INFO     | sum of deviations: -8773649214.999994
[2025-06-06 17:29:05] 2025-06-06 21:28:45,074 | INFO     | mean x: 1749241213.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,074 | INFO     | mean y: 2591121.136
[2025-06-06 17:29:05] 2025-06-06 21:28:45,074 | INFO     | -- intersect: 25345082086.034588
[2025-06-06 17:29:05] 2025-06-06 21:28:45,074 | INFO     | intersect: 25345082086.034588
[2025-06-06 17:29:05] 2025-06-06 21:28:45,074 | INFO     | chi2: 1.6888329017465402
[2025-06-06 17:29:05] 2025-06-06 21:28:45,074 | INFO     | current chi2=1.6888329017465402 (change=30.941437216247724 %)
[2025-06-06 17:29:05] 2025-06-06 21:28:45,075 | INFO     | sum of square deviations: 535786790.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,075 | INFO     | sum of deviations: -7336472074.000002
[2025-06-06 17:29:05] 2025-06-06 21:28:45,075 | INFO     | mean x: 1749241060.5
[2025-06-06 17:29:05] 2025-06-06 21:28:45,075 | INFO     | mean y: 2594262.4833333334
[2025-06-06 17:29:05] 2025-06-06 21:28:45,075 | INFO     | -- intersect: 23954767833.3405
[2025-06-06 17:29:05] 2025-06-06 21:28:45,076 | INFO     | intersect: 23954767833.3405
[2025-06-06 17:29:05] 2025-06-06 21:28:45,076 | INFO     | chi2: 1.6905761624543056
[2025-06-06 17:29:05] 2025-06-06 21:28:45,076 | INFO     | current chi2=1.6905761624543056 (change=-0.10322280587751448 %)
[2025-06-06 17:29:05] 2025-06-06 21:28:45,076 | INFO     | right removable region: 119
[2025-06-06 17:29:05] 2025-06-06 21:28:45,076 | INFO     | sum of square deviations: 605592750.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,077 | INFO     | sum of deviations: -39255614809.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,077 | INFO     | mean x: 1749241518.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,077 | INFO     | mean y: 2611403.648
[2025-06-06 17:29:05] 2025-06-06 21:28:45,077 | INFO     | -- intersect: 113391602996.626
[2025-06-06 17:29:05] 2025-06-06 21:28:45,077 | INFO     | intersect: 113391602996.626
[2025-06-06 17:29:05] 2025-06-06 21:28:45,077 | INFO     | chi2: 0.9013701537044476
[2025-06-06 17:29:05] 2025-06-06 21:28:45,077 | INFO     | current chi2=0.9013701537044476 (change=63.141807998515 %)
[2025-06-06 17:29:05] 2025-06-06 21:28:45,077 | INFO     | sum of square deviations: 535786790.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | sum of deviations: -37193999242.5
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | mean x: 1749241670.5
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | mean y: 2606872.425
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | -- intersect: 121433919816.00548
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | intersect: 121433919816.00548
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | chi2: 0.8953372637241445
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | current chi2=0.8953372637241445 (change=0.6693021679838421 %)
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | left removable region: 20
[2025-06-06 17:29:05] 2025-06-06 21:28:45,078 | INFO     | sum of square deviations: 300842850.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,079 | INFO     | sum of deviations: -19932345726.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,079 | INFO     | mean x: 1749241640.0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,079 | INFO     | mean y: 2621799.8181818184
[2025-06-06 17:29:05] 2025-06-06 21:28:45,079 | INFO     | -- intersect: 115898642352.72556
[2025-06-06 17:29:05] 2025-06-06 21:28:45,079 | INFO     | intersect: 115898642352.72556
[2025-06-06 17:29:05] 2025-06-06 21:28:45,079 | INFO     | chi2: 0.08765662325815683
[2025-06-06 17:29:05] 2025-06-06 21:28:45,079 | INFO     | -- intersect: 115898642352.72556
[2025-06-06 17:29:05] 2025-06-06 21:28:45,079 | INFO     | current memory leak: -66.26 B/s (using 99 data points, chi2=0.09)
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | ..............................
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | . Timing measurements:
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | . get job = 0 s
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | . initial setup = 2 s
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | . payload setup = 12 s
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | . stage-in = 0 s
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | . payload execution = 7883 s
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | . stage-out = 0 s
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | . log creation = 0 s
[2025-06-06 17:29:05] 2025-06-06 21:28:45,080 | INFO     | ..............................
[2025-06-06 17:29:05] 2025-06-06 21:28:45,157 | INFO     | 
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | job summary report
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | --------------------------------------------------
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | PanDA job id: 6671652342
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | task id: 44871837
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | errors: (none)
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | pilot state: finished 
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | transexitcode: 0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | exeerrorcode: 0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | exeerrordiag: 
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | exitcode: 0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | exitmsg: OK
[2025-06-06 17:29:05] 2025-06-06 21:28:45,158 | INFO     | cpuconsumptiontime: 43080 s
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | nevents: 400
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | neventsw: 0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | pid: 89253
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | pgrp: 89253
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | corecount: 8
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | event service: False
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | sizes: {0: 2397115, 1: 2397370, 8: 2397576, 12: 2397604, 7899: 2425119, 7901: 2434244, 7918: 2434358}
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | --------------------------------------------------
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | 
[2025-06-06 17:29:05] 2025-06-06 21:28:45,159 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 17:29:05] 2025-06-06 21:28:45,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 17:29:05] 2025-06-06 21:28:45,181 | INFO     | job 6671652342 has completed (purged errors)
[2025-06-06 17:29:05] 2025-06-06 21:28:45,182 | INFO     | overall cleanup function is called
[2025-06-06 17:29:05] 2025-06-06 21:28:45,836 | INFO     | PID=81395 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 17:29:05] 2025-06-06 21:28:45,837 | INFO     | .. there are 13 such processes running
[2025-06-06 17:29:05] 2025-06-06 21:28:46,189 | INFO     | --- collectZombieJob: --- 10, [89253]
[2025-06-06 17:29:05] 2025-06-06 21:28:46,189 | INFO     | zombie collector waiting for pid 89253
[2025-06-06 17:29:05] 2025-06-06 21:28:46,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 17:29:05] 2025-06-06 21:28:46,189 | INFO     | collected zombie processes
[2025-06-06 17:29:05] 2025-06-06 21:28:46,189 | INFO     | will attempt to kill all subprocesses of pid=89253
[2025-06-06 17:29:05] 2025-06-06 21:28:46,383 | INFO     | process IDs to be killed: [89253] (in reverse order)
[2025-06-06 17:29:05] 2025-06-06 21:28:46,693 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 17:29:05] 2025-06-06 21:28:46,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 17:29:05] 2025-06-06 21:28:46,701 | INFO     | did not find any defunct processes belonging to 89253
[2025-06-06 17:29:05] 2025-06-06 21:28:46,724 | INFO     | did not find any defunct processes belonging to 89253
[2025-06-06 17:29:05] 2025-06-06 21:28:46,724 | INFO     | ready for new job
[2025-06-06 17:29:05] 2025-06-06 21:28:46,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 17:29:05] 2025-06-06 21:28:46,726 | INFO     | **************************************
[2025-06-06 17:29:05] 2025-06-06 21:28:46,726 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 17:29:05] 2025-06-06 21:28:46,726 | INFO     | **************************************
[2025-06-06 17:29:05] 2025-06-06 21:28:46,726 | INFO     | 
[2025-06-06 17:29:05] 2025-06-06 21:28:46,743 | INFO     | architecture information:
[2025-06-06 17:29:05] 2025-06-06 21:28:46,748 | INFO     | executing command: cat /etc/os-release
[2025-06-06 17:29:05] 2025-06-06 21:28:46,785 | INFO     | cat /etc/os-release:
[2025-06-06 17:29:05] NAME="CentOS Linux"
[2025-06-06 17:29:05] VERSION="7 (Core)"
[2025-06-06 17:29:05] ID="centos"
[2025-06-06 17:29:05] ID_LIKE="rhel fedora"
[2025-06-06 17:29:05] VERSION_ID="7"
[2025-06-06 17:29:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 17:29:05] ANSI_COLOR="0;31"
[2025-06-06 17:29:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 17:29:05] HOME_URL="https://www.centos.org/"
[2025-06-06 17:29:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 17:29:05] 
[2025-06-06 17:29:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 17:29:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 17:29:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 17:29:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 17:29:05] 
[2025-06-06 17:29:05] 2025-06-06 21:28:46,786 | INFO     | **************************************
[2025-06-06 17:29:05] 2025-06-06 21:28:47,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 17:29:05] 2025-06-06 21:28:47,317 | INFO     | sufficient remaining disk space (106661150720 B)
[2025-06-06 17:29:05] 2025-06-06 21:28:47,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 17:29:05] 2025-06-06 21:28:47,317 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 17:29:05] 2025-06-06 21:28:47,318 | INFO     | update_server=False
[2025-06-06 17:29:05] 2025-06-06 21:28:47,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 17:29:05] 2025-06-06 21:28:47,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 17:29:05] 2025-06-06 21:28:47,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:29:05] 2025-06-06 21:28:47,738 | INFO     | aborting loop
[2025-06-06 17:29:05] 2025-06-06 21:28:47,810 | INFO     | all data control threads have been joined
[2025-06-06 17:29:05] 2025-06-06 21:28:47,843 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 17:29:05] 2025-06-06 21:28:47,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 17:29:05] 2025-06-06 21:28:47,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 17:29:05] 2025-06-06 21:28:48,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 17:29:05] 2025-06-06 21:28:48,322 | INFO     | [job] retrieve thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:48,345 | INFO     | [job] validate thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:48,518 | INFO     | all payload control threads have been joined
[2025-06-06 17:29:05] 2025-06-06 21:28:48,744 | INFO     | [job] job monitor thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:48,809 | INFO     | all job control threads have been joined
[2025-06-06 17:29:05] 2025-06-06 21:28:48,816 | INFO     | [data] control thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:48,856 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:48,918 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:49,109 | INFO     | [payload] failed_post thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:49,456 | INFO     | [data] copytool_in thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:49,524 | INFO     | [payload] control thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:49,534 | INFO     | [payload] validate_post thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:49,591 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:49,815 | INFO     | [job] control thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:50,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:29:05] 2025-06-06 21:28:50,219 | INFO     | [data] copytool_out thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:51,177 | INFO     | [job] queue monitor thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:51,567 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:58,079 | INFO     | job.realtimelogging is not enabled
[2025-06-06 17:29:05] 2025-06-06 21:28:59,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 17:29:05] 2025-06-06 21:28:59,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090836367168)>', '<ExcThread(monitor, started 140090407900928)>']
[2025-06-06 17:29:05] 2025-06-06 21:28:59,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 17:29:05] 2025-06-06 21:28:59,911 | INFO     | [monitor] control thread has ended
[2025-06-06 17:29:05] 2025-06-06 21:29:04,771 | INFO     | all workflow threads have been joined
[2025-06-06 17:29:05] 2025-06-06 21:29:04,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 17:29:05] 2025-06-06 21:29:04,772 | INFO     | traces error code: 0
[2025-06-06 17:29:05] 2025-06-06 21:29:04,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 17:29:05] 2025-06-06 21:29:04,887 [wrapper] ==== pilot stdout END ====
[2025-06-06 17:29:05] 2025-06-06 21:29:04,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 17:29:05] 2025-06-06 21:29:04,903 [wrapper] pilotpid: 81395
[2025-06-06 17:29:05] 2025-06-06 21:29:04,950 [wrapper] Pilot exit status: 0
[2025-06-06 17:29:05] 2025-06-06 21:29:05,154 [wrapper] pandaids: 6671652342
[2025-06-06 17:29:05] 2025-06-06 21:29:05,252 [wrapper] cleanup supervisor_pilot 70597 81396
[2025-06-06 17:29:05] 2025-06-06 21:29:05,255 [wrapper] Test setup, not cleaning
[2025-06-06 17:29:05] 2025-06-06 21:29:05,257 [wrapper] apfmon messages muted
[2025-06-06 17:29:05] 2025-06-06 21:29:05,259 [wrapper] ==== wrapper stdout END ====
[2025-06-06 17:29:05] 2025-06-06 21:29:05,261 [wrapper] ==== wrapper stderr END ====
[2025-06-06 17:29:05]  *** Error codes and diagnostics ***
[2025-06-06 17:29:05]     "exeErrorCode": 0,
[2025-06-06 17:29:05]     "exeErrorDiag": "",
[2025-06-06 17:29:05]     "pilotErrorCode": 0,
[2025-06-06 17:29:05]     "pilotErrorDiag": "",
[2025-06-06 17:29:05]  *** Listing of results directory ***
[2025-06-06 17:29:05] total 419468
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas    495897 May 29 08:27 pilot3.tar.gz
[2025-06-06 17:29:05] -rwx------ 1 boincer umatlas     37140 May 29 09:04 runpilot2-wrapper.sh
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas      5111 May 29 09:04 queuedata.json
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas       100 Jun  6 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 17:29:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 15:16 run_atlas
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas       105 Jun  6 15:16 job.xml
[2025-06-06 17:29:05] -rw-r--r-- 2 boincer umatlas 226804674 Jun  6 15:16 EVNT.44871834._002954.pool.root.1
[2025-06-06 17:29:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 15:16 start_atlas.sh
[2025-06-06 17:29:05] drwxrwx--x 2 boincer umatlas      4096 Jun  6 15:16 shared
[2025-06-06 17:29:05] -rw-r--r-- 2 boincer umatlas    508878 Jun  6 15:16 input.tar.gz
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas         0 Jun  6 15:16 boinc_lockfile
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas      2559 Jun  6 15:16 pandaJob.out
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas    985748 Jun  6 15:16 agis_schedconf.cvmfs.json
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas   1598969 Jun  6 15:16 agis_ddmendpoints.agis.ALL.json
[2025-06-06 17:29:05] drwx------ 4 boincer umatlas      4096 Jun  6 15:16 pilot3
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas        95 Jun  6 17:27 pilot_heartbeat.json
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas 196726641 Jun  6 17:27 HITS.44871837._100472.pool.root.1
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas       529 Jun  6 17:27 boinc_task_state.xml
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas      6388 Jun  6 17:27 init_data.xml
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas      1075 Jun  6 17:28 memory_monitor_summary.json
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas    336505 Jun  6 17:28 log.44871837._100472.job.log.tgz.1
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas      7754 Jun  6 17:28 heartbeat.json
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 17:29 boinc_mmap_file
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas        27 Jun  6 17:29 wrapper_checkpoint.txt
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas      4426 Jun  6 17:29 pilotlog.txt
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas    745637 Jun  6 17:29 log.44871837._100472.job.log.1
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas       357 Jun  6 17:29 output.list
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas       620 Jun  6 17:29 runtime_log
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas   1105920 Jun  6 17:29 result.tar.gz
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas      8659 Jun  6 17:29 runtime_log.err
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas       659 Jun  6 17:29 FcMKDmv6re7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiEVKDmCiQGPn.diag
[2025-06-06 17:29:05] -rw-r--r-- 1 boincer umatlas     20802 Jun  6 17:29 stderr.txt
[2025-06-06 17:29:05] HITS file was successfully produced:
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas 196726641 Jun  6 17:27 shared/HITS.pool.root.1
[2025-06-06 17:29:05]  *** Contents of shared directory: ***
[2025-06-06 17:29:05] total 415212
[2025-06-06 17:29:05] -rw-r--r-- 2 boincer umatlas 226804674 Jun  6 15:16 ATLAS.root_0
[2025-06-06 17:29:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 15:16 start_atlas.sh
[2025-06-06 17:29:05] -rw-r--r-- 2 boincer umatlas    508878 Jun  6 15:16 input.tar.gz
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas 196726641 Jun  6 17:27 HITS.pool.root.1
[2025-06-06 17:29:05] -rw------- 1 boincer umatlas   1105920 Jun  6 17:29 result.tar.gz
17:29:07 (77746): run_atlas exited; CPU time 42731.039308
17:29:07 (77746): called boinc_finish(0)

</stderr_txt>
]]>

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