Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:10:11 (12880): wrapper (7.7.26015): starting
15:10:11 (12880): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 15:10:11] Arguments: --nthreads 12
[2025-06-06 15:10:11] Threads: 12
[2025-06-06 15:10:11] Checking for CVMFS
[2025-06-06 15:10:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 15:10:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 15:10:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 15:10:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 15:10:11] 2.11.2.0 3297 38917 89972 146872 0 1 19458861 20275200 1 130560 0 16407446 99.982 6650670 8106 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 15:10:11] CVMFS is ok
[2025-06-06 15:10:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:10:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:10:11] Further information can be found at the LHC@home message board.
[2025-06-06 15:10:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:10:11] Checking for apptainer binary...
[2025-06-06 15:10:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 15:10:11] Running /usr/bin/apptainer --version
[2025-06-06 15:10:11] apptainer version 1.3.2-1.el7
[2025-06-06 15:10:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:10:13] c-205-22.aglt2.org
[2025-06-06 15:10:13] apptainer works
[2025-06-06 15:10:13] Set ATHENA_PROC_NUMBER=12
[2025-06-06 15:10:13] Set ATHENA_CORE_NUMBER=12
[2025-06-06 15:10:13] Starting ATLAS job with PandaID=6669623573
[2025-06-06 15:10:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 16:51:03]  *** The last 200 lines of the pilot log: ***
[2025-06-06 16:51:03]  replicas=None
[2025-06-06 16:51:03]  scope=mc23_13p6TeV
[2025-06-06 16:51:03]  status=None
[2025-06-06 16:51:03]  status_code=0
[2025-06-06 16:51:03]  storage_token=
[2025-06-06 16:51:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669623573/log.44871837._097795.job.log.tgz.1
[2025-06-06 16:51:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/a4/log.44871837._097795.job.log.tgz.1
[2025-06-06 16:51:03]  workdir=None
[2025-06-06 16:51:03] ]
[2025-06-06 16:51:03] 2025-06-06 20:50:45,315 | INFO     | transferring file log.44871837._097795.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669623573/log.44871837._097795.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 16:51:03] 2025-06-06 20:50:45,316 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669623573/log.44871837._097795.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._097795.job
[2025-06-06 16:51:03] 2025-06-06 20:50:45,338 | INFO     | adding to output.list: log.44871837._097795.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/a4/log.44871837._097795.job.log.tg
[2025-06-06 16:51:03] 2025-06-06 20:50:45,339 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 16:51:03] 2025-06-06 20:50:45,339 | INFO     | summary of transferred files:
[2025-06-06 16:51:03] 2025-06-06 20:50:45,339 | INFO     |  -- lfn=log.44871837._097795.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 16:51:03] 2025-06-06 20:50:45,339 | INFO     | stage-out finished correctly
[2025-06-06 16:51:03] 2025-06-06 20:50:45,766 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 16:51:03] 2025-06-06 20:50:46,108 | INFO     | job 6669623573 has state=finished
[2025-06-06 16:51:03] 2025-06-06 20:50:46,108 | INFO     | preparing for final server update for job 6669623573 in state='finished'
[2025-06-06 16:51:03] 2025-06-06 20:50:46,109 | INFO     | this job has now completed (state=finished)
[2025-06-06 16:51:03] 2025-06-06 20:50:46,109 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 16:51:03] 2025-06-06 20:50:46,109 | INFO     | log transfer has been attempted: DONE
[2025-06-06 16:51:03] 2025-06-06 20:50:46,110 | INFO     | job 6669623573 has finished - writing final server update
[2025-06-06 16:51:03] 2025-06-06 20:50:46,110 | INFO     | total number of processed events: 400 (read)
[2025-06-06 16:51:03] 2025-06-06 20:50:46,112 | INFO     | executing command: lscpu
[2025-06-06 16:51:03] 2025-06-06 20:50:46,140 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 16:51:03] 2025-06-06 20:50:49,468 | WARNING  | process 22991 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 16:51:03] 2025-06-06 20:50:49,468 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669623573/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:51:03] 2025-06-06 20:50:49,469 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669623573/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:51:03] 2025-06-06 20:50:49,470 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4439699 B
[2025-06-06 16:51:03] 2025-06-06 20:50:49,470 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15787 B
[2025-06-06 16:51:03] 2025-06-06 20:50:49,470 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 16:51:03] 2025-06-06 20:50:50,728 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 16:51:03] 2025-06-06 20:50:50,729 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669623573/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:51:03] 2025-06-06 20:50:50,733 | INFO     | extracted standard info from prmon json
[2025-06-06 16:51:03] 2025-06-06 20:50:50,734 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 16:51:03] 2025-06-06 20:50:50,734 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 16:51:03] 2025-06-06 20:50:50,735 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 16:51:03] 2025-06-06 20:50:50,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 16:51:03] 2025-06-06 20:50:50,738 | INFO     | fitting pss+swap vs Time
[2025-06-06 16:51:03] 2025-06-06 20:50:50,738 | INFO     | sum of square deviations: 241429643.0
[2025-06-06 16:51:03] 2025-06-06 20:50:50,739 | INFO     | sum of deviations: 10386493454.499996
[2025-06-06 16:51:03] 2025-06-06 20:50:50,739 | INFO     | mean x: 1749240139.5
[2025-06-06 16:51:03] 2025-06-06 20:50:50,739 | INFO     | mean y: 2666144.967391304
[2025-06-06 16:51:03] 2025-06-06 20:50:50,739 | INFO     | -- intersect: -75251022811.80008
[2025-06-06 16:51:03] 2025-06-06 20:50:50,739 | INFO     | intersect: -75251022811.80008
[2025-06-06 16:51:03] 2025-06-06 20:50:50,740 | INFO     | chi2: 0.2719967223104528
[2025-06-06 16:51:03] 2025-06-06 20:50:50,740 | INFO     | -- intersect: -75251022811.80008
[2025-06-06 16:51:03] 2025-06-06 20:50:50,740 | INFO     | current memory leak: 43.02 B/s (using 92 data points, chi2=0.27)
[2025-06-06 16:51:03] 2025-06-06 20:50:50,740 | INFO     | ..............................
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | . Timing measurements:
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | . get job = 0 s
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | . initial setup = 2 s
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | . payload setup = 9 s
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | . stage-in = 0 s
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | . payload execution = 5986 s
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | . stage-out = 0 s
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | . log creation = 0 s
[2025-06-06 16:51:03] 2025-06-06 20:50:50,741 | INFO     | ..............................
[2025-06-06 16:51:03] 2025-06-06 20:50:50,771 | INFO     | sufficient remaining disk space (29376905216 B)
[2025-06-06 16:51:03] 2025-06-06 20:50:50,786 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-06 16:51:03] 2025-06-06 20:50:50,828 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6669623573: 4747685 B (within 2537553920 B limit)
[2025-06-06 16:51:03] 2025-06-06 20:50:50,828 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6669623573/HITS.44871837._097795.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-06 16:51:03] 2025-06-06 20:50:50,828 | INFO     | total size of present files: 0 B (workdir size: 4747685 B)
[2025-06-06 16:51:03] 2025-06-06 20:50:50,828 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6669623573/HITS.44871837._097795.pool.root.1 since it does not exist
[2025-06-06 16:51:03] 2025-06-06 20:50:50,917 | INFO     | number of running child processes to parent process 22991: 1
[2025-06-06 16:51:03] 2025-06-06 20:50:50,917 | INFO     | maximum number of monitored processes: 6
[2025-06-06 16:51:03] 2025-06-06 20:50:50,917 | INFO     | aborting job monitoring since job object (job id=6669623573) has expired
[2025-06-06 16:51:03] 2025-06-06 20:50:51,125 | INFO     | 
[2025-06-06 16:51:03] 2025-06-06 20:50:51,125 | INFO     | job summary report
[2025-06-06 16:51:03] 2025-06-06 20:50:51,125 | INFO     | --------------------------------------------------
[2025-06-06 16:51:03] 2025-06-06 20:50:51,126 | INFO     | PanDA job id: 6669623573
[2025-06-06 16:51:03] 2025-06-06 20:50:51,126 | INFO     | task id: 44871837
[2025-06-06 16:51:03] 2025-06-06 20:50:51,126 | INFO     | errors: (none)
[2025-06-06 16:51:03] 2025-06-06 20:50:51,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 16:51:03] 2025-06-06 20:50:51,126 | INFO     | pilot state: finished 
[2025-06-06 16:51:03] 2025-06-06 20:50:51,126 | INFO     | transexitcode: 0
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | exeerrorcode: 0
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | exeerrordiag: 
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | exitcode: 0
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | exitmsg: OK
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | cpuconsumptiontime: 61915 s
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | nevents: 400
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | neventsw: 0
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | pid: 22991
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | pgrp: 22991
[2025-06-06 16:51:03] 2025-06-06 20:50:51,127 | INFO     | corecount: 12
[2025-06-06 16:51:03] 2025-06-06 20:50:51,128 | INFO     | event service: False
[2025-06-06 16:51:03] 2025-06-06 20:50:51,128 | INFO     | sizes: {0: 2397220, 1: 2397419, 5: 2397625, 11: 2397681, 5999: 2424265, 6002: 2433390, 6007: 2433504}
[2025-06-06 16:51:03] 2025-06-06 20:50:51,128 | INFO     | --------------------------------------------------
[2025-06-06 16:51:03] 2025-06-06 20:50:51,128 | INFO     | 
[2025-06-06 16:51:03] 2025-06-06 20:50:51,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 16:51:03] 2025-06-06 20:50:51,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 16:51:03] 2025-06-06 20:50:51,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,155 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 16:51:03] 2025-06-06 20:50:51,155 | INFO     | job 6669623573 has completed (purged errors)
[2025-06-06 16:51:03] 2025-06-06 20:50:51,155 | INFO     | overall cleanup function is called
[2025-06-06 16:51:03] 2025-06-06 20:50:52,163 | INFO     | --- collectZombieJob: --- 10, [22991]
[2025-06-06 16:51:03] 2025-06-06 20:50:52,163 | INFO     | zombie collector waiting for pid 22991
[2025-06-06 16:51:03] 2025-06-06 20:50:52,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 16:51:03] 2025-06-06 20:50:52,164 | INFO     | collected zombie processes
[2025-06-06 16:51:03] 2025-06-06 20:50:52,164 | INFO     | will attempt to kill all subprocesses of pid=22991
[2025-06-06 16:51:03] 2025-06-06 20:50:52,253 | INFO     | process IDs to be killed: [22991] (in reverse order)
[2025-06-06 16:51:03] 2025-06-06 20:50:52,301 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 16:51:03] 2025-06-06 20:50:52,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 16:51:03] 2025-06-06 20:50:52,305 | INFO     | did not find any defunct processes belonging to 22991
[2025-06-06 16:51:03] 2025-06-06 20:50:52,308 | INFO     | did not find any defunct processes belonging to 22991
[2025-06-06 16:51:03] 2025-06-06 20:50:52,308 | INFO     | ready for new job
[2025-06-06 16:51:03] 2025-06-06 20:50:52,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 16:51:03] 2025-06-06 20:50:52,309 | INFO     | **************************************
[2025-06-06 16:51:03] 2025-06-06 20:50:52,309 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 16:51:03] 2025-06-06 20:50:52,309 | INFO     | **************************************
[2025-06-06 16:51:03] 2025-06-06 20:50:52,309 | INFO     | 
[2025-06-06 16:51:03] 2025-06-06 20:50:52,310 | INFO     | architecture information:
[2025-06-06 16:51:03] 2025-06-06 20:50:52,311 | INFO     | executing command: cat /etc/os-release
[2025-06-06 16:51:03] 2025-06-06 20:50:52,325 | INFO     | cat /etc/os-release:
[2025-06-06 16:51:03] NAME="CentOS Linux"
[2025-06-06 16:51:03] VERSION="7 (Core)"
[2025-06-06 16:51:03] ID="centos"
[2025-06-06 16:51:03] ID_LIKE="rhel fedora"
[2025-06-06 16:51:03] VERSION_ID="7"
[2025-06-06 16:51:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 16:51:03] ANSI_COLOR="0;31"
[2025-06-06 16:51:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 16:51:03] HOME_URL="https://www.centos.org/"
[2025-06-06 16:51:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 16:51:03] 
[2025-06-06 16:51:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 16:51:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 16:51:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 16:51:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 16:51:03] 
[2025-06-06 16:51:03] 2025-06-06 20:50:52,325 | INFO     | **************************************
[2025-06-06 16:51:03] 2025-06-06 20:50:52,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 16:51:03] 2025-06-06 20:50:52,843 | INFO     | sufficient remaining disk space (29382148096 B)
[2025-06-06 16:51:03] 2025-06-06 20:50:52,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 16:51:03] 2025-06-06 20:50:52,843 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 16:51:03] 2025-06-06 20:50:52,844 | INFO     | update_server=False
[2025-06-06 16:51:03] 2025-06-06 20:50:52,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 16:51:03] 2025-06-06 20:50:52,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 16:51:03] 2025-06-06 20:50:52,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:51:03] 2025-06-06 20:50:52,845 | INFO     | aborting loop
[2025-06-06 16:51:03] 2025-06-06 20:50:53,125 | INFO     | all data control threads have been joined
[2025-06-06 16:51:03] 2025-06-06 20:50:53,247 | INFO     | all job control threads have been joined
[2025-06-06 16:51:03] 2025-06-06 20:50:53,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 16:51:03] 2025-06-06 20:50:53,446 | INFO     | all payload control threads have been joined
[2025-06-06 16:51:03] 2025-06-06 20:50:53,808 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 16:51:03] 2025-06-06 20:50:53,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 16:51:03] 2025-06-06 20:50:53,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 16:51:03] 2025-06-06 20:50:53,849 | INFO     | [job] retrieve thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:53,850 | INFO     | [job] job monitor thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:54,130 | INFO     | [data] control thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:54,253 | INFO     | [job] control thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:54,355 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:54,449 | INFO     | [payload] control thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:54,545 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:54,599 | INFO     | [data] copytool_in thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:54,627 | INFO     | [payload] failed_post thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:54,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:55,329 | INFO     | [job] validate thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:55,335 | INFO     | [payload] validate_post thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:55,341 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:55,437 | INFO     | [data] copytool_out thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:55,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:51:03] 2025-06-06 20:50:56,844 | INFO     | [job] queue monitor thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:56,850 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 16:51:03] 2025-06-06 20:50:57,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140089635170112)>', '<ExcThread(monitor, started 140088663070464)>']
[2025-06-06 16:51:03] 2025-06-06 20:50:57,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 16:51:03] 2025-06-06 20:50:57,829 | INFO     | [monitor] control thread has ended
[2025-06-06 16:51:03] 2025-06-06 20:51:02,786 | INFO     | all workflow threads have been joined
[2025-06-06 16:51:03] 2025-06-06 20:51:02,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 16:51:03] 2025-06-06 20:51:02,787 | INFO     | traces error code: 0
[2025-06-06 16:51:03] 2025-06-06 20:51:02,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 16:51:03] 2025-06-06 20:51:02,867 [wrapper] ==== pilot stdout END ====
[2025-06-06 16:51:03] 2025-06-06 20:51:02,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 16:51:03] 2025-06-06 20:51:02,875 [wrapper] pilotpid: 16469
[2025-06-06 16:51:03] 2025-06-06 20:51:02,878 [wrapper] Pilot exit status: 0
[2025-06-06 16:51:03] 2025-06-06 20:51:02,894 [wrapper] pandaids: 6669623573
[2025-06-06 16:51:03] 2025-06-06 20:51:02,934 [wrapper] cleanup supervisor_pilot  9471 16470
[2025-06-06 16:51:03] 2025-06-06 20:51:02,938 [wrapper] Test setup, not cleaning
[2025-06-06 16:51:03] 2025-06-06 20:51:02,942 [wrapper] apfmon messages muted
[2025-06-06 16:51:03] 2025-06-06 20:51:02,946 [wrapper] ==== wrapper stdout END ====
[2025-06-06 16:51:03] 2025-06-06 20:51:02,950 [wrapper] ==== wrapper stderr END ====
[2025-06-06 16:51:03]  *** Error codes and diagnostics ***
[2025-06-06 16:51:03]     "exeErrorCode": 0,
[2025-06-06 16:51:03]     "exeErrorDiag": "",
[2025-06-06 16:51:03]     "pilotErrorCode": 0,
[2025-06-06 16:51:03]     "pilotErrorDiag": "",
[2025-06-06 16:51:03]  *** Listing of results directory ***
[2025-06-06 16:51:03] total 419764
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas    495897 May 29 04:32 pilot3.tar.gz
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas      5111 May 29 04:43 queuedata.json
[2025-06-06 16:51:03] -rwx------ 1 boincer umatlas     37140 May 29 04:44 runpilot2-wrapper.sh
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas       100 Jun  6 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 16:51:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 15:10 run_atlas
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas       105 Jun  6 15:10 job.xml
[2025-06-06 16:51:03] -rw-r--r-- 2 boincer umatlas 223984145 Jun  6 15:10 EVNT.44871834._003717.pool.root.1
[2025-06-06 16:51:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 15:10 start_atlas.sh
[2025-06-06 16:51:03] drwxrwx--x 2 boincer umatlas      4096 Jun  6 15:10 shared
[2025-06-06 16:51:03] -rw-r--r-- 2 boincer umatlas    508875 Jun  6 15:10 input.tar.gz
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas         0 Jun  6 15:10 boinc_lockfile
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas      2558 Jun  6 15:10 pandaJob.out
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas    985756 Jun  6 15:10 agis_schedconf.cvmfs.json
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas   1598969 Jun  6 15:10 agis_ddmendpoints.agis.ALL.json
[2025-06-06 16:51:03] drwx------ 4 boincer umatlas      4096 Jun  6 15:10 pilot3
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas      5867 Jun  6 16:45 init_data.xml
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas 200138433 Jun  6 16:50 HITS.44871837._097795.pool.root.1
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas      1060 Jun  6 16:50 memory_monitor_summary.json
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas        95 Jun  6 16:50 pilot_heartbeat.json
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 16:50 boinc_mmap_file
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas    383258 Jun  6 16:50 log.44871837._097795.job.log.tgz.1
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas        27 Jun  6 16:50 wrapper_checkpoint.txt
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas       530 Jun  6 16:50 boinc_task_state.xml
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas      7750 Jun  6 16:50 heartbeat.json
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas      4353 Jun  6 16:51 pilotlog.txt
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas    561536 Jun  6 16:51 log.44871837._097795.job.log.1
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas       357 Jun  6 16:51 output.list
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas       620 Jun  6 16:51 runtime_log
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas    962560 Jun  6 16:51 result.tar.gz
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas      8661 Jun  6 16:51 runtime_log.err
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas       660 Jun  6 16:51 m9xLDmb3ne7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSCeKDmbXjYDn.diag
[2025-06-06 16:51:03] -rw-r--r-- 1 boincer umatlas     22024 Jun  6 16:51 stderr.txt
[2025-06-06 16:51:03] HITS file was successfully produced:
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas 200138433 Jun  6 16:50 shared/HITS.pool.root.1
[2025-06-06 16:51:03]  *** Contents of shared directory: ***
[2025-06-06 16:51:03] total 415644
[2025-06-06 16:51:03] -rw-r--r-- 2 boincer umatlas 223984145 Jun  6 15:10 ATLAS.root_0
[2025-06-06 16:51:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 15:10 start_atlas.sh
[2025-06-06 16:51:03] -rw-r--r-- 2 boincer umatlas    508875 Jun  6 15:10 input.tar.gz
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas 200138433 Jun  6 16:50 HITS.pool.root.1
[2025-06-06 16:51:03] -rw------- 1 boincer umatlas    962560 Jun  6 16:51 result.tar.gz
16:51:05 (12880): run_atlas exited; CPU time 61889.022850
16:51:05 (12880): called boinc_finish(0)

</stderr_txt>
]]>

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