Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:03:54 (3627115): wrapper (7.7.26015): starting
15:03:54 (3627115): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 15:03:54] Arguments: --nthreads 12
[2025-06-06 15:03:54] Threads: 12
[2025-06-06 15:03:54] Checking for CVMFS
[2025-06-06 15:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 15:03:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 15:03:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 15:03:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 15:03:54] 2.12.6.0 84603 3047 281260 146872 1 784 18574363 25181185 18224 16776704 0 10456846 98.865 28724807 19335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 15:03:54] CVMFS is ok
[2025-06-06 15:03:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:03:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:03:54] Further information can be found at the LHC@home message board.
[2025-06-06 15:03:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:03:54] Checking for apptainer binary...
[2025-06-06 15:03:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 15:03:54] Running /usr/bin/apptainer --version
[2025-06-06 15:03:54] apptainer version 1.4.1-1.el9
[2025-06-06 15:03:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:03:54] c-16-37.aglt2.org
[2025-06-06 15:03:54] apptainer works
[2025-06-06 15:03:54] Set ATHENA_PROC_NUMBER=12
[2025-06-06 15:03:54] Set ATHENA_CORE_NUMBER=12
[2025-06-06 15:03:54] Starting ATLAS job with PandaID=6671162384
[2025-06-06 15:03:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 17:33:25]  *** The last 200 lines of the pilot log: ***
[2025-06-06 17:33:25] 2025-06-06 21:33:11,654 | INFO     | sum of square deviations: 964988745.9452049
[2025-06-06 17:33:25] 2025-06-06 21:33:11,655 | INFO     | sum of deviations: 12978868256.945202
[2025-06-06 17:33:25] 2025-06-06 21:33:11,655 | INFO     | mean x: 1749241097.5616438
[2025-06-06 17:33:25] 2025-06-06 21:33:11,655 | INFO     | mean y: 2320486.5616438356
[2025-06-06 17:33:25] 2025-06-06 21:33:11,655 | INFO     | -- intersect: -23524554671.603115
[2025-06-06 17:33:25] 2025-06-06 21:33:11,655 | INFO     | intersect: -23524554671.603115
[2025-06-06 17:33:25] 2025-06-06 21:33:11,656 | INFO     | chi2: 1.7022916070914649
[2025-06-06 17:33:25] 2025-06-06 21:33:11,656 | INFO     | sum of square deviations: 869203648.4255326
[2025-06-06 17:33:25] 2025-06-06 21:33:11,657 | INFO     | sum of deviations: 14720439745.170197
[2025-06-06 17:33:25] 2025-06-06 21:33:11,657 | INFO     | mean x: 1749240945.06383
[2025-06-06 17:33:25] 2025-06-06 21:33:11,657 | INFO     | mean y: 2323189.0921985814
[2025-06-06 17:33:25] 2025-06-06 21:33:11,657 | INFO     | -- intersect: -29622030066.027313
[2025-06-06 17:33:25] 2025-06-06 21:33:11,658 | INFO     | intersect: -29622030066.027313
[2025-06-06 17:33:25] 2025-06-06 21:33:11,658 | INFO     | chi2: 1.6866175988791938
[2025-06-06 17:33:25] 2025-06-06 21:33:11,658 | INFO     | current chi2=1.6866175988791938 (change=0.9207592957032584 %)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,658 | INFO     | right removable region: 140
[2025-06-06 17:33:25] 2025-06-06 21:33:11,659 | INFO     | sum of square deviations: 869198158.4255326
[2025-06-06 17:33:25] 2025-06-06 21:33:11,659 | INFO     | sum of deviations: -9833628657.893618
[2025-06-06 17:33:25] 2025-06-06 21:33:11,660 | INFO     | mean x: 1749241250.06383
[2025-06-06 17:33:25] 2025-06-06 21:33:11,660 | INFO     | mean y: 2356363.0992907803
[2025-06-06 17:33:25] 2025-06-06 21:33:11,660 | INFO     | -- intersect: 19792307272.976925
[2025-06-06 17:33:25] 2025-06-06 21:33:11,660 | INFO     | intersect: 19792307272.976925
[2025-06-06 17:33:25] 2025-06-06 21:33:11,660 | INFO     | chi2: 0.1637725520307207
[2025-06-06 17:33:25] 2025-06-06 21:33:11,660 | INFO     | current chi2=0.1637725520307207 (change=90.37928922703541 %)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,661 | INFO     | sum of square deviations: 779965833.4044125
[2025-06-06 17:33:25] 2025-06-06 21:33:11,661 | INFO     | sum of deviations: -5580604251.323529
[2025-06-06 17:33:25] 2025-06-06 21:33:11,662 | INFO     | mean x: 1749241402.5661764
[2025-06-06 17:33:25] 2025-06-06 21:33:11,662 | INFO     | mean y: 2348978.1470588236
[2025-06-06 17:33:25] 2025-06-06 21:33:11,662 | INFO     | -- intersect: 12518056192.068605
[2025-06-06 17:33:25] 2025-06-06 21:33:11,662 | INFO     | intersect: 12518056192.068605
[2025-06-06 17:33:25] 2025-06-06 21:33:11,662 | INFO     | chi2: 0.11121605978812181
[2025-06-06 17:33:25] 2025-06-06 21:33:11,662 | INFO     | current chi2=0.11121605978812181 (change=32.09114811420918 %)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,663 | INFO     | sum of square deviations: 697059208.3816772
[2025-06-06 17:33:25] 2025-06-06 21:33:11,663 | INFO     | sum of deviations: -1930921167.3893135
[2025-06-06 17:33:25] 2025-06-06 21:33:11,664 | INFO     | mean x: 1749241555.0687022
[2025-06-06 17:33:25] 2025-06-06 21:33:11,664 | INFO     | mean y: 2342415.709923664
[2025-06-06 17:33:25] 2025-06-06 21:33:11,664 | INFO     | -- intersect: 4847910058.953385
[2025-06-06 17:33:25] 2025-06-06 21:33:11,664 | INFO     | intersect: 4847910058.953385
[2025-06-06 17:33:25] 2025-06-06 21:33:11,664 | INFO     | chi2: 0.04627672534847863
[2025-06-06 17:33:25] 2025-06-06 21:33:11,664 | INFO     | current chi2=0.04627672534847863 (change=58.39024918106196 %)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,665 | INFO     | sum of square deviations: 620245720.857143
[2025-06-06 17:33:25] 2025-06-06 21:33:11,666 | INFO     | sum of deviations: -2742406924.4285707
[2025-06-06 17:33:25] 2025-06-06 21:33:11,666 | INFO     | mean x: 1749241707.5714285
[2025-06-06 17:33:25] 2025-06-06 21:33:11,666 | INFO     | mean y: 2344026.76984127
[2025-06-06 17:33:25] 2025-06-06 21:33:11,666 | INFO     | -- intersect: 7736589358.948494
[2025-06-06 17:33:25] 2025-06-06 21:33:11,666 | INFO     | intersect: 7736589358.948494
[2025-06-06 17:33:25] 2025-06-06 21:33:11,666 | INFO     | chi2: 0.04339157118165064
[2025-06-06 17:33:25] 2025-06-06 21:33:11,667 | INFO     | current chi2=0.04339157118165064 (change=6.234568554930909 %)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,667 | INFO     | left removable region: 40
[2025-06-06 17:33:25] 2025-06-06 21:33:11,667 | INFO     | sum of square deviations: 310046172.1899992
[2025-06-06 17:33:25] 2025-06-06 21:33:11,667 | INFO     | sum of deviations: -540163180.6100001
[2025-06-06 17:33:25] 2025-06-06 21:33:11,668 | INFO     | mean x: 1749242134.59
[2025-06-06 17:33:25] 2025-06-06 21:33:11,668 | INFO     | mean y: 2346612.79
[2025-06-06 17:33:25] 2025-06-06 21:33:11,668 | INFO     | -- intersect: 3049880431.392125
[2025-06-06 17:33:25] 2025-06-06 21:33:11,668 | INFO     | intersect: 3049880431.392125
[2025-06-06 17:33:25] 2025-06-06 21:33:11,668 | INFO     | chi2: 0.02139138637772638
[2025-06-06 17:33:25] 2025-06-06 21:33:11,668 | INFO     | -- intersect: 3049880431.392125
[2025-06-06 17:33:25] 2025-06-06 21:33:11,669 | INFO     | current memory leak: -1.74 B/s (using 100 data points, chi2=0.02)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,669 | INFO     | ..............................
[2025-06-06 17:33:25] 2025-06-06 21:33:11,669 | INFO     | . Timing measurements:
[2025-06-06 17:33:25] 2025-06-06 21:33:11,670 | INFO     | . get job = 0 s
[2025-06-06 17:33:25] 2025-06-06 21:33:11,670 | INFO     | . initial setup = 3 s
[2025-06-06 17:33:25] 2025-06-06 21:33:11,670 | INFO     | . payload setup = 7 s
[2025-06-06 17:33:25] 2025-06-06 21:33:11,670 | INFO     | . stage-in = 0 s
[2025-06-06 17:33:25] 2025-06-06 21:33:11,670 | INFO     | . payload execution = 8906 s
[2025-06-06 17:33:25] 2025-06-06 21:33:11,670 | INFO     | . stage-out = 1 s
[2025-06-06 17:33:25] 2025-06-06 21:33:11,670 | INFO     | . log creation = 0 s
[2025-06-06 17:33:25] 2025-06-06 21:33:11,670 | INFO     | ..............................
[2025-06-06 17:33:25] 2025-06-06 21:33:11,780 | INFO     | 
[2025-06-06 17:33:25] 2025-06-06 21:33:11,780 | INFO     | job summary report
[2025-06-06 17:33:25] 2025-06-06 21:33:11,780 | INFO     | --------------------------------------------------
[2025-06-06 17:33:25] 2025-06-06 21:33:11,781 | INFO     | PanDA job id: 6671162384
[2025-06-06 17:33:25] 2025-06-06 21:33:11,781 | INFO     | task id: 44871837
[2025-06-06 17:33:25] 2025-06-06 21:33:11,781 | INFO     | errors: (none)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 17:33:25] 2025-06-06 21:33:11,781 | INFO     | pilot state: finished 
[2025-06-06 17:33:25] 2025-06-06 21:33:11,781 | INFO     | transexitcode: 0
[2025-06-06 17:33:25] 2025-06-06 21:33:11,782 | INFO     | exeerrorcode: 0
[2025-06-06 17:33:25] 2025-06-06 21:33:11,782 | INFO     | exeerrordiag: 
[2025-06-06 17:33:25] 2025-06-06 21:33:11,782 | INFO     | exitcode: 0
[2025-06-06 17:33:25] 2025-06-06 21:33:11,782 | INFO     | exitmsg: OK
[2025-06-06 17:33:25] 2025-06-06 21:33:11,782 | INFO     | cpuconsumptiontime: 66340 s
[2025-06-06 17:33:25] 2025-06-06 21:33:11,782 | INFO     | nevents: 400
[2025-06-06 17:33:25] 2025-06-06 21:33:11,782 | INFO     | neventsw: 0
[2025-06-06 17:33:25] 2025-06-06 21:33:11,782 | INFO     | pid: 3637641
[2025-06-06 17:33:25] 2025-06-06 21:33:11,783 | INFO     | pgrp: 3637641
[2025-06-06 17:33:25] 2025-06-06 21:33:11,783 | INFO     | corecount: 12
[2025-06-06 17:33:25] 2025-06-06 21:33:11,783 | INFO     | event service: False
[2025-06-06 17:33:25] 2025-06-06 21:33:11,783 | INFO     | sizes: {0: 2397342, 6: 2397548, 11: 2397576, 8918: 2425608, 8920: 2434549, 8923: 2434605, 8930: 2434903}
[2025-06-06 17:33:25] 2025-06-06 21:33:11,783 | INFO     | --------------------------------------------------
[2025-06-06 17:33:25] 2025-06-06 21:33:11,783 | INFO     | 
[2025-06-06 17:33:25] 2025-06-06 21:33:11,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 17:33:25] 2025-06-06 21:33:11,804 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,805 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,805 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,805 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,805 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,805 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,805 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,805 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,806 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,806 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,807 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,807 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 17:33:25] 2025-06-06 21:33:11,807 | INFO     | job 6671162384 has completed (purged errors)
[2025-06-06 17:33:25] 2025-06-06 21:33:11,807 | INFO     | overall cleanup function is called
[2025-06-06 17:33:25] 2025-06-06 21:33:12,816 | INFO     | --- collectZombieJob: --- 10, [3637641]
[2025-06-06 17:33:25] 2025-06-06 21:33:12,859 | INFO     | zombie collector waiting for pid 3637641
[2025-06-06 17:33:25] 2025-06-06 21:33:12,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 17:33:25] 2025-06-06 21:33:12,860 | INFO     | collected zombie processes
[2025-06-06 17:33:25] 2025-06-06 21:33:12,860 | INFO     | will attempt to kill all subprocesses of pid=3637641
[2025-06-06 17:33:25] 2025-06-06 21:33:13,247 | INFO     | process IDs to be killed: [3637641] (in reverse order)
[2025-06-06 17:33:25] 2025-06-06 21:33:13,359 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 17:33:25] 2025-06-06 21:33:13,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 17:33:25] 2025-06-06 21:33:13,376 | INFO     | did not find any defunct processes belonging to 3637641
[2025-06-06 17:33:25] 2025-06-06 21:33:13,390 | INFO     | did not find any defunct processes belonging to 3637641
[2025-06-06 17:33:25] 2025-06-06 21:33:13,390 | INFO     | ready for new job
[2025-06-06 17:33:25] 2025-06-06 21:33:13,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 17:33:25] 2025-06-06 21:33:13,393 | INFO     | **************************************
[2025-06-06 17:33:25] 2025-06-06 21:33:13,393 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 17:33:25] 2025-06-06 21:33:13,393 | INFO     | **************************************
[2025-06-06 17:33:25] 2025-06-06 21:33:13,393 | INFO     | 
[2025-06-06 17:33:25] 2025-06-06 21:33:13,408 | INFO     | architecture information:
[2025-06-06 17:33:25] 2025-06-06 21:33:13,409 | INFO     | executing command: cat /etc/os-release
[2025-06-06 17:33:25] 2025-06-06 21:33:13,427 | INFO     | cat /etc/os-release:
[2025-06-06 17:33:25] NAME="CentOS Linux"
[2025-06-06 17:33:25] VERSION="7 (Core)"
[2025-06-06 17:33:25] ID="centos"
[2025-06-06 17:33:25] ID_LIKE="rhel fedora"
[2025-06-06 17:33:25] VERSION_ID="7"
[2025-06-06 17:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 17:33:25] ANSI_COLOR="0;31"
[2025-06-06 17:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 17:33:25] HOME_URL="https://www.centos.org/"
[2025-06-06 17:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 17:33:25] 
[2025-06-06 17:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 17:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 17:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 17:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 17:33:25] 
[2025-06-06 17:33:25] 2025-06-06 21:33:13,428 | INFO     | **************************************
[2025-06-06 17:33:25] 2025-06-06 21:33:13,931 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 17:33:25] 2025-06-06 21:33:13,948 | INFO     | sufficient remaining disk space (64546144256 B)
[2025-06-06 17:33:25] 2025-06-06 21:33:13,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 17:33:25] 2025-06-06 21:33:13,949 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 17:33:25] 2025-06-06 21:33:13,949 | INFO     | update_server=False
[2025-06-06 17:33:25] 2025-06-06 21:33:13,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 17:33:25] 2025-06-06 21:33:13,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 17:33:25] 2025-06-06 21:33:13,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:33:25] 2025-06-06 21:33:13,950 | INFO     | aborting loop
[2025-06-06 17:33:25] 2025-06-06 21:33:14,107 | INFO     | all job control threads have been joined
[2025-06-06 17:33:25] 2025-06-06 21:33:14,169 | INFO     | all data control threads have been joined
[2025-06-06 17:33:25] 2025-06-06 21:33:14,955 | INFO     | [job] retrieve thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:14,955 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 17:33:25] 2025-06-06 21:33:14,956 | INFO     | [job] job monitor thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:14,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 17:33:25] 2025-06-06 21:33:14,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 17:33:25] 2025-06-06 21:33:14,997 | INFO     | [data] copytool_in thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:15,023 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:15,113 | INFO     | [job] control thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:15,174 | INFO     | [data] control thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:15,362 | INFO     | [payload] validate_post thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:15,386 | INFO     | all payload control threads have been joined
[2025-06-06 17:33:25] 2025-06-06 21:33:15,664 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:15,861 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:15,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 17:33:25] 2025-06-06 21:33:15,955 | INFO     | [data] copytool_out thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:16,099 | INFO     | [job] validate thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:16,132 | INFO     | [payload] failed_post thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:16,316 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:16,392 | INFO     | [payload] control thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:16,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:33:25] 2025-06-06 21:33:17,795 | INFO     | [job] queue monitor thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:19,898 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 17:33:25] 2025-06-06 21:33:20,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241217857344)>', '<ExcThread(monitor, started 140240589145856)>']
[2025-06-06 17:33:25] 2025-06-06 21:33:20,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 17:33:25] 2025-06-06 21:33:20,986 | INFO     | [monitor] control thread has ended
[2025-06-06 17:33:25] 2025-06-06 21:33:25,504 | INFO     | all workflow threads have been joined
[2025-06-06 17:33:25] 2025-06-06 21:33:25,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 17:33:25] 2025-06-06 21:33:25,515 | INFO     | traces error code: 0
[2025-06-06 17:33:25] 2025-06-06 21:33:25,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 17:33:25] 2025-06-06 21:33:25,668 [wrapper] ==== pilot stdout END ====
[2025-06-06 17:33:25] 2025-06-06 21:33:25,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 17:33:25] 2025-06-06 21:33:25,674 [wrapper] pilotpid: 3630746
[2025-06-06 17:33:25] 2025-06-06 21:33:25,676 [wrapper] Pilot exit status: 0
[2025-06-06 17:33:25] 2025-06-06 21:33:25,691 [wrapper] pandaids: 6671162384
[2025-06-06 17:33:25] 2025-06-06 21:33:25,760 [wrapper] cleanup supervisor_pilot   30126 3630747
[2025-06-06 17:33:25] 2025-06-06 21:33:25,764 [wrapper] Test setup, not cleaning
[2025-06-06 17:33:25] 2025-06-06 21:33:25,767 [wrapper] apfmon messages muted
[2025-06-06 17:33:25] 2025-06-06 21:33:25,770 [wrapper] ==== wrapper stdout END ====
[2025-06-06 17:33:25] 2025-06-06 21:33:25,773 [wrapper] ==== wrapper stderr END ====
[2025-06-06 17:33:25]  *** Error codes and diagnostics ***
[2025-06-06 17:33:25]     "exeErrorCode": 0,
[2025-06-06 17:33:25]     "exeErrorDiag": "",
[2025-06-06 17:33:25]     "pilotErrorCode": 0,
[2025-06-06 17:33:25]     "pilotErrorDiag": "",
[2025-06-06 17:33:25]  *** Listing of results directory ***
[2025-06-06 17:33:25] total 418448
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas    495897 May 29 08:12 pilot3.tar.gz
[2025-06-06 17:33:25] -rwx------. 1 boincer umatlas     37140 May 29 08:23 runpilot2-wrapper.sh
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas      5111 May 29 08:23 queuedata.json
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas       100 Jun  6 15:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 17:33:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 15:03 run_atlas
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas       105 Jun  6 15:03 job.xml
[2025-06-06 17:33:25] -rw-r--r--. 2 boincer umatlas 226888026 Jun  6 15:03 EVNT.44871834._002464.pool.root.1
[2025-06-06 17:33:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 15:03 start_atlas.sh
[2025-06-06 17:33:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 15:03 shared
[2025-06-06 17:33:25] -rw-r--r--. 2 boincer umatlas    508887 Jun  6 15:03 input.tar.gz
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas         0 Jun  6 15:03 boinc_lockfile
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 15:03 pandaJob.out
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas    985756 Jun  6 15:04 agis_schedconf.cvmfs.json
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas   1598969 Jun  6 15:04 agis_ddmendpoints.agis.ALL.json
[2025-06-06 17:33:25] drwx------. 4 boincer umatlas      4096 Jun  6 15:04 pilot3
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas      6609 Jun  6 17:30 init_data.xml
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas 195363054 Jun  6 17:32 HITS.44871837._100073.pool.root.1
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas       529 Jun  6 17:32 boinc_task_state.xml
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas        95 Jun  6 17:32 pilot_heartbeat.json
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas      1041 Jun  6 17:32 memory_monitor_summary.json
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas    398826 Jun  6 17:33 log.44871837._100073.job.log.tgz.1
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas      7717 Jun  6 17:33 heartbeat.json
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 17:33 boinc_mmap_file
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas        27 Jun  6 17:33 wrapper_checkpoint.txt
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas      4353 Jun  6 17:33 pilotlog.txt
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas    805501 Jun  6 17:33 log.44871837._100073.job.log.1
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas       357 Jun  6 17:33 output.list
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas       620 Jun  6 17:33 runtime_log
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas   1218560 Jun  6 17:33 result.tar.gz
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas      8656 Jun  6 17:33 runtime_log.err
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas       652 Jun  6 17:33 q9HMDm7Sre7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmXeKDmlHsdLo.diag
[2025-06-06 17:33:25] -rw-r--r--. 1 boincer umatlas     20784 Jun  6 17:33 stderr.txt
[2025-06-06 17:33:25] HITS file was successfully produced:
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas 195363054 Jun  6 17:32 shared/HITS.pool.root.1
[2025-06-06 17:33:25]  *** Contents of shared directory: ***
[2025-06-06 17:33:25] total 414076
[2025-06-06 17:33:25] -rw-r--r--. 2 boincer umatlas 226888026 Jun  6 15:03 ATLAS.root_0
[2025-06-06 17:33:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 15:03 start_atlas.sh
[2025-06-06 17:33:25] -rw-r--r--. 2 boincer umatlas    508887 Jun  6 15:03 input.tar.gz
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas 195363054 Jun  6 17:32 HITS.pool.root.1
[2025-06-06 17:33:25] -rw-------. 1 boincer umatlas   1218560 Jun  6 17:33 result.tar.gz
17:33:27 (3627115): run_atlas exited; CPU time 66605.345868
17:33:27 (3627115): called boinc_finish(0)

</stderr_txt>
]]>

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