Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-07 14:20:57 (5352): Detected: vboxwrapper 26206
2025-06-07 14:20:57 (5352): Detected: BOINC client v7.16.5
2025-06-07 14:20:58 (5352): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-06-07 14:20:58 (5352): Successfully copied 'init_data.xml' to the shared directory.
2025-06-07 14:20:59 (5352): Create VM. (boinc_ad05712248f3a708, slot#12)
2025-06-07 14:20:59 (5352): Setting Memory Size for VM. (4400MB)
2025-06-07 14:20:59 (5352): Setting CPU Count for VM. (4)
2025-06-07 14:21:00 (5352): Setting Chipset Options for VM.
2025-06-07 14:21:00 (5352): Setting Graphics Controller Options for VM.
2025-06-07 14:21:00 (5352): Setting Boot Options for VM.
2025-06-07 14:21:00 (5352): Setting Network Configuration for NAT.
2025-06-07 14:21:01 (5352): Enabling VM Network Access.
2025-06-07 14:21:01 (5352): Disabling USB Support for VM.
2025-06-07 14:21:01 (5352): Disabling COM Port Support for VM.
2025-06-07 14:21:01 (5352): Disabling LPT Port Support for VM.
2025-06-07 14:21:02 (5352): Disabling Audio Support for VM.
2025-06-07 14:21:02 (5352): Disabling Clipboard Support for VM.
2025-06-07 14:21:02 (5352): Disabling Drag and Drop Support for VM.
2025-06-07 14:21:02 (5352): Adding storage controller(s) to VM.
2025-06-07 14:21:03 (5352): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-07 14:21:03 (5352): Adding VirtualBox Guest Additions to VM.
2025-06-07 14:21:03 (5352): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-07 14:21:04 (5352): forwarding host port 56956 to guest port 80
2025-06-07 14:21:04 (5352): Enabling remote desktop for VM.
2025-06-07 14:21:04 (5352): Enabling shared directory for VM.
2025-06-07 14:21:05 (5352): Starting VM using VBoxManage interface. (boinc_ad05712248f3a708, slot#12)
2025-06-07 14:21:09 (5352): Successfully started VM. (PID = '13456')
2025-06-07 14:21:09 (5352): Reporting VM Process ID to BOINC.
2025-06-07 14:21:09 (5352): Guest Log: BIOS: VirtualBox 5.2.44
2025-06-07 14:21:09 (5352): Guest Log: CPUID EDX: 0x178bfbff
2025-06-07 14:21:09 (5352): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-07 14:21:09 (5352): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-07 14:21:09 (5352): Detected: Web Application Enabled (http://localhost:56956)
2025-06-07 14:21:09 (5352): Detected: Remote Desktop Enabled (localhost:56957)
2025-06-07 14:21:09 (5352): Preference change detected
2025-06-07 14:21:09 (5352): Setting CPU throttle for VM. (100%)
2025-06-07 14:21:10 (5352): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-07 14:21:11 (5352): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-07 14:21:11 (5352): Guest Log: BIOS: Booting from Hard Disk...
2025-06-07 14:21:14 (5352): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-07 14:21:14 (5352): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-07 14:21:14 (5352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-07 14:21:20 (5352): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-07 14:21:20 (5352): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-07 14:21:27 (5352): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-07 14:21:27 (5352): Guest Log: 00:00:00.000178 main     Log opened 2025-06-07T14:21:25.936113000Z
2025-06-07 14:21:27 (5352): Guest Log: 00:00:00.000321 main     OS Product: Linux
2025-06-07 14:21:27 (5352): Guest Log: 00:00:00.000366 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-07 14:21:27 (5352): Guest Log: 00:00:00.000394 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-07 14:21:27 (5352): Guest Log: 00:00:00.000424 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-07 14:21:27 (5352): Guest Log: 00:00:00.000425 main     Process ID: 1305
2025-06-07 14:21:27 (5352): Guest Log: 00:00:00.000425 main     Package type: LINUX_64BITS_GENERIC
2025-06-07 14:21:27 (5352): Guest Log: 00:00:00.001433 main     5.2.32 r132073 started. Verbose level = 0
2025-06-07 14:21:27 (5352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-07 14:21:27 (5352): Guest Log: [INFO] Mounting shared directory
2025-06-07 14:21:27 (5352): Guest Log: [INFO] Checking for init_data.xml
2025-06-07 14:21:37 (5352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-07 14:21:37 (5352): Guest Log: [INFO] Detected branch: prod
2025-06-07 14:21:37 (5352): Guest Log: 00:00:10.021484 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 470 384 000ns (GuestNow=1 749 295 297 470 000 000 ns GuestLast=1 749 306 085 940 384 000 ns fSetTimeLastLoop=true )
2025-06-07 14:21:38 (5352): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-07 14:21:38 (5352): Guest Log: Copying input files
2025-06-07 14:21:40 (5352): Guest Log: Copied input files into RunAtlas.
2025-06-07 14:21:40 (5352): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-07 14:21:40 (5352): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-07 14:21:40 (5352): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-07 14:21:40 (5352): Guest Log: Further information can be found at the LHC@home message board.
2025-06-07 14:21:49 (5352): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-07 14:22:09 (5352): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-07 14:22:09 (5352): Guest Log: 2.6.3.0 1582 0 32200 146898 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-07 14:22:10 (5352): Guest Log: copied the webapp to /var/www
2025-06-07 14:22:10 (5352): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-07 14:22:10 (5352): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-07 14:22:10 (5352): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-07 14:22:10 (5352): Guest Log:  *** Starting ATLAS job. (PandaID=6669512231 taskID=44871837) ***
2025-06-07 16:01:13 (5352): Status Report: Elapsed Time: '6000.000000'
2025-06-07 16:01:13 (5352): Status Report: CPU Time: '21419.546875'
2025-06-07 17:41:15 (5352): Status Report: Elapsed Time: '12000.000000'
2025-06-07 17:41:15 (5352): Status Report: CPU Time: '44234.531250'
2025-06-07 18:36:06 (5352): Guest Log:  *** Job finished ***
2025-06-07 18:36:06 (5352): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:35:57,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:35:58,496 | INFO     | [job] queue monitor thread has finished
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:35:58,744 | INFO     | [data] queue_monitor thread has finished
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:35:59,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724070115136)>', '<ExcThread(monitor, started 139723624388352)>']
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:35:59,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:35:59,877 | INFO     | [monitor] control thread has ended
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,583 | INFO     | all workflow threads have been joined
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,583 | INFO     | end of generic workflow (traces error code: 0)
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,583 | INFO     | traces error code: 0
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,688 [wrapper] ==== pilot stdout END ====
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,692 [wrapper] ==== wrapper stdout RESUME ====
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,696 [wrapper] pilotpid: 5895
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,701 [wrapper] Pilot exit status: 0
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,768 [wrapper] pandaids: 6669512231
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,798 [wrapper] cleanup supervisor_pilot 14279 5896
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,803 [wrapper] Test setup, not cleaning
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,808 [wrapper] apfmon messages muted
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,812 [wrapper] ==== wrapper stdout END ====
2025-06-07 18:36:06 (5352): Guest Log: 2025-06-07 15:36:04,816 [wrapper] ==== wrapper stderr END ====
2025-06-07 18:36:06 (5352): Guest Log:  *** Error codes and diagnostics ***
2025-06-07 18:36:06 (5352): Guest Log:     "exeErrorCode": 0,
2025-06-07 18:36:06 (5352): Guest Log:     "exeErrorDiag": "",
2025-06-07 18:36:06 (5352): Guest Log:     "pilotErrorCode": 0,
2025-06-07 18:36:06 (5352): Guest Log:     "pilotErrorDiag": "",
2025-06-07 18:36:06 (5352): Guest Log:  *** Listing of results directory ***
2025-06-07 18:36:06 (5352): Guest Log: total 198132
2025-06-07 18:36:06 (5352): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 29 07:54 pilot3.tar.gz
2025-06-07 18:36:06 (5352): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 29 07:57 queuedata.json
2025-06-07 18:36:06 (5352): Guest Log: -rwx------. 1 atlas atlas     37140 May 29 07:57 runpilot2-wrapper.sh
2025-06-07 18:36:06 (5352): Guest Log: -rwxr-xr-x. 1 atlas atlas      8859 Jun  7 11:21 init_data.xml
2025-06-07 18:36:06 (5352): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 Jun  7 11:21 input.tar.gz
2025-06-07 18:36:06 (5352): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  7 11:21 start_atlas.sh
2025-06-07 18:36:06 (5352): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  7 11:21 EVNT.44871834._003832.pool.root.1 -> /data/./ATLAS.root_0
2025-06-07 18:36:06 (5352): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  7 11:22 pandaJob.out
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas    985740 Jun  7 11:22 agis_schedconf.cvmfs.json
2025-06-07 18:36:06 (5352): Guest Log: drwx------. 4 atlas atlas      4096 Jun  7 11:22 pilot3
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas 195933737 Jun  7 15:35 HITS.44871837._097295.pool.root.1
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  7 15:35 memory_monitor_summary.json
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  7 15:35 agis_ddmendpoints.agis.ALL.json
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas    322643 Jun  7 15:35 log.44871837._097295.job.log.tgz.1
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas      7724 Jun  7 15:35 heartbeat.json
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas        95 Jun  7 15:35 pilot_heartbeat.json
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  7 15:36 pilotlog.txt
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas   1271612 Jun  7 15:36 log.44871837._097295.job.log.1
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas       357 Jun  7 15:36 output.list
2025-06-07 18:36:06 (5352): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  7 15:36 runtime_log
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas   1617920 Jun  7 15:36 result.tar.gz
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas       671 Jun  7 15:36 zr1LDmYJne7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml8dKDmVp0sIo.diag
2025-06-07 18:36:06 (5352): Guest Log: -rw-r--r--. 1 atlas atlas      8635 Jun  7 15:36 runtime_log.err
2025-06-07 18:36:06 (5352): Guest Log: Looking for outputfile HITS.44871837._097295.pool.root.1
2025-06-07 18:36:06 (5352): Guest Log: HITS file was successfully produced
2025-06-07 18:36:06 (5352): Guest Log: -rw-------. 1 atlas atlas 195933737 Jun  7 15:35 /home/atlas/RunAtlas/HITS.44871837._097295.pool.root.1
2025-06-07 18:36:07 (5352): Guest Log: Successfully finished the ATLAS job!
2025-06-07 18:36:07 (5352): Guest Log: Copying the results back to the shared directory!
2025-06-07 18:36:07 (5352): Guest Log:  *** Contents of shared directory: ***
2025-06-07 18:36:07 (5352): Guest Log: total 410988
2025-06-07 18:36:07 (5352): Guest Log: -rwxrwxrwx. 1 root root 222754256 Jun  7 11:20 ATLAS.root_0
2025-06-07 18:36:07 (5352): Guest Log: -rwxrwxrwx. 1 root root 195933737 Jun  7 15:36 HITS.pool.root.1
2025-06-07 18:36:07 (5352): Guest Log: -rwxrwxrwx. 1 root root      8859 Jun  7 11:20 init_data.xml
2025-06-07 18:36:07 (5352): Guest Log: -rwxrwxrwx. 1 root root    508877 Jun  6 17:34 input.tar.gz
2025-06-07 18:36:07 (5352): Guest Log: -rwxrwxrwx. 1 root root   1617920 Jun  7 15:36 result.tar.gz
2025-06-07 18:36:07 (5352): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  6 17:34 start_atlas.sh
2025-06-07 18:36:07 (5352): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-07 18:36:07 (5352): VM Completion File Detected.
2025-06-07 18:36:07 (5352): Powering off VM.
2025-06-07 18:36:07 (5352): Successfully stopped VM.
2025-06-07 18:36:07 (5352): Deregistering VM. (boinc_ad05712248f3a708, slot#12)
2025-06-07 18:36:07 (5352): Removing network bandwidth throttle group from VM.
2025-06-07 18:36:08 (5352): Removing VM from VirtualBox.
18:36:13 (5352): called boinc_finish(0)

</stderr_txt>
]]>

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