Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:20:32 (249558): wrapper (7.7.26015): starting
13:20:32 (249558): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 13:20:32] Arguments: --nthreads 12
[2025-06-06 13:20:32] Threads: 12
[2025-06-06 13:20:32] Checking for CVMFS
[2025-06-06 13:20:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 13:20:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 13:20:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 13:20:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 13:20:33] 2.12.6.0 32194 3988 166964 146869 1 66 27758182 32935937 13195 16776704 0 15769596 99.665 12436037 35303 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 13:20:33] CVMFS is ok
[2025-06-06 13:20:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 13:20:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 13:20:33] Further information can be found at the LHC@home message board.
[2025-06-06 13:20:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 13:20:33] Checking for apptainer binary...
[2025-06-06 13:20:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 13:20:33] Running /usr/bin/apptainer --version
[2025-06-06 13:20:33] apptainer version 1.4.1-1.el9
[2025-06-06 13:20:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 13:20:33] c6-1-24-4.aglt2.org
[2025-06-06 13:20:33] apptainer works
[2025-06-06 13:20:33] Set ATHENA_PROC_NUMBER=12
[2025-06-06 13:20:33] Set ATHENA_CORE_NUMBER=12
[2025-06-06 13:20:33] Starting ATLAS job with PandaID=6682180079
[2025-06-06 13:20:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 14:13:20]  *** The last 200 lines of the pilot log: ***
[2025-06-06 14:13:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 14:13:20]  is_altstaged=None
[2025-06-06 14:13:20]  is_tar=False
[2025-06-06 14:13:20]  lfn=log.45006595._057154.job.log.tgz.1
[2025-06-06 14:13:20]  mtime=0
[2025-06-06 14:13:20]  protocol_id=None
[2025-06-06 14:13:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 14:13:20]  replicas=None
[2025-06-06 14:13:20]  scope=mc23_13p6TeV
[2025-06-06 14:13:20]  status=None
[2025-06-06 14:13:20]  status_code=0
[2025-06-06 14:13:20]  storage_token=
[2025-06-06 14:13:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6682180079/log.45006595._057154.job.log.tgz.1
[2025-06-06 14:13:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/d5/log.45006595._057154.job.log.tgz.1
[2025-06-06 14:13:20]  workdir=None
[2025-06-06 14:13:20] ]
[2025-06-06 14:13:20] 2025-06-06 18:12:42,936 | INFO     | transferring file log.45006595._057154.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6682180079/log.45006595._057154.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 14:13:20] 2025-06-06 18:12:42,936 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6682180079/log.45006595._057154.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._057154.job
[2025-06-06 14:13:20] 2025-06-06 18:12:42,954 | INFO     | adding to output.list: log.45006595._057154.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/d5/log.45006595._057154.job.log.tg
[2025-06-06 14:13:20] 2025-06-06 18:12:42,955 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 14:13:20] 2025-06-06 18:12:42,955 | INFO     | summary of transferred files:
[2025-06-06 14:13:20] 2025-06-06 18:12:42,955 | INFO     |  -- lfn=log.45006595._057154.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 14:13:20] 2025-06-06 18:12:42,955 | INFO     | stage-out finished correctly
[2025-06-06 14:13:20] 2025-06-06 18:12:43,562 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 14:13:20] 2025-06-06 18:12:44,334 | INFO     | job 6682180079 has state=finished
[2025-06-06 14:13:20] 2025-06-06 18:12:44,334 | INFO     | preparing for final server update for job 6682180079 in state='finished'
[2025-06-06 14:13:20] 2025-06-06 18:12:44,335 | INFO     | this job has now completed (state=finished)
[2025-06-06 14:13:20] 2025-06-06 18:12:44,335 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 14:13:20] 2025-06-06 18:12:44,335 | INFO     | log transfer has been attempted: DONE
[2025-06-06 14:13:20] 2025-06-06 18:12:44,335 | INFO     | job 6682180079 has finished - writing final server update
[2025-06-06 14:13:20] 2025-06-06 18:12:44,336 | INFO     | total number of processed events: 400 (read)
[2025-06-06 14:13:20] 2025-06-06 18:12:44,336 | INFO     | executing command: lscpu
[2025-06-06 14:13:20] 2025-06-06 18:12:44,387 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 14:13:20] 2025-06-06 18:12:46,397 | WARNING  | process 260372 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 14:13:20] 2025-06-06 18:12:46,397 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6682180079/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 14:13:20] 2025-06-06 18:12:46,627 | INFO     | number of running child processes to parent process 260372: 1
[2025-06-06 14:13:20] 2025-06-06 18:12:46,627 | INFO     | maximum number of monitored processes: 6
[2025-06-06 14:13:20] 2025-06-06 18:12:48,103 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 14:13:20] 2025-06-06 18:12:48,119 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2866.9782678571432
[2025-06-06 14:13:20] 2025-06-06 18:12:48,142 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6682180079/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 14:13:20] 2025-06-06 18:12:48,142 | INFO     | extracted standard info from prmon json
[2025-06-06 14:13:20] 2025-06-06 18:12:48,143 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 14:13:20] 2025-06-06 18:12:48,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 14:13:20] 2025-06-06 18:12:48,143 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 14:13:20] 2025-06-06 18:12:48,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 14:13:20] 2025-06-06 18:12:48,145 | INFO     | fitting pss+swap vs Time
[2025-06-06 14:13:20] 2025-06-06 18:12:48,145 | INFO     | sum of square deviations: 26400495.0
[2025-06-06 14:13:20] 2025-06-06 18:12:48,145 | INFO     | sum of deviations: 556382891.0
[2025-06-06 14:13:20] 2025-06-06 18:12:48,145 | INFO     | mean x: 1749232085.5
[2025-06-06 14:13:20] 2025-06-06 18:12:48,145 | INFO     | mean y: 2772217.6363636362
[2025-06-06 14:13:20] 2025-06-06 18:12:48,145 | INFO     | -- intersect: -36861794327.818535
[2025-06-06 14:13:20] 2025-06-06 18:12:48,146 | INFO     | intersect: -36861794327.818535
[2025-06-06 14:13:20] 2025-06-06 18:12:48,146 | INFO     | chi2: 0.00960127033609829
[2025-06-06 14:13:20] 2025-06-06 18:12:48,146 | INFO     | -- intersect: -36861794327.818535
[2025-06-06 14:13:20] 2025-06-06 18:12:48,146 | INFO     | current memory leak: 21.07 B/s (using 44 data points, chi2=0.01)
[2025-06-06 14:13:20] 2025-06-06 18:12:48,146 | INFO     | could have reported an average CPU frequency of 2878 MHz (5 samples)
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | ..............................
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | . Timing measurements:
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | . get job = 0 s
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | . initial setup = 3 s
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | . payload setup = 6 s
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | . stage-in = 0 s
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | . payload execution = 3092 s
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | . stage-out = 0 s
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | . log creation = 0 s
[2025-06-06 14:13:20] 2025-06-06 18:12:48,147 | INFO     | ..............................
[2025-06-06 14:13:20] 2025-06-06 18:12:48,241 | INFO     | 
[2025-06-06 14:13:20] 2025-06-06 18:12:48,241 | INFO     | job summary report
[2025-06-06 14:13:20] 2025-06-06 18:12:48,241 | INFO     | --------------------------------------------------
[2025-06-06 14:13:20] 2025-06-06 18:12:48,241 | INFO     | PanDA job id: 6682180079
[2025-06-06 14:13:20] 2025-06-06 18:12:48,241 | INFO     | task id: 45006595
[2025-06-06 14:13:20] 2025-06-06 18:12:48,241 | INFO     | errors: (none)
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | pilot state: finished 
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | transexitcode: 0
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | exeerrorcode: 0
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | exeerrordiag: 
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | exitcode: 0
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | exitmsg: OK
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | cpuconsumptiontime: 32143 s
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | nevents: 400
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | neventsw: 0
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | pid: 260372
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | pgrp: 260372
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | corecount: 12
[2025-06-06 14:13:20] 2025-06-06 18:12:48,242 | INFO     | event service: False
[2025-06-06 14:13:20] 2025-06-06 18:12:48,243 | INFO     | sizes: {0: 2397632, 4: 2397894, 11: 2397922, 3102: 2423382, 3104: 2432323, 3105: 2432379, 3109: 2432733}
[2025-06-06 14:13:20] 2025-06-06 18:12:48,243 | INFO     | --------------------------------------------------
[2025-06-06 14:13:20] 2025-06-06 18:12:48,243 | INFO     | 
[2025-06-06 14:13:20] 2025-06-06 18:12:48,243 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 14:13:20] 2025-06-06 18:12:48,261 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 14:13:20] 2025-06-06 18:12:48,263 | INFO     | job 6682180079 has completed (purged errors)
[2025-06-06 14:13:20] 2025-06-06 18:12:48,264 | INFO     | overall cleanup function is called
[2025-06-06 14:13:20] 2025-06-06 18:12:49,271 | INFO     | --- collectZombieJob: --- 10, [260372]
[2025-06-06 14:13:20] 2025-06-06 18:12:49,271 | INFO     | zombie collector waiting for pid 260372
[2025-06-06 14:13:20] 2025-06-06 18:12:49,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 14:13:20] 2025-06-06 18:12:49,272 | INFO     | collected zombie processes
[2025-06-06 14:13:20] 2025-06-06 18:12:49,272 | INFO     | will attempt to kill all subprocesses of pid=260372
[2025-06-06 14:13:20] 2025-06-06 18:12:49,478 | INFO     | process IDs to be killed: [260372] (in reverse order)
[2025-06-06 14:13:20] 2025-06-06 18:12:49,563 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 14:13:20] 2025-06-06 18:12:49,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 14:13:20] 2025-06-06 18:12:49,573 | INFO     | did not find any defunct processes belonging to 260372
[2025-06-06 14:13:20] 2025-06-06 18:12:49,581 | INFO     | did not find any defunct processes belonging to 260372
[2025-06-06 14:13:20] 2025-06-06 18:12:49,582 | INFO     | ready for new job
[2025-06-06 14:13:20] 2025-06-06 18:12:49,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 14:13:20] 2025-06-06 18:12:49,584 | INFO     | ***************************************
[2025-06-06 14:13:20] 2025-06-06 18:12:49,584 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 14:13:20] 2025-06-06 18:12:49,584 | INFO     | ***************************************
[2025-06-06 14:13:20] 2025-06-06 18:12:49,584 | INFO     | 
[2025-06-06 14:13:20] 2025-06-06 18:12:49,599 | INFO     | architecture information:
[2025-06-06 14:13:20] 2025-06-06 18:12:49,600 | INFO     | executing command: cat /etc/os-release
[2025-06-06 14:13:20] 2025-06-06 18:12:49,614 | INFO     | cat /etc/os-release:
[2025-06-06 14:13:20] NAME="CentOS Linux"
[2025-06-06 14:13:20] VERSION="7 (Core)"
[2025-06-06 14:13:20] ID="centos"
[2025-06-06 14:13:20] ID_LIKE="rhel fedora"
[2025-06-06 14:13:20] VERSION_ID="7"
[2025-06-06 14:13:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 14:13:20] ANSI_COLOR="0;31"
[2025-06-06 14:13:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 14:13:20] HOME_URL="https://www.centos.org/"
[2025-06-06 14:13:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 14:13:20] 
[2025-06-06 14:13:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 14:13:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 14:13:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 14:13:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 14:13:20] 
[2025-06-06 14:13:20] 2025-06-06 18:12:49,614 | INFO     | ***************************************
[2025-06-06 14:13:20] 2025-06-06 18:12:50,117 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 14:13:20] 2025-06-06 18:12:50,133 | INFO     | sufficient remaining disk space (76507250688 B)
[2025-06-06 14:13:20] 2025-06-06 18:12:50,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 14:13:20] 2025-06-06 18:12:50,134 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 14:13:20] 2025-06-06 18:12:50,134 | INFO     | update_server=False
[2025-06-06 14:13:20] 2025-06-06 18:12:50,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 14:13:20] 2025-06-06 18:12:50,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:13:20] 2025-06-06 18:12:50,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 14:13:20] 2025-06-06 18:12:50,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:13:20] 2025-06-06 18:12:50,135 | INFO     | aborting loop
[2025-06-06 14:13:20] 2025-06-06 18:12:50,544 | INFO     | all data control threads have been joined
[2025-06-06 14:13:20] 2025-06-06 18:12:50,915 | INFO     | all job control threads have been joined
[2025-06-06 14:13:20] 2025-06-06 18:12:51,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 14:13:20] 2025-06-06 18:12:51,136 | INFO     | [job] queue monitor thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:51,140 | INFO     | [job] retrieve thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:51,141 | INFO     | [job] job monitor thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:51,504 | INFO     | all payload control threads have been joined
[2025-06-06 14:13:20] 2025-06-06 18:12:51,548 | INFO     | [data] control thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:51,576 | INFO     | [payload] validate_post thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:51,587 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:51,681 | INFO     | [job] validate thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:51,910 | INFO     | [data] copytool_in thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:51,921 | INFO     | [job] control thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:52,079 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:52,177 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:52,184 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:52,509 | INFO     | [payload] control thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:52,730 | INFO     | [payload] failed_post thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:53,064 | INFO     | [data] copytool_out thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:54,137 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 14:13:20] 2025-06-06 18:12:54,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232236615488)>', '<ExcThread(monitor, started 140231739168512)>']
[2025-06-06 14:13:20] 2025-06-06 18:12:59,626 | INFO     | all workflow threads have been joined
[2025-06-06 14:13:20] 2025-06-06 18:12:59,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 14:13:20] 2025-06-06 18:12:59,627 | INFO     | traces error code: 0
[2025-06-06 14:13:20] 2025-06-06 18:12:59,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 14:13:20] 2025-06-06 18:13:20,323 | INFO     | PID=253233 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-06 14:13:20] 2025-06-06 18:13:20,324 | INFO     | .. there are 15 such processes running
[2025-06-06 14:13:20] 2025-06-06 18:13:20,324 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 14:13:20] 2025-06-06 18:13:20,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 14:13:20] 2025-06-06 18:13:20,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 14:13:20] 2025-06-06 18:13:20,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 14:13:20] 2025-06-06 18:13:20,324 | INFO     | [monitor] control thread has ended
[2025-06-06 14:13:20] 2025-06-06 18:13:20,493 [wrapper] ==== pilot stdout END ====
[2025-06-06 14:13:20] 2025-06-06 18:13:20,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 14:13:20] 2025-06-06 18:13:20,499 [wrapper] pilotpid: 253233
[2025-06-06 14:13:20] 2025-06-06 18:13:20,501 [wrapper] Pilot exit status: 0
[2025-06-06 14:13:20] 2025-06-06 18:13:20,510 [wrapper] pandaids: 6682180079
[2025-06-06 14:13:20] 2025-06-06 18:13:20,568 [wrapper] cleanup supervisor_pilot  368054 253234
[2025-06-06 14:13:20] 2025-06-06 18:13:20,571 [wrapper] Test setup, not cleaning
[2025-06-06 14:13:20] 2025-06-06 18:13:20,574 [wrapper] apfmon messages muted
[2025-06-06 14:13:20] 2025-06-06 18:13:20,576 [wrapper] ==== wrapper stdout END ====
[2025-06-06 14:13:20] 2025-06-06 18:13:20,580 [wrapper] ==== wrapper stderr END ====
[2025-06-06 14:13:20]  *** Error codes and diagnostics ***
[2025-06-06 14:13:20]     "exeErrorCode": 0,
[2025-06-06 14:13:20]     "exeErrorDiag": "",
[2025-06-06 14:13:20]     "pilotErrorCode": 0,
[2025-06-06 14:13:20]     "pilotErrorDiag": "",
[2025-06-06 14:13:20]  *** Listing of results directory ***
[2025-06-06 14:13:20] total 392544
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas    529402 Jun  6 09:11 pilot3.tar.gz
[2025-06-06 14:13:20] -rwx------. 1 boincer umatlas     37140 Jun  6 09:34 runpilot2-wrapper.sh
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas      5112 Jun  6 09:34 queuedata.json
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas       100 Jun  6 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 14:13:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 13:20 run_atlas
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas       105 Jun  6 13:20 job.xml
[2025-06-06 14:13:20] -rw-r--r--. 2 boincer umatlas 217866947 Jun  6 13:20 EVNT.45006593._002099.pool.root.1
[2025-06-06 14:13:20] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 13:20 start_atlas.sh
[2025-06-06 14:13:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 13:20 shared
[2025-06-06 14:13:20] -rw-r--r--. 2 boincer umatlas    541919 Jun  6 13:20 input.tar.gz
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas         0 Jun  6 13:20 boinc_lockfile
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas      2524 Jun  6 13:20 pandaJob.out
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas    985748 Jun  6 13:20 agis_schedconf.cvmfs.json
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas   1598969 Jun  6 13:20 agis_ddmendpoints.agis.ALL.json
[2025-06-06 14:13:20] drwx------. 4 boincer umatlas      4096 Jun  6 13:20 pilot3
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas       530 Jun  6 14:12 boinc_task_state.xml
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas 178839650 Jun  6 14:12 HITS.45006595._057154.pool.root.1
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas        95 Jun  6 14:12 pilot_heartbeat.json
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas      1038 Jun  6 14:12 memory_monitor_summary.json
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas    353267 Jun  6 14:12 log.45006595._057154.job.log.tgz.1
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas      7753 Jun  6 14:12 heartbeat.json
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas      6839 Jun  6 14:13 init_data.xml
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 14:13 boinc_mmap_file
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas        27 Jun  6 14:13 wrapper_checkpoint.txt
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas       822 Jun  6 14:13 pilotlog.txt
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas    328426 Jun  6 14:13 log.45006595._057154.job.log.1
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas       357 Jun  6 14:13 output.list
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas       620 Jun  6 14:13 runtime_log
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas    696320 Jun  6 14:13 result.tar.gz
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas      8667 Jun  6 14:13 runtime_log.err
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas       653 Jun  6 14:13 8KhNDmHOmh7n9Rq4apOajLDm4fhM0noT9bVof3QYDm15aKDmdemuUo.diag
[2025-06-06 14:13:20] -rw-r--r--. 1 boincer umatlas     21454 Jun  6 14:13 stderr.txt
[2025-06-06 14:13:20] HITS file was successfully produced:
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas 178839650 Jun  6 14:12 shared/HITS.pool.root.1
[2025-06-06 14:13:20]  *** Contents of shared directory: ***
[2025-06-06 14:13:20] total 388652
[2025-06-06 14:13:20] -rw-r--r--. 2 boincer umatlas 217866947 Jun  6 13:20 ATLAS.root_0
[2025-06-06 14:13:20] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 13:20 start_atlas.sh
[2025-06-06 14:13:20] -rw-r--r--. 2 boincer umatlas    541919 Jun  6 13:20 input.tar.gz
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas 178839650 Jun  6 14:12 HITS.pool.root.1
[2025-06-06 14:13:20] -rw-------. 1 boincer umatlas    696320 Jun  6 14:13 result.tar.gz
14:13:21 (249558): run_atlas exited; CPU time 32149.537360
14:13:21 (249558): called boinc_finish(0)

</stderr_txt>
]]>

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