Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:10:21 (650131): wrapper (7.7.26015): starting
13:10:21 (650131): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 13:10:21] Arguments: --nthreads 12
[2025-06-06 13:10:21] Threads: 12
[2025-06-06 13:10:21] Checking for CVMFS
[2025-06-06 13:10:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 13:10:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 13:10:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 13:10:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 13:10:21] 2.12.6.0 5825 4501 175920 146868 3 347 38449769 40960000 8493 16776704 0 16489463 99.943 2812723 39522 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 13:10:21] CVMFS is ok
[2025-06-06 13:10:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 13:10:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 13:10:21] Further information can be found at the LHC@home message board.
[2025-06-06 13:10:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 13:10:21] Checking for apptainer binary...
[2025-06-06 13:10:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 13:10:21] Running /usr/bin/apptainer --version
[2025-06-06 13:10:21] apptainer version 1.4.1-1.el9
[2025-06-06 13:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 13:10:21] c6-8-12-4.aglt2.org
[2025-06-06 13:10:21] apptainer works
[2025-06-06 13:10:21] Set ATHENA_PROC_NUMBER=12
[2025-06-06 13:10:21] Set ATHENA_CORE_NUMBER=12
[2025-06-06 13:10:21] Starting ATLAS job with PandaID=6670715312
[2025-06-06 13:10:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 14:37:04]  *** The last 200 lines of the pilot log: ***
[2025-06-06 14:37:04]  filesize=365735
[2025-06-06 14:37:04]  filetype=log
[2025-06-06 14:37:04]  guid=8f633f92-17f2-4305-8745-d69a3edd4881
[2025-06-06 14:37:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 14:37:04]  is_altstaged=None
[2025-06-06 14:37:04]  is_tar=False
[2025-06-06 14:37:04]  lfn=log.44871837._098834.job.log.tgz.1
[2025-06-06 14:37:04]  mtime=0
[2025-06-06 14:37:04]  protocol_id=None
[2025-06-06 14:37:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 14:37:04]  replicas=None
[2025-06-06 14:37:04]  scope=mc23_13p6TeV
[2025-06-06 14:37:04]  status=None
[2025-06-06 14:37:04]  status_code=0
[2025-06-06 14:37:04]  storage_token=
[2025-06-06 14:37:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6670715312/log.44871837._098834.job.log.tgz.1
[2025-06-06 14:37:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/bc/log.44871837._098834.job.log.tgz.1
[2025-06-06 14:37:04]  workdir=None
[2025-06-06 14:37:04] ]
[2025-06-06 14:37:04] 2025-06-06 18:36:43,321 | INFO     | transferring file log.44871837._098834.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6670715312/log.44871837._098834.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 14:37:04] 2025-06-06 18:36:43,321 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6670715312/log.44871837._098834.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._098834.job
[2025-06-06 14:37:04] 2025-06-06 18:36:43,340 | INFO     | adding to output.list: log.44871837._098834.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/bc/log.44871837._098834.job.log.tg
[2025-06-06 14:37:04] 2025-06-06 18:36:43,341 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 14:37:04] 2025-06-06 18:36:43,341 | INFO     | summary of transferred files:
[2025-06-06 14:37:04] 2025-06-06 18:36:43,341 | INFO     |  -- lfn=log.44871837._098834.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 14:37:04] 2025-06-06 18:36:43,341 | INFO     | stage-out finished correctly
[2025-06-06 14:37:04] 2025-06-06 18:36:43,431 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 14:37:04] 2025-06-06 18:36:45,302 | INFO     | job 6670715312 has state=finished
[2025-06-06 14:37:04] 2025-06-06 18:36:45,303 | INFO     | preparing for final server update for job 6670715312 in state='finished'
[2025-06-06 14:37:04] 2025-06-06 18:36:45,303 | INFO     | this job has now completed (state=finished)
[2025-06-06 14:37:04] 2025-06-06 18:36:45,303 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 14:37:04] 2025-06-06 18:36:45,303 | INFO     | log transfer has been attempted: DONE
[2025-06-06 14:37:04] 2025-06-06 18:36:45,303 | INFO     | job 6670715312 has finished - writing final server update
[2025-06-06 14:37:04] 2025-06-06 18:36:45,304 | INFO     | total number of processed events: 400 (read)
[2025-06-06 14:37:04] 2025-06-06 18:36:45,319 | INFO     | executing command: lscpu
[2025-06-06 14:37:04] 2025-06-06 18:36:45,382 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 14:37:04] 2025-06-06 18:36:47,149 | WARNING  | process 661825 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 14:37:04] 2025-06-06 18:36:47,150 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6670715312/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 14:37:04] 2025-06-06 18:36:47,338 | INFO     | number of running child processes to parent process 661825: 1
[2025-06-06 14:37:04] 2025-06-06 18:36:47,338 | INFO     | maximum number of monitored processes: 6
[2025-06-06 14:37:04] 2025-06-06 18:36:49,098 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 14:37:04] 2025-06-06 18:36:49,098 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6670715312/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 14:37:04] 2025-06-06 18:36:49,099 | INFO     | extracted standard info from prmon json
[2025-06-06 14:37:04] 2025-06-06 18:36:49,099 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 14:37:04] 2025-06-06 18:36:49,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 14:37:04] 2025-06-06 18:36:49,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 14:37:04] 2025-06-06 18:36:49,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 14:37:04] 2025-06-06 18:36:49,101 | INFO     | fitting pss+swap vs Time
[2025-06-06 14:37:04] 2025-06-06 18:36:49,102 | INFO     | sum of square deviations: 147125450.4615387
[2025-06-06 14:37:04] 2025-06-06 18:36:49,102 | INFO     | sum of deviations: -583775499.3846153
[2025-06-06 14:37:04] 2025-06-06 18:36:49,102 | INFO     | mean x: 1749232509.6153846
[2025-06-06 14:37:04] 2025-06-06 18:36:49,102 | INFO     | mean y: 2400704.3205128205
[2025-06-06 14:37:04] 2025-06-06 18:36:49,102 | INFO     | -- intersect: 6943137868.673153
[2025-06-06 14:37:04] 2025-06-06 18:36:49,102 | INFO     | intersect: 6943137868.673153
[2025-06-06 14:37:04] 2025-06-06 18:36:49,103 | INFO     | chi2: 0.04162341450845363
[2025-06-06 14:37:04] 2025-06-06 18:36:49,103 | INFO     | -- intersect: 6943137868.673153
[2025-06-06 14:37:04] 2025-06-06 18:36:49,103 | INFO     | current memory leak: -3.97 B/s (using 78 data points, chi2=0.04)
[2025-06-06 14:37:04] 2025-06-06 18:36:49,103 | INFO     | ..............................
[2025-06-06 14:37:04] 2025-06-06 18:36:49,103 | INFO     | . Timing measurements:
[2025-06-06 14:37:04] 2025-06-06 18:36:49,103 | INFO     | . get job = 0 s
[2025-06-06 14:37:04] 2025-06-06 18:36:49,104 | INFO     | . initial setup = 4 s
[2025-06-06 14:37:04] 2025-06-06 18:36:49,104 | INFO     | . payload setup = 5 s
[2025-06-06 14:37:04] 2025-06-06 18:36:49,104 | INFO     | . stage-in = 0 s
[2025-06-06 14:37:04] 2025-06-06 18:36:49,104 | INFO     | . payload execution = 5146 s
[2025-06-06 14:37:04] 2025-06-06 18:36:49,104 | INFO     | . stage-out = 0 s
[2025-06-06 14:37:04] 2025-06-06 18:36:49,104 | INFO     | . log creation = 0 s
[2025-06-06 14:37:04] 2025-06-06 18:36:49,104 | INFO     | ..............................
[2025-06-06 14:37:04] 2025-06-06 18:36:49,247 | INFO     | 
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | job summary report
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | --------------------------------------------------
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | PanDA job id: 6670715312
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | task id: 44871837
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | errors: (none)
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | pilot state: finished 
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | transexitcode: 0
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | exeerrorcode: 0
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | exeerrordiag: 
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | exitcode: 0
[2025-06-06 14:37:04] 2025-06-06 18:36:49,248 | INFO     | exitmsg: OK
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | cpuconsumptiontime: 47294 s
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | nevents: 400
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | neventsw: 0
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | pid: 661825
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | pgrp: 661825
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | corecount: 12
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | event service: False
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 5155: 2424019, 5156: 2433016, 5162: 2433130}
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | --------------------------------------------------
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | 
[2025-06-06 14:37:04] 2025-06-06 18:36:49,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | job 6670715312 has completed (purged errors)
[2025-06-06 14:37:04] 2025-06-06 18:36:49,270 | INFO     | overall cleanup function is called
[2025-06-06 14:37:04] 2025-06-06 18:36:50,278 | INFO     | --- collectZombieJob: --- 10, [661825]
[2025-06-06 14:37:04] 2025-06-06 18:36:50,278 | INFO     | zombie collector waiting for pid 661825
[2025-06-06 14:37:04] 2025-06-06 18:36:50,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 14:37:04] 2025-06-06 18:36:50,279 | INFO     | collected zombie processes
[2025-06-06 14:37:04] 2025-06-06 18:36:50,279 | INFO     | will attempt to kill all subprocesses of pid=661825
[2025-06-06 14:37:04] 2025-06-06 18:36:50,479 | INFO     | process IDs to be killed: [661825] (in reverse order)
[2025-06-06 14:37:04] 2025-06-06 18:36:50,558 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 14:37:04] 2025-06-06 18:36:50,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 14:37:04] 2025-06-06 18:36:50,567 | INFO     | did not find any defunct processes belonging to 661825
[2025-06-06 14:37:04] 2025-06-06 18:36:50,577 | INFO     | did not find any defunct processes belonging to 661825
[2025-06-06 14:37:04] 2025-06-06 18:36:50,577 | INFO     | ready for new job
[2025-06-06 14:37:04] 2025-06-06 18:36:50,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 14:37:04] 2025-06-06 18:36:50,579 | INFO     | **************************************
[2025-06-06 14:37:04] 2025-06-06 18:36:50,580 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 14:37:04] 2025-06-06 18:36:50,580 | INFO     | **************************************
[2025-06-06 14:37:04] 2025-06-06 18:36:50,580 | INFO     | 
[2025-06-06 14:37:04] 2025-06-06 18:36:50,595 | INFO     | architecture information:
[2025-06-06 14:37:04] 2025-06-06 18:36:50,596 | INFO     | executing command: cat /etc/os-release
[2025-06-06 14:37:04] 2025-06-06 18:36:50,610 | INFO     | cat /etc/os-release:
[2025-06-06 14:37:04] NAME="CentOS Linux"
[2025-06-06 14:37:04] VERSION="7 (Core)"
[2025-06-06 14:37:04] ID="centos"
[2025-06-06 14:37:04] ID_LIKE="rhel fedora"
[2025-06-06 14:37:04] VERSION_ID="7"
[2025-06-06 14:37:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 14:37:04] ANSI_COLOR="0;31"
[2025-06-06 14:37:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 14:37:04] HOME_URL="https://www.centos.org/"
[2025-06-06 14:37:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 14:37:04] 
[2025-06-06 14:37:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 14:37:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 14:37:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 14:37:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 14:37:04] 
[2025-06-06 14:37:04] 2025-06-06 18:36:50,611 | INFO     | **************************************
[2025-06-06 14:37:04] 2025-06-06 18:36:51,114 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 14:37:04] 2025-06-06 18:36:51,129 | INFO     | sufficient remaining disk space (56255053824 B)
[2025-06-06 14:37:04] 2025-06-06 18:36:51,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 14:37:04] 2025-06-06 18:36:51,130 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 14:37:04] 2025-06-06 18:36:51,130 | INFO     | update_server=False
[2025-06-06 14:37:04] 2025-06-06 18:36:51,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 14:37:04] 2025-06-06 18:36:51,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:37:04] 2025-06-06 18:36:51,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:37:04] 2025-06-06 18:36:51,131 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 14:37:04] 2025-06-06 18:36:51,132 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 14:37:04] 2025-06-06 18:36:51,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 14:37:04] 2025-06-06 18:36:51,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 14:37:04] 2025-06-06 18:36:51,131 | INFO     | aborting loop
[2025-06-06 14:37:04] 2025-06-06 18:36:51,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 14:37:04] 2025-06-06 18:36:51,829 | INFO     | all job control threads have been joined
[2025-06-06 14:37:04] 2025-06-06 18:36:51,904 | INFO     | all payload control threads have been joined
[2025-06-06 14:37:04] 2025-06-06 18:36:51,996 | INFO     | all data control threads have been joined
[2025-06-06 14:37:04] 2025-06-06 18:36:52,135 | INFO     | [job] retrieve thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:52,137 | INFO     | [job] queue monitor thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:52,137 | INFO     | [job] job monitor thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:52,439 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:52,654 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:52,768 | INFO     | [job] validate thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:52,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:52,834 | INFO     | [job] control thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:52,910 | INFO     | [payload] control thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:53,001 | INFO     | [data] control thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:53,122 | INFO     | [payload] validate_post thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:53,321 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:53,424 | INFO     | [payload] failed_post thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:53,448 | INFO     | [data] copytool_out thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:53,481 | INFO     | [data] copytool_in thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:54,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 14:37:04] 2025-06-06 18:36:58,044 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 14:37:04] 2025-06-06 18:36:59,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653636843328)>', '<ExcThread(monitor, started 139652874893056)>']
[2025-06-06 14:37:04] 2025-06-06 18:37:00,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 14:37:04] 2025-06-06 18:37:00,181 | INFO     | [monitor] control thread has ended
[2025-06-06 14:37:04] 2025-06-06 18:37:04,521 | INFO     | all workflow threads have been joined
[2025-06-06 14:37:04] 2025-06-06 18:37:04,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 14:37:04] 2025-06-06 18:37:04,522 | INFO     | traces error code: 0
[2025-06-06 14:37:04] 2025-06-06 18:37:04,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 14:37:04] 2025-06-06 18:37:04,687 [wrapper] ==== pilot stdout END ====
[2025-06-06 14:37:04] 2025-06-06 18:37:04,691 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 14:37:04] 2025-06-06 18:37:04,694 [wrapper] pilotpid: 653947
[2025-06-06 14:37:04] 2025-06-06 18:37:04,697 [wrapper] Pilot exit status: 0
[2025-06-06 14:37:04] 2025-06-06 18:37:04,707 [wrapper] pandaids: 6670715312
[2025-06-06 14:37:04] 2025-06-06 18:37:04,761 [wrapper] cleanup supervisor_pilot  782281 653948
[2025-06-06 14:37:04] 2025-06-06 18:37:04,765 [wrapper] Test setup, not cleaning
[2025-06-06 14:37:04] 2025-06-06 18:37:04,768 [wrapper] apfmon messages muted
[2025-06-06 14:37:04] 2025-06-06 18:37:04,771 [wrapper] ==== wrapper stdout END ====
[2025-06-06 14:37:04] 2025-06-06 18:37:04,775 [wrapper] ==== wrapper stderr END ====
[2025-06-06 14:37:04]  *** Error codes and diagnostics ***
[2025-06-06 14:37:04]     "exeErrorCode": 0,
[2025-06-06 14:37:04]     "exeErrorDiag": "",
[2025-06-06 14:37:04]     "pilotErrorCode": 0,
[2025-06-06 14:37:04]     "pilotErrorDiag": "",
[2025-06-06 14:37:04]  *** Listing of results directory ***
[2025-06-06 14:37:04] total 425800
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas    495897 May 29 06:07 pilot3.tar.gz
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas      5111 May 29 06:21 queuedata.json
[2025-06-06 14:37:04] -rwx------. 1 boincer umatlas     37140 May 29 06:23 runpilot2-wrapper.sh
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas       100 Jun  6 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 14:37:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 13:10 run_atlas
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas       105 Jun  6 13:10 job.xml
[2025-06-06 14:37:04] -rw-r--r--. 2 boincer umatlas 226980927 Jun  6 13:10 EVNT.44871834._002806.pool.root.1
[2025-06-06 14:37:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 13:10 start_atlas.sh
[2025-06-06 14:37:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 13:10 shared
[2025-06-06 14:37:04] -rw-r--r--. 2 boincer umatlas    508880 Jun  6 13:10 input.tar.gz
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas         0 Jun  6 13:10 boinc_lockfile
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 13:10 pandaJob.out
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas    985748 Jun  6 13:10 agis_schedconf.cvmfs.json
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas   1598969 Jun  6 13:10 agis_ddmendpoints.agis.ALL.json
[2025-06-06 14:37:04] drwx------. 4 boincer umatlas      4096 Jun  6 13:10 pilot3
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas      6842 Jun  6 14:28 init_data.xml
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas        95 Jun  6 14:35 pilot_heartbeat.json
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas 203485340 Jun  6 14:36 HITS.44871837._098834.pool.root.1
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas       530 Jun  6 14:36 boinc_task_state.xml
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas      1038 Jun  6 14:36 memory_monitor_summary.json
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas    365735 Jun  6 14:36 log.44871837._098834.job.log.tgz.1
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas      7715 Jun  6 14:36 heartbeat.json
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 14:36 boinc_mmap_file
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas        27 Jun  6 14:36 wrapper_checkpoint.txt
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas      4476 Jun  6 14:37 pilotlog.txt
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas    491543 Jun  6 14:37 log.44871837._098834.job.log.1
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas       357 Jun  6 14:37 output.list
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas       620 Jun  6 14:37 runtime_log
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas    880640 Jun  6 14:37 result.tar.gz
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas      8666 Jun  6 14:37 runtime_log.err
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas       654 Jun  6 14:37 lydLDmmape7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsKeKDmuuPlhn.diag
[2025-06-06 14:37:04] -rw-r--r--. 1 boincer umatlas     21144 Jun  6 14:37 stderr.txt
[2025-06-06 14:37:04] HITS file was successfully produced:
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas 203485340 Jun  6 14:36 shared/HITS.pool.root.1
[2025-06-06 14:37:04]  *** Contents of shared directory: ***
[2025-06-06 14:37:04] total 421764
[2025-06-06 14:37:04] -rw-r--r--. 2 boincer umatlas 226980927 Jun  6 13:10 ATLAS.root_0
[2025-06-06 14:37:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 13:10 start_atlas.sh
[2025-06-06 14:37:04] -rw-r--r--. 2 boincer umatlas    508880 Jun  6 13:10 input.tar.gz
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas 203485340 Jun  6 14:36 HITS.pool.root.1
[2025-06-06 14:37:04] -rw-------. 1 boincer umatlas    880640 Jun  6 14:37 result.tar.gz
14:37:26 (650131): run_atlas exited; CPU time 47376.956264
14:37:26 (650131): called boinc_finish(0)

</stderr_txt>
]]>

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