Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:42:44 (1822): wrapper (7.7.26015): starting
12:42:44 (1822): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 12:42:44] Arguments: --nthreads 12
[2025-06-06 12:42:44] Threads: 12
[2025-06-06 12:42:44] Checking for CVMFS
[2025-06-06 12:42:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 12:42:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 12:42:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 12:42:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 12:42:45] 2.11.2.0 2914 38816 86148 146868 3 58 10336904 20275200 1 130560 0 16703915 99.983 6835605 8248 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 12:42:45] CVMFS is ok
[2025-06-06 12:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 12:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 12:42:45] Further information can be found at the LHC@home message board.
[2025-06-06 12:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 12:42:45] Checking for apptainer binary...
[2025-06-06 12:42:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 12:42:45] Running /usr/bin/apptainer --version
[2025-06-06 12:42:45] apptainer version 1.3.2-1.el7
[2025-06-06 12:42:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 12:42:46] c-205-5.aglt2.org
[2025-06-06 12:42:46] apptainer works
[2025-06-06 12:42:46] Set ATHENA_PROC_NUMBER=12
[2025-06-06 12:42:46] Set ATHENA_CORE_NUMBER=12
[2025-06-06 12:42:46] Starting ATLAS job with PandaID=6677497450
[2025-06-06 12:42:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:50:22]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:50:22]  lfn=log.45006595._023423.job.log.tgz.1
[2025-06-06 13:50:22]  mtime=0
[2025-06-06 13:50:22]  protocol_id=None
[2025-06-06 13:50:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 13:50:22]  replicas=None
[2025-06-06 13:50:22]  scope=mc23_13p6TeV
[2025-06-06 13:50:22]  status=None
[2025-06-06 13:50:22]  status_code=0
[2025-06-06 13:50:22]  storage_token=
[2025-06-06 13:50:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677497450/log.45006595._023423.job.log.tgz.1
[2025-06-06 13:50:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/6a/log.45006595._023423.job.log.tgz.1
[2025-06-06 13:50:22]  workdir=None
[2025-06-06 13:50:22] ]
[2025-06-06 13:50:22] 2025-06-06 17:49:55,856 | INFO     | 4017s have passed since pilot start - server update state is 'RUNNING'
[2025-06-06 13:50:22] 2025-06-06 17:49:55,871 | INFO     | transferring file log.45006595._023423.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677497450/log.45006595._023423.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 13:50:22] 2025-06-06 17:49:55,871 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677497450/log.45006595._023423.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._023423.job
[2025-06-06 13:50:22] 2025-06-06 17:49:55,893 | INFO     | adding to output.list: log.45006595._023423.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/6a/log.45006595._023423.job.log.tg
[2025-06-06 13:50:22] 2025-06-06 17:49:55,894 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 13:50:22] 2025-06-06 17:49:55,894 | INFO     | summary of transferred files:
[2025-06-06 13:50:22] 2025-06-06 17:49:55,894 | INFO     |  -- lfn=log.45006595._023423.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 13:50:22] 2025-06-06 17:49:55,894 | INFO     | stage-out finished correctly
[2025-06-06 13:50:22] 2025-06-06 17:49:56,488 | WARNING  | process 12353 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 13:50:22] 2025-06-06 17:49:56,488 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677497450/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:50:22] 2025-06-06 17:49:56,575 | INFO     | number of running child processes to parent process 12353: 1
[2025-06-06 13:50:22] 2025-06-06 17:49:56,575 | INFO     | maximum number of monitored processes: 6
[2025-06-06 13:50:22] 2025-06-06 17:49:57,141 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 13:50:22] 2025-06-06 17:49:58,340 | INFO     | job 6677497450 has state=finished
[2025-06-06 13:50:22] 2025-06-06 17:49:58,340 | INFO     | preparing for final server update for job 6677497450 in state='finished'
[2025-06-06 13:50:22] 2025-06-06 17:49:58,341 | INFO     | this job has now completed (state=finished)
[2025-06-06 13:50:22] 2025-06-06 17:49:58,342 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 13:50:22] 2025-06-06 17:49:58,342 | INFO     | log transfer has been attempted: DONE
[2025-06-06 13:50:22] 2025-06-06 17:49:58,342 | INFO     | job 6677497450 has finished - writing final server update
[2025-06-06 13:50:22] 2025-06-06 17:49:58,342 | INFO     | total number of processed events: 400 (read)
[2025-06-06 13:50:22] 2025-06-06 17:49:58,344 | INFO     | executing command: lscpu
[2025-06-06 13:50:22] 2025-06-06 17:49:58,368 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 13:50:22] 2025-06-06 17:49:59,078 | INFO     | monitor loop #300: job 0:6677497450 is in state 'finished'
[2025-06-06 13:50:22] 2025-06-06 17:49:59,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:50:22] 2025-06-06 17:50:01,579 | INFO     | monitor loop #301: job 0:6677497450 is in state 'finished'
[2025-06-06 13:50:22] 2025-06-06 17:50:01,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:50:22] 2025-06-06 17:50:03,068 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 13:50:22] 2025-06-06 17:50:03,068 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677497450/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:50:22] 2025-06-06 17:50:03,069 | INFO     | extracted standard info from prmon json
[2025-06-06 13:50:22] 2025-06-06 17:50:03,069 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:50:22] 2025-06-06 17:50:03,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:50:22] 2025-06-06 17:50:03,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:50:22] 2025-06-06 17:50:03,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:50:22] 2025-06-06 17:50:03,073 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:50:22] 2025-06-06 17:50:03,073 | INFO     | sum of square deviations: 63666310.0
[2025-06-06 13:50:22] 2025-06-06 17:50:03,074 | INFO     | sum of deviations: -5835878539.999999
[2025-06-06 13:50:22] 2025-06-06 17:50:03,074 | INFO     | mean x: 1749230286.0
[2025-06-06 13:50:22] 2025-06-06 17:50:03,074 | INFO     | mean y: 2782663.305084746
[2025-06-06 13:50:22] 2025-06-06 17:50:03,074 | INFO     | -- intersect: 160343400606.85263
[2025-06-06 13:50:22] 2025-06-06 17:50:03,074 | INFO     | intersect: 160343400606.85263
[2025-06-06 13:50:22] 2025-06-06 17:50:03,075 | INFO     | chi2: 0.07997852701582009
[2025-06-06 13:50:22] 2025-06-06 17:50:03,075 | INFO     | -- intersect: 160343400606.85263
[2025-06-06 13:50:22] 2025-06-06 17:50:03,075 | INFO     | current memory leak: -91.66 B/s (using 59 data points, chi2=0.08)
[2025-06-06 13:50:22] 2025-06-06 17:50:03,076 | INFO     | ..............................
[2025-06-06 13:50:22] 2025-06-06 17:50:03,076 | INFO     | . Timing measurements:
[2025-06-06 13:50:22] 2025-06-06 17:50:03,076 | INFO     | . get job = 0 s
[2025-06-06 13:50:22] 2025-06-06 17:50:03,076 | INFO     | . initial setup = 2 s
[2025-06-06 13:50:22] 2025-06-06 17:50:03,076 | INFO     | . payload setup = 9 s
[2025-06-06 13:50:22] 2025-06-06 17:50:03,076 | INFO     | . stage-in = 0 s
[2025-06-06 13:50:22] 2025-06-06 17:50:03,077 | INFO     | . payload execution = 3984 s
[2025-06-06 13:50:22] 2025-06-06 17:50:03,077 | INFO     | . stage-out = 0 s
[2025-06-06 13:50:22] 2025-06-06 17:50:03,077 | INFO     | . log creation = 0 s
[2025-06-06 13:50:22] 2025-06-06 17:50:03,077 | INFO     | ..............................
[2025-06-06 13:50:22] 2025-06-06 17:50:03,162 | INFO     | 
[2025-06-06 13:50:22] 2025-06-06 17:50:03,162 | INFO     | job summary report
[2025-06-06 13:50:22] 2025-06-06 17:50:03,163 | INFO     | --------------------------------------------------
[2025-06-06 13:50:22] 2025-06-06 17:50:03,163 | INFO     | PanDA job id: 6677497450
[2025-06-06 13:50:22] 2025-06-06 17:50:03,163 | INFO     | task id: 45006595
[2025-06-06 13:50:22] 2025-06-06 17:50:03,163 | INFO     | errors: (none)
[2025-06-06 13:50:22] 2025-06-06 17:50:03,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:50:22] 2025-06-06 17:50:03,163 | INFO     | pilot state: finished 
[2025-06-06 13:50:22] 2025-06-06 17:50:03,163 | INFO     | transexitcode: 0
[2025-06-06 13:50:22] 2025-06-06 17:50:03,164 | INFO     | exeerrorcode: 0
[2025-06-06 13:50:22] 2025-06-06 17:50:03,164 | INFO     | exeerrordiag: 
[2025-06-06 13:50:22] 2025-06-06 17:50:03,164 | INFO     | exitcode: 0
[2025-06-06 13:50:22] 2025-06-06 17:50:03,164 | INFO     | exitmsg: OK
[2025-06-06 13:50:22] 2025-06-06 17:50:03,164 | INFO     | cpuconsumptiontime: 42487 s
[2025-06-06 13:50:22] 2025-06-06 17:50:03,164 | INFO     | nevents: 400
[2025-06-06 13:50:22] 2025-06-06 17:50:03,164 | INFO     | neventsw: 0
[2025-06-06 13:50:22] 2025-06-06 17:50:03,164 | INFO     | pid: 12353
[2025-06-06 13:50:22] 2025-06-06 17:50:03,165 | INFO     | pgrp: 12353
[2025-06-06 13:50:22] 2025-06-06 17:50:03,165 | INFO     | corecount: 12
[2025-06-06 13:50:22] 2025-06-06 17:50:03,165 | INFO     | event service: False
[2025-06-06 13:50:22] 2025-06-06 17:50:03,165 | INFO     | sizes: {0: 2397169, 1: 2397368, 6: 2397574, 12: 2397602, 3998: 2423280, 3999: 2432221, 4000: 2432405, 4006: 2432575}
[2025-06-06 13:50:22] 2025-06-06 17:50:03,165 | INFO     | --------------------------------------------------
[2025-06-06 13:50:22] 2025-06-06 17:50:03,165 | INFO     | 
[2025-06-06 13:50:22] 2025-06-06 17:50:03,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 13:50:22] 2025-06-06 17:50:03,190 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,191 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,191 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,191 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,193 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:50:22] 2025-06-06 17:50:03,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,193 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:50:22] 2025-06-06 17:50:03,193 | INFO     | job 6677497450 has completed (purged errors)
[2025-06-06 13:50:22] 2025-06-06 17:50:03,193 | INFO     | overall cleanup function is called
[2025-06-06 13:50:22] 2025-06-06 17:50:04,201 | INFO     | --- collectZombieJob: --- 10, [12353]
[2025-06-06 13:50:22] 2025-06-06 17:50:04,201 | INFO     | zombie collector waiting for pid 12353
[2025-06-06 13:50:22] 2025-06-06 17:50:04,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:50:22] 2025-06-06 17:50:04,202 | INFO     | collected zombie processes
[2025-06-06 13:50:22] 2025-06-06 17:50:04,202 | INFO     | will attempt to kill all subprocesses of pid=12353
[2025-06-06 13:50:22] 2025-06-06 17:50:04,303 | INFO     | process IDs to be killed: [12353] (in reverse order)
[2025-06-06 13:50:22] 2025-06-06 17:50:04,357 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:50:22] 2025-06-06 17:50:04,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:50:22] 2025-06-06 17:50:04,362 | INFO     | did not find any defunct processes belonging to 12353
[2025-06-06 13:50:22] 2025-06-06 17:50:04,366 | INFO     | did not find any defunct processes belonging to 12353
[2025-06-06 13:50:22] 2025-06-06 17:50:04,366 | INFO     | ready for new job
[2025-06-06 13:50:22] 2025-06-06 17:50:04,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:50:22] 2025-06-06 17:50:04,368 | INFO     | **************************************
[2025-06-06 13:50:22] 2025-06-06 17:50:04,368 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:50:22] 2025-06-06 17:50:04,368 | INFO     | **************************************
[2025-06-06 13:50:22] 2025-06-06 17:50:04,368 | INFO     | 
[2025-06-06 13:50:22] 2025-06-06 17:50:04,369 | INFO     | architecture information:
[2025-06-06 13:50:22] 2025-06-06 17:50:04,369 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:50:22] 2025-06-06 17:50:04,383 | INFO     | cat /etc/os-release:
[2025-06-06 13:50:22] NAME="CentOS Linux"
[2025-06-06 13:50:22] VERSION="7 (Core)"
[2025-06-06 13:50:22] ID="centos"
[2025-06-06 13:50:22] ID_LIKE="rhel fedora"
[2025-06-06 13:50:22] VERSION_ID="7"
[2025-06-06 13:50:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:50:22] ANSI_COLOR="0;31"
[2025-06-06 13:50:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:50:22] HOME_URL="https://www.centos.org/"
[2025-06-06 13:50:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:50:22] 
[2025-06-06 13:50:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:50:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:50:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:50:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:50:22] 
[2025-06-06 13:50:22] 2025-06-06 17:50:04,384 | INFO     | **************************************
[2025-06-06 13:50:22] 2025-06-06 17:50:04,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 13:50:22] 2025-06-06 17:50:04,904 | INFO     | sufficient remaining disk space (29418848256 B)
[2025-06-06 13:50:22] 2025-06-06 17:50:04,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:50:22] 2025-06-06 17:50:04,904 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:50:22] 2025-06-06 17:50:04,905 | INFO     | update_server=False
[2025-06-06 13:50:22] 2025-06-06 17:50:04,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:50:22] 2025-06-06 17:50:04,905 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 13:50:22] 2025-06-06 17:50:04,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:50:22] 2025-06-06 17:50:04,906 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:50:22] 2025-06-06 17:50:04,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:50:22] 2025-06-06 17:50:04,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:50:22] 2025-06-06 17:50:04,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:50:22] 2025-06-06 17:50:05,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:50:22] 2025-06-06 17:50:05,086 | INFO     | aborting loop
[2025-06-06 13:50:22] 2025-06-06 17:50:05,110 | INFO     | all data control threads have been joined
[2025-06-06 13:50:22] 2025-06-06 17:50:05,910 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:05,912 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:05,926 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:05,966 | INFO     | all payload control threads have been joined
[2025-06-06 13:50:22] 2025-06-06 17:50:06,090 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:06,115 | INFO     | [data] control thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:06,237 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:06,265 | INFO     | all job control threads have been joined
[2025-06-06 13:50:22] 2025-06-06 17:50:06,385 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:06,555 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:06,820 | INFO     | [job] validate thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:06,912 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:06,971 | INFO     | [payload] control thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:07,017 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:07,270 | INFO     | [job] control thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:07,322 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:07,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:50:22] 2025-06-06 17:50:11,737 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:15,745 | INFO     | job.realtimelogging is not enabled
[2025-06-06 13:50:22] 2025-06-06 17:50:16,750 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:50:22] 2025-06-06 17:50:17,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181172733760)>', '<ExcThread(monitor, started 140180149237504)>']
[2025-06-06 13:50:22] 2025-06-06 17:50:17,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:50:22] 2025-06-06 17:50:17,973 | INFO     | [monitor] control thread has ended
[2025-06-06 13:50:22] 2025-06-06 17:50:22,672 | INFO     | all workflow threads have been joined
[2025-06-06 13:50:22] 2025-06-06 17:50:22,672 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:50:22] 2025-06-06 17:50:22,673 | INFO     | traces error code: 0
[2025-06-06 13:50:22] 2025-06-06 17:50:22,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:50:22] 2025-06-06 17:50:22,775 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:50:22] 2025-06-06 17:50:22,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:50:22] 2025-06-06 17:50:22,782 [wrapper] pilotpid: 5903
[2025-06-06 13:50:22] 2025-06-06 17:50:22,786 [wrapper] Pilot exit status: 0
[2025-06-06 13:50:22] 2025-06-06 17:50:22,801 [wrapper] pandaids: 6677497450
[2025-06-06 13:50:22] 2025-06-06 17:50:22,841 [wrapper] cleanup supervisor_pilot 25713 5904
[2025-06-06 13:50:22] 2025-06-06 17:50:22,845 [wrapper] Test setup, not cleaning
[2025-06-06 13:50:22] 2025-06-06 17:50:22,849 [wrapper] apfmon messages muted
[2025-06-06 13:50:22] 2025-06-06 17:50:22,853 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:50:22] 2025-06-06 17:50:22,857 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:50:22]  *** Error codes and diagnostics ***
[2025-06-06 13:50:22]     "exeErrorCode": 0,
[2025-06-06 13:50:22]     "exeErrorDiag": "",
[2025-06-06 13:50:22]     "pilotErrorCode": 0,
[2025-06-06 13:50:22]     "pilotErrorDiag": "",
[2025-06-06 13:50:22]  *** Listing of results directory ***
[2025-06-06 13:50:22] total 393136
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 03:01 pilot3.tar.gz
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 03:02 queuedata.json
[2025-06-06 13:50:22] -rwx------ 1 boincer umatlas     37140 Jun  3 03:03 runpilot2-wrapper.sh
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas       100 Jun  6 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:50:22] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 12:42 run_atlas
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas       105 Jun  6 12:42 job.xml
[2025-06-06 13:50:22] -rw-r--r-- 2 boincer umatlas 213760504 Jun  6 12:42 EVNT.45006593._000937.pool.root.1
[2025-06-06 13:50:22] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 12:42 start_atlas.sh
[2025-06-06 13:50:22] drwxrwx--x 2 boincer umatlas      4096 Jun  6 12:42 shared
[2025-06-06 13:50:22] -rw-r--r-- 2 boincer umatlas    508881 Jun  6 12:42 input.tar.gz
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas         0 Jun  6 12:42 boinc_lockfile
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas      2524 Jun  6 12:42 pandaJob.out
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas    985748 Jun  6 12:42 agis_schedconf.cvmfs.json
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas   1598969 Jun  6 12:42 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:50:22] drwx------ 4 boincer umatlas      4096 Jun  6 12:43 pilot3
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas      5867 Jun  6 13:47 init_data.xml
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas 183484284 Jun  6 13:49 HITS.45006595._023423.pool.root.1
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas       529 Jun  6 13:49 boinc_task_state.xml
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas      1047 Jun  6 13:49 memory_monitor_summary.json
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas        95 Jun  6 13:49 pilot_heartbeat.json
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas    359043 Jun  6 13:49 log.45006595._023423.job.log.tgz.1
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas      7750 Jun  6 13:50 heartbeat.json
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 13:50 boinc_mmap_file
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas        27 Jun  6 13:50 wrapper_checkpoint.txt
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas      4548 Jun  6 13:50 pilotlog.txt
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas    390303 Jun  6 13:50 log.45006595._023423.job.log.1
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas       357 Jun  6 13:50 output.list
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas       620 Jun  6 13:50 runtime_log
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas    768000 Jun  6 13:50 result.tar.gz
[2025-06-06 13:50:22] -rw------- 1 boincer umatlas       658 Jun  6 13:50 sfIKDmBrag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHkXKDmHUOoOn.diag
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas      8656 Jun  6 13:50 runtime_log.err
[2025-06-06 13:50:22] -rw-r--r-- 1 boincer umatlas     21577 Jun  6 13:50 stderr.txt
[2025-06-06 13:50:23] HITS file was successfully produced:
[2025-06-06 13:50:23] -rw------- 1 boincer umatlas 183484284 Jun  6 13:49 shared/HITS.pool.root.1
[2025-06-06 13:50:23]  *** Contents of shared directory: ***
[2025-06-06 13:50:23] total 389208
[2025-06-06 13:50:23] -rw-r--r-- 2 boincer umatlas 213760504 Jun  6 12:42 ATLAS.root_0
[2025-06-06 13:50:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 12:42 start_atlas.sh
[2025-06-06 13:50:23] -rw-r--r-- 2 boincer umatlas    508881 Jun  6 12:42 input.tar.gz
[2025-06-06 13:50:23] -rw------- 1 boincer umatlas 183484284 Jun  6 13:49 HITS.pool.root.1
[2025-06-06 13:50:23] -rw------- 1 boincer umatlas    768000 Jun  6 13:50 result.tar.gz
13:50:24 (1822): run_atlas exited; CPU time 42455.050280
13:50:24 (1822): called boinc_finish(0)

</stderr_txt>
]]>

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