Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:29:24 (3100680): wrapper (7.7.26015): starting
12:29:24 (3100680): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 12:29:24] Arguments: --nthreads 8
[2025-06-06 12:29:24] Threads: 8
[2025-06-06 12:29:24] Checking for CVMFS
[2025-06-06 12:29:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 12:29:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 12:29:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 12:29:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 12:29:25] 2.12.6.0 2443832 26649 551008 146868 2 140 22042449 32935936 21819 16776704 0 156105279 99.630 144860196 26619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 12:29:25] CVMFS is ok
[2025-06-06 12:29:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 12:29:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 12:29:25] Further information can be found at the LHC@home message board.
[2025-06-06 12:29:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 12:29:25] Checking for apptainer binary...
[2025-06-06 12:29:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 12:29:25] Running /usr/bin/apptainer --version
[2025-06-06 12:29:25] apptainer version 1.4.1-1.el9
[2025-06-06 12:29:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 12:29:25] c6-12-29-1.aglt2.org
[2025-06-06 12:29:25] apptainer works
[2025-06-06 12:29:25] Set ATHENA_PROC_NUMBER=8
[2025-06-06 12:29:25] Set ATHENA_CORE_NUMBER=8
[2025-06-06 12:29:25] Starting ATLAS job with PandaID=6670591008
[2025-06-06 12:29:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 14:12:53]  *** The last 200 lines of the pilot log: ***
[2025-06-06 14:12:53] 2025-06-06 18:12:28,695 | INFO     | total number of processed events: 400 (read)
[2025-06-06 14:12:53] 2025-06-06 18:12:28,713 | INFO     | executing command: lscpu
[2025-06-06 14:12:53] 2025-06-06 18:12:28,788 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 14:12:53] 2025-06-06 18:12:29,848 | INFO     | monitor loop #453: job 0:6670591008 is in state 'finished'
[2025-06-06 14:12:53] 2025-06-06 18:12:29,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,350 | INFO     | monitor loop #454: job 0:6670591008 is in state 'finished'
[2025-06-06 14:12:53] 2025-06-06 18:12:32,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,815 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 14:12:53] 2025-06-06 18:12:32,816 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6670591008/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,817 | INFO     | extracted standard info from prmon json
[2025-06-06 14:12:53] 2025-06-06 18:12:32,817 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 14:12:53] 2025-06-06 18:12:32,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 14:12:53] 2025-06-06 18:12:32,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 14:12:53] 2025-06-06 18:12:32,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 14:12:53] 2025-06-06 18:12:32,819 | INFO     | fitting pss+swap vs Time
[2025-06-06 14:12:53] 2025-06-06 18:12:32,819 | INFO     | sum of square deviations: 319447850.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,819 | INFO     | sum of deviations: -10792129150.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,819 | INFO     | mean x: 1749230452.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | mean y: 2345268.702970297
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | -- intersect: 59097815628.252655
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | intersect: 59097815628.252655
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | chi2: 1.9868427232425068
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | sum of square deviations: 274312120.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | sum of deviations: -8834286417.5
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | mean x: 1749230299.5
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | mean y: 2351857.7604166665
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | -- intersect: 56336725548.40269
[2025-06-06 14:12:53] 2025-06-06 18:12:32,820 | INFO     | intersect: 56336725548.40269
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | chi2: 1.989510720814001
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | current chi2=1.989510720814001 (change=-0.13428327971225268 %)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | right removable region: 95
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | sum of square deviations: 274312120.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | sum of deviations: -26700600115.999992
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | mean x: 1749230604.5
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | mean y: 2398057.5833333335
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | -- intersect: 170266500429.08423
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | intersect: 170266500429.08423
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | chi2: 0.2377552254482367
[2025-06-06 14:12:53] 2025-06-06 18:12:32,821 | INFO     | current chi2=0.2377552254482367 (change=88.0335155537514 %)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | sum of square deviations: 233641590.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | sum of deviations: -24451105311.99997
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | mean x: 1749230757.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | mean y: 2389566.10989011
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | -- intersect: 183063228410.7541
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | intersect: 183063228410.7541
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | chi2: 0.22372168444376847
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | current chi2=0.22372168444376847 (change=5.902516328720429 %)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | left removable region: 20
[2025-06-06 14:12:53] 2025-06-06 18:12:32,822 | INFO     | sum of square deviations: 130793150.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | sum of deviations: -16337698198.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | mean x: 1749230879.0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | mean y: 2374971.1733333333
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | -- intersect: 218503161745.7426
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | intersect: 218503161745.7426
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | chi2: 0.19838524072633018
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | -- intersect: 218503161745.7426
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | current memory leak: -124.91 B/s (using 75 data points, chi2=0.20)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,823 | INFO     | ..............................
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | . Timing measurements:
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | . get job = 0 s
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | . initial setup = 3 s
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | . payload setup = 7 s
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | . stage-in = 0 s
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | . payload execution = 6143 s
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | . stage-out = 0 s
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | . log creation = 0 s
[2025-06-06 14:12:53] 2025-06-06 18:12:32,824 | INFO     | ..............................
[2025-06-06 14:12:53] 2025-06-06 18:12:32,883 | INFO     | 
[2025-06-06 14:12:53] 2025-06-06 18:12:32,884 | INFO     | job summary report
[2025-06-06 14:12:53] 2025-06-06 18:12:32,884 | INFO     | --------------------------------------------------
[2025-06-06 14:12:53] 2025-06-06 18:12:32,884 | INFO     | PanDA job id: 6670591008
[2025-06-06 14:12:53] 2025-06-06 18:12:32,884 | INFO     | task id: 44871837
[2025-06-06 14:12:53] 2025-06-06 18:12:32,884 | INFO     | errors: (none)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 14:12:53] 2025-06-06 18:12:32,885 | INFO     | pilot state: finished 
[2025-06-06 14:12:53] 2025-06-06 18:12:32,885 | INFO     | transexitcode: 0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,885 | INFO     | exeerrorcode: 0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,885 | INFO     | exeerrordiag: 
[2025-06-06 14:12:53] 2025-06-06 18:12:32,885 | INFO     | exitcode: 0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,885 | INFO     | exitmsg: OK
[2025-06-06 14:12:53] 2025-06-06 18:12:32,885 | INFO     | cpuconsumptiontime: 45837 s
[2025-06-06 14:12:53] 2025-06-06 18:12:32,885 | INFO     | nevents: 400
[2025-06-06 14:12:53] 2025-06-06 18:12:32,886 | INFO     | neventsw: 0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,886 | INFO     | pid: 3111839
[2025-06-06 14:12:53] 2025-06-06 18:12:32,886 | INFO     | pgrp: 3111839
[2025-06-06 14:12:53] 2025-06-06 18:12:32,886 | INFO     | corecount: 8
[2025-06-06 14:12:53] 2025-06-06 18:12:32,886 | INFO     | event service: False
[2025-06-06 14:12:53] 2025-06-06 18:12:32,886 | INFO     | sizes: {0: 2397219, 1: 2397418, 5: 2397624, 11: 2397680, 6154: 2424260, 6155: 2433201, 6157: 2433385, 6161: 2433555}
[2025-06-06 14:12:53] 2025-06-06 18:12:32,886 | INFO     | --------------------------------------------------
[2025-06-06 14:12:53] 2025-06-06 18:12:32,886 | INFO     | 
[2025-06-06 14:12:53] 2025-06-06 18:12:32,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 14:12:53] 2025-06-06 18:12:32,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | job 6670591008 has completed (purged errors)
[2025-06-06 14:12:53] 2025-06-06 18:12:32,909 | INFO     | overall cleanup function is called
[2025-06-06 14:12:53] 2025-06-06 18:12:33,917 | INFO     | --- collectZombieJob: --- 10, [3111839]
[2025-06-06 14:12:53] 2025-06-06 18:12:33,918 | INFO     | zombie collector waiting for pid 3111839
[2025-06-06 14:12:53] 2025-06-06 18:12:33,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 14:12:53] 2025-06-06 18:12:33,918 | INFO     | collected zombie processes
[2025-06-06 14:12:53] 2025-06-06 18:12:33,918 | INFO     | will attempt to kill all subprocesses of pid=3111839
[2025-06-06 14:12:53] 2025-06-06 18:12:34,183 | INFO     | process IDs to be killed: [3111839] (in reverse order)
[2025-06-06 14:12:53] 2025-06-06 18:12:34,299 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 14:12:53] 2025-06-06 18:12:34,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 14:12:53] 2025-06-06 18:12:34,317 | INFO     | did not find any defunct processes belonging to 3111839
[2025-06-06 14:12:53] 2025-06-06 18:12:34,329 | INFO     | did not find any defunct processes belonging to 3111839
[2025-06-06 14:12:53] 2025-06-06 18:12:34,329 | INFO     | ready for new job
[2025-06-06 14:12:53] 2025-06-06 18:12:34,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 14:12:53] 2025-06-06 18:12:34,330 | INFO     | **************************************
[2025-06-06 14:12:53] 2025-06-06 18:12:34,330 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 14:12:53] 2025-06-06 18:12:34,330 | INFO     | **************************************
[2025-06-06 14:12:53] 2025-06-06 18:12:34,330 | INFO     | 
[2025-06-06 14:12:53] 2025-06-06 18:12:34,346 | INFO     | architecture information:
[2025-06-06 14:12:53] 2025-06-06 18:12:34,347 | INFO     | executing command: cat /etc/os-release
[2025-06-06 14:12:53] 2025-06-06 18:12:34,365 | INFO     | cat /etc/os-release:
[2025-06-06 14:12:53] NAME="CentOS Linux"
[2025-06-06 14:12:53] VERSION="7 (Core)"
[2025-06-06 14:12:53] ID="centos"
[2025-06-06 14:12:53] ID_LIKE="rhel fedora"
[2025-06-06 14:12:53] VERSION_ID="7"
[2025-06-06 14:12:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 14:12:53] ANSI_COLOR="0;31"
[2025-06-06 14:12:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 14:12:53] HOME_URL="https://www.centos.org/"
[2025-06-06 14:12:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 14:12:53] 
[2025-06-06 14:12:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 14:12:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 14:12:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 14:12:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 14:12:53] 
[2025-06-06 14:12:53] 2025-06-06 18:12:34,366 | INFO     | **************************************
[2025-06-06 14:12:53] 2025-06-06 18:12:34,869 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 14:12:53] 2025-06-06 18:12:34,892 | INFO     | sufficient remaining disk space (96608452608 B)
[2025-06-06 14:12:53] 2025-06-06 18:12:34,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 14:12:53] 2025-06-06 18:12:34,892 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 14:12:53] 2025-06-06 18:12:34,892 | INFO     | update_server=False
[2025-06-06 14:12:53] 2025-06-06 18:12:34,892 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 14:12:53] 2025-06-06 18:12:34,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 14:12:53] 2025-06-06 18:12:34,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 14:12:53] 2025-06-06 18:12:34,986 | INFO     | all job control threads have been joined
[2025-06-06 14:12:53] 2025-06-06 18:12:35,244 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 14:12:53] 2025-06-06 18:12:35,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 14:12:53] 2025-06-06 18:12:35,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 14:12:53] 2025-06-06 18:12:35,646 | INFO     | all data control threads have been joined
[2025-06-06 14:12:53] 2025-06-06 18:12:35,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:12:53] 2025-06-06 18:12:35,859 | INFO     | aborting loop
[2025-06-06 14:12:53] 2025-06-06 18:12:35,897 | INFO     | [job] retrieve thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:35,930 | INFO     | [payload] validate_post thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:35,992 | INFO     | [job] control thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,044 | INFO     | all payload control threads have been joined
[2025-06-06 14:12:53] 2025-06-06 18:12:36,142 | INFO     | [payload] failed_post thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,321 | INFO     | [job] validate thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,402 | INFO     | [data] copytool_in thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,476 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,651 | INFO     | [data] control thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,767 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,768 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,863 | INFO     | [job] job monitor thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:36,898 | INFO     | [data] copytool_out thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:37,050 | INFO     | [payload] control thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:37,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:12:53] 2025-06-06 18:12:38,900 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:38,901 | INFO     | [job] queue monitor thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:45,302 | INFO     | job.realtimelogging is not enabled
[2025-06-06 14:12:53] 2025-06-06 18:12:46,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 14:12:53] 2025-06-06 18:12:47,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140158182385472)>', '<ExcThread(monitor, started 140157818738432)>']
[2025-06-06 14:12:53] 2025-06-06 18:12:48,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 14:12:53] 2025-06-06 18:12:48,311 | INFO     | [monitor] control thread has ended
[2025-06-06 14:12:53] 2025-06-06 18:12:52,726 | INFO     | all workflow threads have been joined
[2025-06-06 14:12:53] 2025-06-06 18:12:52,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 14:12:53] 2025-06-06 18:12:52,727 | INFO     | traces error code: 0
[2025-06-06 14:12:53] 2025-06-06 18:12:52,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 14:12:53] 2025-06-06 18:12:52,924 [wrapper] ==== pilot stdout END ====
[2025-06-06 14:12:53] 2025-06-06 18:12:52,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 14:12:53] 2025-06-06 18:12:52,930 [wrapper] pilotpid: 3104430
[2025-06-06 14:12:53] 2025-06-06 18:12:52,932 [wrapper] Pilot exit status: 0
[2025-06-06 14:12:53] 2025-06-06 18:12:52,943 [wrapper] pandaids: 6670591008
[2025-06-06 14:12:53] 2025-06-06 18:12:53,026 [wrapper] cleanup supervisor_pilot 3608295 3104431
[2025-06-06 14:12:53] 2025-06-06 18:12:53,029 [wrapper] Test setup, not cleaning
[2025-06-06 14:12:53] 2025-06-06 18:12:53,031 [wrapper] apfmon messages muted
[2025-06-06 14:12:53] 2025-06-06 18:12:53,033 [wrapper] ==== wrapper stdout END ====
[2025-06-06 14:12:53] 2025-06-06 18:12:53,035 [wrapper] ==== wrapper stderr END ====
[2025-06-06 14:12:53]  *** Error codes and diagnostics ***
[2025-06-06 14:12:53]     "exeErrorCode": 0,
[2025-06-06 14:12:53]     "exeErrorDiag": "",
[2025-06-06 14:12:53]     "pilotErrorCode": 0,
[2025-06-06 14:12:53]     "pilotErrorDiag": "",
[2025-06-06 14:12:53]  *** Listing of results directory ***
[2025-06-06 14:12:53] total 416696
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas    495897 May 29 06:07 pilot3.tar.gz
[2025-06-06 14:12:53] -rwx------. 1 boincer umatlas     37140 May 29 06:17 runpilot2-wrapper.sh
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas      5111 May 29 06:17 queuedata.json
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas       100 Jun  6 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 14:12:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 12:29 run_atlas
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas       105 Jun  6 12:29 job.xml
[2025-06-06 14:12:53] -rw-r--r--. 2 boincer umatlas 224553136 Jun  6 12:29 EVNT.44871834._000571.pool.root.1
[2025-06-06 14:12:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 12:29 start_atlas.sh
[2025-06-06 14:12:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 12:29 shared
[2025-06-06 14:12:53] -rw-r--r--. 2 boincer umatlas    508880 Jun  6 12:29 input.tar.gz
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas         0 Jun  6 12:29 boinc_lockfile
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas      2558 Jun  6 12:29 pandaJob.out
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas    985748 Jun  6 12:29 agis_schedconf.cvmfs.json
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas   1598969 Jun  6 12:29 agis_ddmendpoints.agis.ALL.json
[2025-06-06 14:12:53] drwx------. 4 boincer umatlas      4096 Jun  6 12:29 pilot3
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas      6858 Jun  6 14:09 init_data.xml
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas 196465741 Jun  6 14:11 HITS.44871837._098736.pool.root.1
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas        95 Jun  6 14:11 pilot_heartbeat.json
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas       529 Jun  6 14:11 boinc_task_state.xml
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas      1046 Jun  6 14:12 memory_monitor_summary.json
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas    331850 Jun  6 14:12 log.44871837._098736.job.log.tgz.1
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 14:12 boinc_mmap_file
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas        27 Jun  6 14:12 wrapper_checkpoint.txt
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas      7734 Jun  6 14:12 heartbeat.json
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas      4425 Jun  6 14:12 pilotlog.txt
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas    590982 Jun  6 14:12 log.44871837._098736.job.log.1
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas       357 Jun  6 14:12 output.list
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas       620 Jun  6 14:12 runtime_log
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas    942080 Jun  6 14:12 result.tar.gz
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas      8669 Jun  6 14:12 runtime_log.err
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas       655 Jun  6 14:12 4APMDmHVpe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJ4UKDmFeBVgm.diag
[2025-06-06 14:12:53] -rw-r--r--. 1 boincer umatlas     21087 Jun  6 14:12 stderr.txt
[2025-06-06 14:12:53] HITS file was successfully produced:
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas 196465741 Jun  6 14:11 shared/HITS.pool.root.1
[2025-06-06 14:12:53]  *** Contents of shared directory: ***
[2025-06-06 14:12:53] total 412596
[2025-06-06 14:12:53] -rw-r--r--. 2 boincer umatlas 224553136 Jun  6 12:29 ATLAS.root_0
[2025-06-06 14:12:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 12:29 start_atlas.sh
[2025-06-06 14:12:53] -rw-r--r--. 2 boincer umatlas    508880 Jun  6 12:29 input.tar.gz
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas 196465741 Jun  6 14:11 HITS.pool.root.1
[2025-06-06 14:12:53] -rw-------. 1 boincer umatlas    942080 Jun  6 14:12 result.tar.gz
14:12:54 (3100680): run_atlas exited; CPU time 46071.862478
14:12:54 (3100680): called boinc_finish(0)

</stderr_txt>
]]>

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