Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:13:56 (3048360): wrapper (7.7.26015): starting
12:13:56 (3048360): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 12:13:56] Arguments: --nthreads 10
[2025-06-06 12:13:56] Threads: 10
[2025-06-06 12:13:56] Checking for CVMFS
[2025-06-06 12:13:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 12:13:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 12:13:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 12:13:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 12:13:57] 2.12.6.0 9377 4442 238288 146867 2 263 32618659 32935937 16142 16776704 0 18970780 99.579 19509681 31720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 12:13:57] CVMFS is ok
[2025-06-06 12:13:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 12:13:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 12:13:57] Further information can be found at the LHC@home message board.
[2025-06-06 12:13:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 12:13:57] Checking for apptainer binary...
[2025-06-06 12:13:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 12:13:57] Running /usr/bin/apptainer --version
[2025-06-06 12:13:57] apptainer version 1.4.1-1.el9
[2025-06-06 12:13:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 12:13:58] c-8-15.aglt2.org
[2025-06-06 12:13:58] apptainer works
[2025-06-06 12:13:58] Set ATHENA_PROC_NUMBER=10
[2025-06-06 12:13:58] Set ATHENA_CORE_NUMBER=10
[2025-06-06 12:13:58] Starting ATLAS job with PandaID=6682306765
[2025-06-06 12:13:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 18:07:51]  *** The last 200 lines of the pilot log: ***
[2025-06-06 18:07:51] 2025-06-06 22:07:16,968 | INFO     | PID=3051972 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 18:07:51] 2025-06-06 22:07:16,968 | INFO     | .. there are 20 such processes running
[2025-06-06 18:07:51] 2025-06-06 22:07:18,999 | INFO     | monitor loop #1274: job 0:6682306765 is in state 'finished'
[2025-06-06 18:07:51] 2025-06-06 22:07:19,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,505 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 18:07:51] 2025-06-06 22:07:19,509 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2740.005774999999
[2025-06-06 18:07:51] 2025-06-06 22:07:19,513 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6682306765/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,514 | INFO     | extracted standard info from prmon json
[2025-06-06 18:07:51] 2025-06-06 22:07:19,514 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 18:07:51] 2025-06-06 22:07:19,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 18:07:51] 2025-06-06 22:07:19,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 18:07:51] 2025-06-06 22:07:19,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 18:07:51] 2025-06-06 22:07:19,518 | INFO     | fitting pss+swap vs Time
[2025-06-06 18:07:51] 2025-06-06 22:07:19,519 | INFO     | sum of square deviations: 12843774003.433548
[2025-06-06 18:07:51] 2025-06-06 22:07:19,521 | INFO     | sum of deviations: -56876509017.40463
[2025-06-06 18:07:51] 2025-06-06 22:07:19,521 | INFO     | mean x: 1749237082.0404625
[2025-06-06 18:07:51] 2025-06-06 22:07:19,521 | INFO     | mean y: 2247973.528901734
[2025-06-06 18:07:51] 2025-06-06 22:07:19,521 | INFO     | -- intersect: 7748452371.368351
[2025-06-06 18:07:51] 2025-06-06 22:07:19,521 | INFO     | intersect: 7748452371.368351
[2025-06-06 18:07:51] 2025-06-06 22:07:19,521 | INFO     | chi2: 4.122363419555106
[2025-06-06 18:07:51] 2025-06-06 22:07:19,522 | INFO     | sum of square deviations: 12295011444.451715
[2025-06-06 18:07:51] 2025-06-06 22:07:19,524 | INFO     | sum of deviations: -35196175444.806496
[2025-06-06 18:07:51] 2025-06-06 22:07:19,524 | INFO     | mean x: 1749236929.548387
[2025-06-06 18:07:51] 2025-06-06 22:07:19,524 | INFO     | mean y: 2253936.53372434
[2025-06-06 18:07:51] 2025-06-06 22:07:19,524 | INFO     | -- intersect: 5009687247.602526
[2025-06-06 18:07:51] 2025-06-06 22:07:19,524 | INFO     | intersect: 5009687247.602526
[2025-06-06 18:07:51] 2025-06-06 22:07:19,524 | INFO     | chi2: 3.4733012431076014
[2025-06-06 18:07:51] 2025-06-06 22:07:19,524 | INFO     | current chi2=3.4733012431076014 (change=15.744904327662429 %)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,524 | INFO     | right removable region: 340
[2025-06-06 18:07:51] 2025-06-06 22:07:19,525 | INFO     | sum of square deviations: 12294897374.451714
[2025-06-06 18:07:51] 2025-06-06 22:07:19,527 | INFO     | sum of deviations: -135137721535.58063
[2025-06-06 18:07:51] 2025-06-06 22:07:19,527 | INFO     | mean x: 1749237234.548387
[2025-06-06 18:07:51] 2025-06-06 22:07:19,527 | INFO     | mean y: 2269670.1260997066
[2025-06-06 18:07:51] 2025-06-06 22:07:19,527 | INFO     | -- intersect: 19228776984.719337
[2025-06-06 18:07:51] 2025-06-06 22:07:19,527 | INFO     | intersect: 19228776984.719337
[2025-06-06 18:07:51] 2025-06-06 22:07:19,527 | INFO     | chi2: 1.5718980052950786
[2025-06-06 18:07:51] 2025-06-06 22:07:19,527 | INFO     | current chi2=1.5718980052950786 (change=61.86900946581947 %)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,528 | INFO     | sum of square deviations: 11761902065.035706
[2025-06-06 18:07:51] 2025-06-06 22:07:19,530 | INFO     | sum of deviations: -154565446552.17877
[2025-06-06 18:07:51] 2025-06-06 22:07:19,530 | INFO     | mean x: 1749237387.0535715
[2025-06-06 18:07:51] 2025-06-06 22:07:19,530 | INFO     | mean y: 2275196.0654761903
[2025-06-06 18:07:51] 2025-06-06 22:07:19,530 | INFO     | -- intersect: 22989344494.952797
[2025-06-06 18:07:51] 2025-06-06 22:07:19,530 | INFO     | intersect: 22989344494.952797
[2025-06-06 18:07:51] 2025-06-06 22:07:19,530 | INFO     | chi2: 1.2862926522347484
[2025-06-06 18:07:51] 2025-06-06 22:07:19,530 | INFO     | current chi2=1.2862926522347484 (change=18.169458329881653 %)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,530 | INFO     | left removable region: 20
[2025-06-06 18:07:51] 2025-06-06 22:07:19,531 | INFO     | sum of square deviations: 10160465153.199959
[2025-06-06 18:07:51] 2025-06-06 22:07:19,532 | INFO     | sum of deviations: -106115976662.09982
[2025-06-06 18:07:51] 2025-06-06 22:07:19,532 | INFO     | mean x: 1749237509.05
[2025-06-06 18:07:51] 2025-06-06 22:07:19,532 | INFO     | mean y: 2273988.63125
[2025-06-06 18:07:51] 2025-06-06 22:07:19,532 | INFO     | -- intersect: 18271324065.37495
[2025-06-06 18:07:51] 2025-06-06 22:07:19,533 | INFO     | intersect: 18271324065.37495
[2025-06-06 18:07:51] 2025-06-06 22:07:19,533 | INFO     | chi2: 0.5742098794374638
[2025-06-06 18:07:51] 2025-06-06 22:07:19,533 | INFO     | -- intersect: 18271324065.37495
[2025-06-06 18:07:51] 2025-06-06 22:07:19,533 | INFO     | current memory leak: -10.44 B/s (using 320 data points, chi2=0.57)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,533 | INFO     | could have reported an average CPU frequency of 2609 MHz (15 samples)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | ..............................
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | . Timing measurements:
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | . get job = 0 s
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | . initial setup = 5 s
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | . payload setup = 30 s
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | . stage-in = 0 s
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | . payload execution = 21084 s
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | . stage-out = 2 s
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | . log creation = 0 s
[2025-06-06 18:07:51] 2025-06-06 22:07:19,534 | INFO     | ..............................
[2025-06-06 18:07:51] 2025-06-06 22:07:19,916 | INFO     | 
[2025-06-06 18:07:51] 2025-06-06 22:07:19,916 | INFO     | job summary report
[2025-06-06 18:07:51] 2025-06-06 22:07:19,916 | INFO     | --------------------------------------------------
[2025-06-06 18:07:51] 2025-06-06 22:07:19,916 | INFO     | PanDA job id: 6682306765
[2025-06-06 18:07:51] 2025-06-06 22:07:19,916 | INFO     | task id: 44871837
[2025-06-06 18:07:51] 2025-06-06 22:07:19,916 | INFO     | errors: (none)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,916 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | pilot state: finished 
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | transexitcode: 0
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | exeerrorcode: 0
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | exeerrordiag: 
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | exitcode: 0
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | exitmsg: OK
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | cpuconsumptiontime: 61345 s
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | nevents: 400
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | neventsw: 0
[2025-06-06 18:07:51] 2025-06-06 22:07:19,917 | INFO     | pid: 3060292
[2025-06-06 18:07:51] 2025-06-06 22:07:19,918 | INFO     | pgrp: 3060292
[2025-06-06 18:07:51] 2025-06-06 22:07:19,918 | INFO     | corecount: 10
[2025-06-06 18:07:51] 2025-06-06 22:07:19,918 | INFO     | event service: False
[2025-06-06 18:07:51] 2025-06-06 22:07:19,918 | INFO     | sizes: {0: 2397455, 1: 2397710, 12: 2397710, 18: 2398000, 23: 2398028, 21119: 2431671, 21121: 2440612, 21123: 2440668, 21129: 2440862}
[2025-06-06 18:07:51] 2025-06-06 22:07:19,918 | INFO     | --------------------------------------------------
[2025-06-06 18:07:51] 2025-06-06 22:07:19,918 | INFO     | 
[2025-06-06 18:07:51] 2025-06-06 22:07:19,918 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 18:07:51] 2025-06-06 22:07:19,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,939 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,939 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 18:07:51] 2025-06-06 22:07:19,941 | INFO     | job 6682306765 has completed (purged errors)
[2025-06-06 18:07:51] 2025-06-06 22:07:19,942 | INFO     | overall cleanup function is called
[2025-06-06 18:07:51] 2025-06-06 22:07:20,949 | INFO     | --- collectZombieJob: --- 10, [3060292]
[2025-06-06 18:07:51] 2025-06-06 22:07:20,950 | INFO     | zombie collector waiting for pid 3060292
[2025-06-06 18:07:51] 2025-06-06 22:07:20,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 18:07:51] 2025-06-06 22:07:20,950 | INFO     | collected zombie processes
[2025-06-06 18:07:51] 2025-06-06 22:07:20,951 | INFO     | will attempt to kill all subprocesses of pid=3060292
[2025-06-06 18:07:51] 2025-06-06 22:07:21,269 | INFO     | process IDs to be killed: [3060292] (in reverse order)
[2025-06-06 18:07:51] 2025-06-06 22:07:21,328 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 18:07:51] 2025-06-06 22:07:21,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 18:07:51] 2025-06-06 22:07:21,335 | INFO     | did not find any defunct processes belonging to 3060292
[2025-06-06 18:07:51] 2025-06-06 22:07:21,342 | INFO     | did not find any defunct processes belonging to 3060292
[2025-06-06 18:07:51] 2025-06-06 22:07:21,342 | INFO     | ready for new job
[2025-06-06 18:07:51] 2025-06-06 22:07:21,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 18:07:51] 2025-06-06 22:07:21,344 | INFO     | ***************************************
[2025-06-06 18:07:51] 2025-06-06 22:07:21,344 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 18:07:51] 2025-06-06 22:07:21,344 | INFO     | ***************************************
[2025-06-06 18:07:51] 2025-06-06 22:07:21,344 | INFO     | 
[2025-06-06 18:07:51] 2025-06-06 22:07:21,358 | INFO     | architecture information:
[2025-06-06 18:07:51] 2025-06-06 22:07:21,358 | INFO     | executing command: cat /etc/os-release
[2025-06-06 18:07:51] 2025-06-06 22:07:21,367 | INFO     | cat /etc/os-release:
[2025-06-06 18:07:51] NAME="CentOS Linux"
[2025-06-06 18:07:51] VERSION="7 (Core)"
[2025-06-06 18:07:51] ID="centos"
[2025-06-06 18:07:51] ID_LIKE="rhel fedora"
[2025-06-06 18:07:51] VERSION_ID="7"
[2025-06-06 18:07:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 18:07:51] ANSI_COLOR="0;31"
[2025-06-06 18:07:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 18:07:51] HOME_URL="https://www.centos.org/"
[2025-06-06 18:07:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 18:07:51] 
[2025-06-06 18:07:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 18:07:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 18:07:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 18:07:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 18:07:51] 
[2025-06-06 18:07:51] 2025-06-06 22:07:21,367 | INFO     | ***************************************
[2025-06-06 18:07:51] 2025-06-06 22:07:21,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 18:07:51] 2025-06-06 22:07:21,888 | INFO     | sufficient remaining disk space (76557582336 B)
[2025-06-06 18:07:51] 2025-06-06 22:07:21,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 18:07:51] 2025-06-06 22:07:21,888 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 18:07:51] 2025-06-06 22:07:21,889 | INFO     | update_server=False
[2025-06-06 18:07:51] 2025-06-06 22:07:21,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 18:07:51] 2025-06-06 22:07:22,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 18:07:51] 2025-06-06 22:07:22,207 | INFO     | all payload control threads have been joined
[2025-06-06 18:07:51] 2025-06-06 22:07:22,424 | INFO     | all data control threads have been joined
[2025-06-06 18:07:51] 2025-06-06 22:07:22,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:07:51] 2025-06-06 22:07:22,508 | INFO     | aborting loop
[2025-06-06 18:07:51] 2025-06-06 22:07:22,833 | INFO     | all job control threads have been joined
[2025-06-06 18:07:51] 2025-06-06 22:07:22,893 | INFO     | [job] retrieve thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,211 | INFO     | [payload] control thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,429 | INFO     | [data] control thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,497 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 18:07:51] 2025-06-06 22:07:23,513 | INFO     | [job] job monitor thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,683 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,840 | INFO     | [job] control thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,848 | INFO     | [job] validate thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:23,996 | INFO     | [data] copytool_in thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:24,137 | INFO     | [data] copytool_out thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:24,179 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:24,394 | INFO     | [payload] failed_post thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:24,496 | INFO     | [payload] validate_post thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:24,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:07:51] 2025-06-06 22:07:25,614 | INFO     | [job] queue monitor thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:27,510 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 18:07:51] 2025-06-06 22:07:29,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504345208640)>', '<ExcThread(monitor, started 140503832041216)>']
[2025-06-06 18:07:51] 2025-06-06 22:07:34,143 | INFO     | all workflow threads have been joined
[2025-06-06 18:07:51] 2025-06-06 22:07:34,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 18:07:51] 2025-06-06 22:07:34,144 | INFO     | traces error code: 0
[2025-06-06 18:07:51] 2025-06-06 22:07:34,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 18:07:51] 2025-06-06 22:07:51,469 | INFO     | PID=3051972 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 18:07:51] 2025-06-06 22:07:51,470 | INFO     | .. there are 20 such processes running
[2025-06-06 18:07:51] 2025-06-06 22:07:51,471 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 18:07:51] 2025-06-06 22:07:51,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 18:07:51] 2025-06-06 22:07:51,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 18:07:51] 2025-06-06 22:07:51,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 18:07:51] 2025-06-06 22:07:51,471 | INFO     | [monitor] control thread has ended
[2025-06-06 18:07:51] 2025-06-06 22:07:51,622 [wrapper] ==== pilot stdout END ====
[2025-06-06 18:07:51] 2025-06-06 22:07:51,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 18:07:51] 2025-06-06 22:07:51,627 [wrapper] pilotpid: 3051972
[2025-06-06 18:07:51] 2025-06-06 22:07:51,630 [wrapper] Pilot exit status: 0
[2025-06-06 18:07:51] 2025-06-06 22:07:51,641 [wrapper] pandaids: 6682306765
[2025-06-06 18:07:51] 2025-06-06 22:07:51,698 [wrapper] cleanup supervisor_pilot 4083334 3051973
[2025-06-06 18:07:51] 2025-06-06 22:07:51,701 [wrapper] Test setup, not cleaning
[2025-06-06 18:07:51] 2025-06-06 22:07:51,704 [wrapper] apfmon messages muted
[2025-06-06 18:07:51] 2025-06-06 22:07:51,707 [wrapper] ==== wrapper stdout END ====
[2025-06-06 18:07:51] 2025-06-06 22:07:51,709 [wrapper] ==== wrapper stderr END ====
[2025-06-06 18:07:51]  *** Error codes and diagnostics ***
[2025-06-06 18:07:51]     "exeErrorCode": 0,
[2025-06-06 18:07:51]     "exeErrorDiag": "",
[2025-06-06 18:07:51]     "pilotErrorCode": 0,
[2025-06-06 18:07:51]     "pilotErrorDiag": "",
[2025-06-06 18:07:51]  *** Listing of results directory ***
[2025-06-06 18:07:51] total 417308
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas    529402 Jun  6 11:12 pilot3.tar.gz
[2025-06-06 18:07:51] -rwx------. 1 boincer umatlas     37140 Jun  6 12:07 runpilot2-wrapper.sh
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas      5112 Jun  6 12:07 queuedata.json
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas       100 Jun  6 12:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 18:07:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 12:13 run_atlas
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas       105 Jun  6 12:13 job.xml
[2025-06-06 18:07:51] -rw-r--r--. 2 boincer umatlas 225064466 Jun  6 12:13 EVNT.44871834._002977.pool.root.1
[2025-06-06 18:07:51] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 12:13 shared
[2025-06-06 18:07:51] -rw-r--r--. 2 boincer umatlas    541906 Jun  6 12:13 input.tar.gz
[2025-06-06 18:07:51] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 12:13 start_atlas.sh
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas         0 Jun  6 12:13 boinc_lockfile
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas      2558 Jun  6 12:13 pandaJob.out
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas    985740 Jun  6 12:14 agis_schedconf.cvmfs.json
[2025-06-06 18:07:51] drwx------. 4 boincer umatlas      4096 Jun  6 12:14 pilot3
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas      6659 Jun  6 18:00 init_data.xml
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas       531 Jun  6 18:06 boinc_task_state.xml
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas 193978271 Jun  6 18:06 HITS.44871837._102347.pool.root.1
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas      1043 Jun  6 18:07 memory_monitor_summary.json
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas   1598969 Jun  6 18:07 agis_ddmendpoints.agis.ALL.json
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas    496162 Jun  6 18:07 log.44871837._102347.job.log.tgz.1
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas      7759 Jun  6 18:07 heartbeat.json
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 18:07 boinc_mmap_file
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas        28 Jun  6 18:07 wrapper_checkpoint.txt
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas       823 Jun  6 18:07 pilotlog.txt
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas        95 Jun  6 18:07 pilot_heartbeat.json
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas   1696815 Jun  6 18:07 log.44871837._102347.job.log.1
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas       357 Jun  6 18:07 output.list
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas       620 Jun  6 18:07 runtime_log
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas   2211840 Jun  6 18:07 result.tar.gz
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas      8653 Jun  6 18:07 runtime_log.err
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas       655 Jun  6 18:07 KlFLDmwmoh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmC7nKDmB6AFdn.diag
[2025-06-06 18:07:51] -rw-r--r--. 1 boincer umatlas     21323 Jun  6 18:07 stderr.txt
[2025-06-06 18:07:51] HITS file was successfully produced:
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas 193978271 Jun  6 18:06 shared/HITS.pool.root.1
[2025-06-06 18:07:51]  *** Contents of shared directory: ***
[2025-06-06 18:07:51] total 411940
[2025-06-06 18:07:51] -rw-r--r--. 2 boincer umatlas 225064466 Jun  6 12:13 ATLAS.root_0
[2025-06-06 18:07:51] -rw-r--r--. 2 boincer umatlas    541906 Jun  6 12:13 input.tar.gz
[2025-06-06 18:07:51] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 12:13 start_atlas.sh
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas 193978271 Jun  6 18:06 HITS.pool.root.1
[2025-06-06 18:07:51] -rw-------. 1 boincer umatlas   2211840 Jun  6 18:07 result.tar.gz
18:07:52 (3048360): run_atlas exited; CPU time 61924.433964
18:07:52 (3048360): called boinc_finish(0)

</stderr_txt>
]]>

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