Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:52:35 (2256): wrapper (7.7.26015): starting
11:52:35 (2256): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 11:52:35] Arguments: --nthreads 8
[2025-06-06 11:52:35] Threads: 8
[2025-06-06 11:52:35] Checking for CVMFS
[2025-06-06 11:52:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:52:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:52:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:52:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:52:36] 2.11.2.0 3213 443703 244120 146867 2 1 16270228 20275200 1 130560 0 131712557 99.991 19811627 18509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 11:52:36] CVMFS is ok
[2025-06-06 11:52:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:52:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 11:52:36] Further information can be found at the LHC@home message board.
[2025-06-06 11:52:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:52:36] Checking for apptainer binary...
[2025-06-06 11:52:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 11:52:36] Running /usr/bin/apptainer --version
[2025-06-06 11:52:36] apptainer version 1.3.2-1.el7
[2025-06-06 11:52:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:52:37] c-205-38.aglt2.org
[2025-06-06 11:52:37] apptainer works
[2025-06-06 11:52:37] Set ATHENA_PROC_NUMBER=8
[2025-06-06 11:52:37] Set ATHENA_CORE_NUMBER=8
[2025-06-06 11:52:37] Starting ATLAS job with PandaID=6669902437
[2025-06-06 11:52:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:04:43]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:04:43]  guid=6f5418ec-22ca-45ba-bb14-a9483e1021d1
[2025-06-06 13:04:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 13:04:43]  is_altstaged=None
[2025-06-06 13:04:43]  is_tar=False
[2025-06-06 13:04:43]  lfn=log.44871837._098266.job.log.tgz.1
[2025-06-06 13:04:43]  mtime=0
[2025-06-06 13:04:43]  protocol_id=None
[2025-06-06 13:04:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 13:04:43]  replicas=None
[2025-06-06 13:04:43]  scope=mc23_13p6TeV
[2025-06-06 13:04:43]  status=None
[2025-06-06 13:04:43]  status_code=0
[2025-06-06 13:04:43]  storage_token=
[2025-06-06 13:04:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669902437/log.44871837._098266.job.log.tgz.1
[2025-06-06 13:04:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/e4/log.44871837._098266.job.log.tgz.1
[2025-06-06 13:04:43]  workdir=None
[2025-06-06 13:04:43] ]
[2025-06-06 13:04:43] 2025-06-06 17:04:23,196 | INFO     | transferring file log.44871837._098266.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669902437/log.44871837._098266.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 13:04:43] 2025-06-06 17:04:23,197 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669902437/log.44871837._098266.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._098266.job
[2025-06-06 13:04:43] 2025-06-06 17:04:23,215 | INFO     | adding to output.list: log.44871837._098266.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/e4/log.44871837._098266.job.log.tg
[2025-06-06 13:04:43] 2025-06-06 17:04:23,216 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 13:04:43] 2025-06-06 17:04:23,216 | INFO     | summary of transferred files:
[2025-06-06 13:04:43] 2025-06-06 17:04:23,216 | INFO     |  -- lfn=log.44871837._098266.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 13:04:43] 2025-06-06 17:04:23,216 | INFO     | stage-out finished correctly
[2025-06-06 13:04:43] 2025-06-06 17:04:23,272 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 13:04:43] 2025-06-06 17:04:24,935 | INFO     | monitor loop #331: job 0:6669902437 is in state 'finished'
[2025-06-06 13:04:43] 2025-06-06 17:04:24,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:04:43] 2025-06-06 17:04:25,565 | INFO     | job 6669902437 has state=finished
[2025-06-06 13:04:43] 2025-06-06 17:04:25,565 | INFO     | preparing for final server update for job 6669902437 in state='finished'
[2025-06-06 13:04:43] 2025-06-06 17:04:25,566 | INFO     | this job has now completed (state=finished)
[2025-06-06 13:04:43] 2025-06-06 17:04:25,566 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 13:04:43] 2025-06-06 17:04:25,566 | INFO     | log transfer has been attempted: DONE
[2025-06-06 13:04:43] 2025-06-06 17:04:25,566 | INFO     | job 6669902437 has finished - writing final server update
[2025-06-06 13:04:43] 2025-06-06 17:04:25,567 | INFO     | total number of processed events: 400 (read)
[2025-06-06 13:04:43] 2025-06-06 17:04:25,568 | INFO     | executing command: lscpu
[2025-06-06 13:04:43] 2025-06-06 17:04:25,600 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 13:04:43] 2025-06-06 17:04:26,019 | INFO     | PID=5951 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-06 13:04:43] 2025-06-06 17:04:27,439 | INFO     | monitor loop #332: job 0:6669902437 is in state 'finished'
[2025-06-06 13:04:43] 2025-06-06 17:04:27,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:04:43] 2025-06-06 17:04:29,942 | INFO     | monitor loop #333: job 0:6669902437 is in state 'finished'
[2025-06-06 13:04:43] 2025-06-06 17:04:29,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:04:43] 2025-06-06 17:04:31,205 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 13:04:43] 2025-06-06 17:04:31,206 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669902437/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:04:43] 2025-06-06 17:04:31,207 | INFO     | extracted standard info from prmon json
[2025-06-06 13:04:43] 2025-06-06 17:04:31,207 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:04:43] 2025-06-06 17:04:31,207 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:04:43] 2025-06-06 17:04:31,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:04:43] 2025-06-06 17:04:31,208 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:04:43] 2025-06-06 17:04:31,210 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:04:43] 2025-06-06 17:04:31,210 | INFO     | sum of square deviations: 77515872.0
[2025-06-06 13:04:43] 2025-06-06 17:04:31,211 | INFO     | sum of deviations: -7143729520.000001
[2025-06-06 13:04:43] 2025-06-06 17:04:31,211 | INFO     | mean x: 1749227392.0
[2025-06-06 13:04:43] 2025-06-06 17:04:31,211 | INFO     | mean y: 2637485.619047619
[2025-06-06 13:04:43] 2025-06-06 17:04:31,211 | INFO     | -- intersect: 161208427151.80527
[2025-06-06 13:04:43] 2025-06-06 17:04:31,211 | INFO     | intersect: 161208427151.80527
[2025-06-06 13:04:43] 2025-06-06 17:04:31,211 | INFO     | chi2: 0.061884491897657774
[2025-06-06 13:04:43] 2025-06-06 17:04:31,212 | INFO     | -- intersect: 161208427151.80527
[2025-06-06 13:04:43] 2025-06-06 17:04:31,212 | INFO     | current memory leak: -92.16 B/s (using 63 data points, chi2=0.06)
[2025-06-06 13:04:43] 2025-06-06 17:04:31,212 | INFO     | ..............................
[2025-06-06 13:04:43] 2025-06-06 17:04:31,212 | INFO     | . Timing measurements:
[2025-06-06 13:04:43] 2025-06-06 17:04:31,212 | INFO     | . get job = 0 s
[2025-06-06 13:04:43] 2025-06-06 17:04:31,213 | INFO     | . initial setup = 2 s
[2025-06-06 13:04:43] 2025-06-06 17:04:31,213 | INFO     | . payload setup = 8 s
[2025-06-06 13:04:43] 2025-06-06 17:04:31,213 | INFO     | . stage-in = 0 s
[2025-06-06 13:04:43] 2025-06-06 17:04:31,213 | INFO     | . payload execution = 4263 s
[2025-06-06 13:04:43] 2025-06-06 17:04:31,213 | INFO     | . stage-out = 0 s
[2025-06-06 13:04:43] 2025-06-06 17:04:31,213 | INFO     | . log creation = 0 s
[2025-06-06 13:04:43] 2025-06-06 17:04:31,213 | INFO     | ..............................
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | 
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | job summary report
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | --------------------------------------------------
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | PanDA job id: 6669902437
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | task id: 44871837
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | errors: (none)
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | pilot state: finished 
[2025-06-06 13:04:43] 2025-06-06 17:04:31,475 | INFO     | transexitcode: 0
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | exeerrorcode: 0
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | exeerrordiag: 
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | exitcode: 0
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | exitmsg: OK
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | cpuconsumptiontime: 31845 s
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | nevents: 400
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | neventsw: 0
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | pid: 12415
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | pgrp: 12415
[2025-06-06 13:04:43] 2025-06-06 17:04:31,476 | INFO     | corecount: 8
[2025-06-06 13:04:43] 2025-06-06 17:04:31,477 | INFO     | event service: False
[2025-06-06 13:04:43] 2025-06-06 17:04:31,477 | INFO     | sizes: {0: 2396514, 1: 2397370, 5: 2397576, 12: 2397632, 4275: 2423686, 4276: 2423685, 4278: 2432866, 4286: 2432980}
[2025-06-06 13:04:43] 2025-06-06 17:04:31,477 | INFO     | --------------------------------------------------
[2025-06-06 13:04:43] 2025-06-06 17:04:31,477 | INFO     | 
[2025-06-06 13:04:43] 2025-06-06 17:04:31,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 13:04:43] 2025-06-06 17:04:31,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:04:43] 2025-06-06 17:04:31,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:04:43] 2025-06-06 17:04:31,501 | INFO     | job 6669902437 has completed (purged errors)
[2025-06-06 13:04:43] 2025-06-06 17:04:31,501 | INFO     | overall cleanup function is called
[2025-06-06 13:04:43] 2025-06-06 17:04:32,509 | INFO     | --- collectZombieJob: --- 10, [12415]
[2025-06-06 13:04:43] 2025-06-06 17:04:32,510 | INFO     | zombie collector waiting for pid 12415
[2025-06-06 13:04:43] 2025-06-06 17:04:32,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:04:43] 2025-06-06 17:04:32,510 | INFO     | collected zombie processes
[2025-06-06 13:04:43] 2025-06-06 17:04:32,510 | INFO     | will attempt to kill all subprocesses of pid=12415
[2025-06-06 13:04:43] 2025-06-06 17:04:32,605 | INFO     | process IDs to be killed: [12415] (in reverse order)
[2025-06-06 13:04:43] 2025-06-06 17:04:32,643 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:04:43] 2025-06-06 17:04:32,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:04:43] 2025-06-06 17:04:32,645 | INFO     | did not find any defunct processes belonging to 12415
[2025-06-06 13:04:43] 2025-06-06 17:04:32,647 | INFO     | did not find any defunct processes belonging to 12415
[2025-06-06 13:04:43] 2025-06-06 17:04:32,648 | INFO     | ready for new job
[2025-06-06 13:04:43] 2025-06-06 17:04:32,648 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:04:43] 2025-06-06 17:04:32,649 | INFO     | **************************************
[2025-06-06 13:04:43] 2025-06-06 17:04:32,650 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:04:43] 2025-06-06 17:04:32,650 | INFO     | **************************************
[2025-06-06 13:04:43] 2025-06-06 17:04:32,650 | INFO     | 
[2025-06-06 13:04:43] 2025-06-06 17:04:32,651 | INFO     | architecture information:
[2025-06-06 13:04:43] 2025-06-06 17:04:32,651 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:04:43] 2025-06-06 17:04:32,664 | INFO     | cat /etc/os-release:
[2025-06-06 13:04:43] NAME="CentOS Linux"
[2025-06-06 13:04:43] VERSION="7 (Core)"
[2025-06-06 13:04:43] ID="centos"
[2025-06-06 13:04:43] ID_LIKE="rhel fedora"
[2025-06-06 13:04:43] VERSION_ID="7"
[2025-06-06 13:04:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:04:43] ANSI_COLOR="0;31"
[2025-06-06 13:04:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:04:43] HOME_URL="https://www.centos.org/"
[2025-06-06 13:04:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:04:43] 
[2025-06-06 13:04:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:04:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:04:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:04:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:04:43] 
[2025-06-06 13:04:43] 2025-06-06 17:04:32,664 | INFO     | **************************************
[2025-06-06 13:04:43] 2025-06-06 17:04:33,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 13:04:43] 2025-06-06 17:04:33,183 | INFO     | sufficient remaining disk space (33287045120 B)
[2025-06-06 13:04:43] 2025-06-06 17:04:33,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:04:43] 2025-06-06 17:04:33,183 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:04:43] 2025-06-06 17:04:33,183 | INFO     | update_server=False
[2025-06-06 13:04:43] 2025-06-06 17:04:33,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:04:43] 2025-06-06 17:04:33,184 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:04:43] 2025-06-06 17:04:33,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:04:43] 2025-06-06 17:04:33,451 | INFO     | aborting loop
[2025-06-06 13:04:43] 2025-06-06 17:04:33,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:04:43] 2025-06-06 17:04:33,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:04:43] 2025-06-06 17:04:34,040 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:04:43] 2025-06-06 17:04:34,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:04:43] 2025-06-06 17:04:34,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:04:43] 2025-06-06 17:04:34,101 | INFO     | all data control threads have been joined
[2025-06-06 13:04:43] 2025-06-06 17:04:34,101 | INFO     | all job control threads have been joined
[2025-06-06 13:04:43] 2025-06-06 17:04:34,189 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:34,189 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:34,229 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:34,268 | INFO     | all payload control threads have been joined
[2025-06-06 13:04:43] 2025-06-06 17:04:34,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:34,346 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:34,367 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:34,406 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:34,456 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:34,951 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:35,106 | INFO     | [data] control thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:35,106 | INFO     | [job] control thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:35,107 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:35,273 | INFO     | [payload] control thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:35,443 | INFO     | [job] validate thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:35,797 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:37,869 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:04:43] 2025-06-06 17:04:38,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635529770816)>', '<ExcThread(monitor, started 140635231196928)>']
[2025-06-06 13:04:43] 2025-06-06 17:04:39,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:04:43] 2025-06-06 17:04:39,066 | INFO     | [monitor] control thread has ended
[2025-06-06 13:04:43] 2025-06-06 17:04:43,661 | INFO     | all workflow threads have been joined
[2025-06-06 13:04:43] 2025-06-06 17:04:43,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:04:43] 2025-06-06 17:04:43,661 | INFO     | traces error code: 0
[2025-06-06 13:04:43] 2025-06-06 17:04:43,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:04:43] 2025-06-06 17:04:43,751 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:04:43] 2025-06-06 17:04:43,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:04:43] 2025-06-06 17:04:43,759 [wrapper] pilotpid: 5951
[2025-06-06 13:04:43] 2025-06-06 17:04:43,762 [wrapper] Pilot exit status: 0
[2025-06-06 13:04:43] 2025-06-06 17:04:43,774 [wrapper] pandaids: 6669902437
[2025-06-06 13:04:43] 2025-06-06 17:04:43,808 [wrapper] cleanup supervisor_pilot  1455 5952
[2025-06-06 13:04:43] 2025-06-06 17:04:43,812 [wrapper] Test setup, not cleaning
[2025-06-06 13:04:43] 2025-06-06 17:04:43,815 [wrapper] apfmon messages muted
[2025-06-06 13:04:43] 2025-06-06 17:04:43,819 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:04:43] 2025-06-06 17:04:43,822 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:04:43]  *** Error codes and diagnostics ***
[2025-06-06 13:04:43]     "exeErrorCode": 0,
[2025-06-06 13:04:43]     "exeErrorDiag": "",
[2025-06-06 13:04:43]     "pilotErrorCode": 0,
[2025-06-06 13:04:43]     "pilotErrorDiag": "",
[2025-06-06 13:04:43]  *** Listing of results directory ***
[2025-06-06 13:04:43] total 421468
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas    495897 May 29 05:21 pilot3.tar.gz
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas      5111 May 29 05:25 queuedata.json
[2025-06-06 13:04:43] -rwx------ 1 boincer umatlas     37140 May 29 05:27 runpilot2-wrapper.sh
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas       100 Jun  6 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:04:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 11:52 run_atlas
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas       105 Jun  6 11:52 job.xml
[2025-06-06 13:04:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 11:52 start_atlas.sh
[2025-06-06 13:04:43] drwxrwx--x 2 boincer umatlas      4096 Jun  6 11:52 shared
[2025-06-06 13:04:43] -rw-r--r-- 2 boincer umatlas    508878 Jun  6 11:52 input.tar.gz
[2025-06-06 13:04:43] -rw-r--r-- 2 boincer umatlas 226626191 Jun  6 11:52 EVNT.44871834._001936.pool.root.1
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas         0 Jun  6 11:52 boinc_lockfile
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas      2559 Jun  6 11:52 pandaJob.out
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas    985740 Jun  6 11:52 agis_schedconf.cvmfs.json
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas   1598969 Jun  6 11:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:04:43] drwx------ 4 boincer umatlas      4096 Jun  6 11:52 pilot3
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas 199679204 Jun  6 13:03 HITS.44871837._098266.pool.root.1
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas       530 Jun  6 13:04 boinc_task_state.xml
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas      6051 Jun  6 13:04 init_data.xml
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas      1041 Jun  6 13:04 memory_monitor_summary.json
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas        95 Jun  6 13:04 pilot_heartbeat.json
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas    304461 Jun  6 13:04 log.44871837._098266.job.log.tgz.1
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas      7737 Jun  6 13:04 heartbeat.json
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas        27 Jun  6 13:04 wrapper_checkpoint.txt
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 13:04 boinc_mmap_file
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas      4353 Jun  6 13:04 pilotlog.txt
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas    420304 Jun  6 13:04 log.44871837._098266.job.log.1
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas       357 Jun  6 13:04 output.list
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas       620 Jun  6 13:04 runtime_log
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas    747520 Jun  6 13:04 result.tar.gz
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas      8659 Jun  6 13:04 runtime_log.err
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas       656 Jun  6 13:04 F7LKDmwioe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWGeKDmbF44Nn.diag
[2025-06-06 13:04:43] -rw-r--r-- 1 boincer umatlas     21390 Jun  6 13:04 stderr.txt
[2025-06-06 13:04:43] HITS file was successfully produced:
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas 199679204 Jun  6 13:03 shared/HITS.pool.root.1
[2025-06-06 13:04:43]  *** Contents of shared directory: ***
[2025-06-06 13:04:43] total 417564
[2025-06-06 13:04:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 11:52 start_atlas.sh
[2025-06-06 13:04:43] -rw-r--r-- 2 boincer umatlas    508878 Jun  6 11:52 input.tar.gz
[2025-06-06 13:04:43] -rw-r--r-- 2 boincer umatlas 226626191 Jun  6 11:52 ATLAS.root_0
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas 199679204 Jun  6 13:03 HITS.pool.root.1
[2025-06-06 13:04:43] -rw------- 1 boincer umatlas    747520 Jun  6 13:04 result.tar.gz
13:04:44 (2256): run_atlas exited; CPU time 31746.266777
13:04:44 (2256): called boinc_finish(0)

</stderr_txt>
]]>

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