Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:04 (3541): wrapper (7.7.26015): starting
11:32:04 (3541): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 11:32:04] Arguments: --nthreads 10
[2025-06-06 11:32:04] Threads: 10
[2025-06-06 11:32:04] Checking for CVMFS
[2025-06-06 11:32:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:32:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:32:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:32:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:32:09] 2.11.2.0 30725 106751 251156 146867 0 264 11424971 18432001 22178 130560 0 472958486 99.134 910391069 36558 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 11:32:09] CVMFS is ok
[2025-06-06 11:32:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:32:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 11:32:09] Further information can be found at the LHC@home message board.
[2025-06-06 11:32:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:32:09] Checking for apptainer binary...
[2025-06-06 11:32:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 11:32:09] Running /usr/bin/apptainer --version
[2025-06-06 11:32:09] apptainer version 1.3.2-1.el7
[2025-06-06 11:32:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:33:05] c-210-28.aglt2.org
[2025-06-06 11:33:05] apptainer works
[2025-06-06 11:33:05] Set ATHENA_PROC_NUMBER=10
[2025-06-06 11:33:05] Set ATHENA_CORE_NUMBER=10
[2025-06-06 11:33:06] Starting ATLAS job with PandaID=6682271053
[2025-06-06 11:33:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 20:48:30]  *** The last 200 lines of the pilot log: ***
[2025-06-06 20:48:30] 2025-06-07 00:47:53,707 | INFO     | intersect: -24755247254.78269
[2025-06-06 20:48:30] 2025-06-07 00:47:53,708 | INFO     | chi2: 10.355852552723338
[2025-06-06 20:48:30] 2025-06-07 00:47:53,708 | INFO     | current chi2=10.355852552723338 (change=35.0933235443837 %)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,710 | INFO     | sum of square deviations: 44358178016.77249
[2025-06-06 20:48:30] 2025-06-07 00:47:53,721 | INFO     | sum of deviations: 472099080129.9029
[2025-06-06 20:48:30] 2025-06-07 00:47:53,722 | INFO     | mean x: 1749241245.6634798
[2025-06-06 20:48:30] 2025-06-07 00:47:53,722 | INFO     | mean y: 2520549.141491396
[2025-06-06 20:48:30] 2025-06-07 00:47:53,722 | INFO     | -- intersect: -18614456520.808525
[2025-06-06 20:48:30] 2025-06-07 00:47:53,722 | INFO     | intersect: -18614456520.808525
[2025-06-06 20:48:30] 2025-06-07 00:47:53,723 | INFO     | chi2: 6.354864092049586
[2025-06-06 20:48:30] 2025-06-07 00:47:53,723 | INFO     | current chi2=6.354864092049586 (change=38.6350466106394 %)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,724 | INFO     | sum of square deviations: 43097977886.38804
[2025-06-06 20:48:30] 2025-06-07 00:47:53,731 | INFO     | sum of deviations: 321794471016.3896
[2025-06-06 20:48:30] 2025-06-07 00:47:53,731 | INFO     | mean x: 1749241398.1679537
[2025-06-06 20:48:30] 2025-06-07 00:47:53,731 | INFO     | mean y: 2538732.9150579153
[2025-06-06 20:48:30] 2025-06-07 00:47:53,731 | INFO     | -- intersect: -13058310940.526587
[2025-06-06 20:48:30] 2025-06-07 00:47:53,731 | INFO     | intersect: -13058310940.526587
[2025-06-06 20:48:30] 2025-06-07 00:47:53,732 | INFO     | chi2: 3.491108830657685
[2025-06-06 20:48:30] 2025-06-07 00:47:53,732 | INFO     | current chi2=3.491108830657685 (change=45.06398909419125 %)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,733 | INFO     | sum of square deviations: 41861902829.32546
[2025-06-06 20:48:30] 2025-06-07 00:47:53,741 | INFO     | sum of deviations: 202671041849.0546
[2025-06-06 20:48:30] 2025-06-07 00:47:53,741 | INFO     | mean x: 1749241550.6705654
[2025-06-06 20:48:30] 2025-06-07 00:47:53,741 | INFO     | mean y: 2553423.6393762184
[2025-06-06 20:48:30] 2025-06-07 00:47:53,741 | INFO     | -- intersect: -8466259113.752198
[2025-06-06 20:48:30] 2025-06-07 00:47:53,742 | INFO     | intersect: -8466259113.752198
[2025-06-06 20:48:30] 2025-06-07 00:47:53,742 | INFO     | chi2: 1.7512767664100382
[2025-06-06 20:48:30] 2025-06-07 00:47:53,742 | INFO     | current chi2=1.7512767664100382 (change=49.83608786323291 %)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,743 | INFO     | sum of square deviations: 40649688806.75567
[2025-06-06 20:48:30] 2025-06-07 00:47:53,753 | INFO     | sum of deviations: 142167972719.62997
[2025-06-06 20:48:30] 2025-06-07 00:47:53,754 | INFO     | mean x: 1749241703.1732283
[2025-06-06 20:48:30] 2025-06-07 00:47:53,754 | INFO     | mean y: 2561024.061023622
[2025-06-06 20:48:30] 2025-06-07 00:47:53,754 | INFO     | -- intersect: -6115226197.3614645
[2025-06-06 20:48:30] 2025-06-07 00:47:53,754 | INFO     | intersect: -6115226197.3614645
[2025-06-06 20:48:30] 2025-06-07 00:47:53,755 | INFO     | chi2: 1.2947465216917282
[2025-06-06 20:48:30] 2025-06-07 00:47:53,755 | INFO     | current chi2=1.2947465216917282 (change=26.068423533885877 %)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,756 | INFO     | sum of square deviations: 39461103134.17892
[2025-06-06 20:48:30] 2025-06-07 00:47:53,762 | INFO     | sum of deviations: 105963233117.54071
[2025-06-06 20:48:30] 2025-06-07 00:47:53,763 | INFO     | mean x: 1749241855.6759443
[2025-06-06 20:48:30] 2025-06-07 00:47:53,763 | INFO     | mean y: 2565665.598409543
[2025-06-06 20:48:30] 2025-06-07 00:47:53,763 | INFO     | -- intersect: -4694599588.54284
[2025-06-06 20:48:30] 2025-06-07 00:47:53,763 | INFO     | intersect: -4694599588.54284
[2025-06-06 20:48:30] 2025-06-07 00:47:53,764 | INFO     | chi2: 1.1505778436160345
[2025-06-06 20:48:30] 2025-06-07 00:47:53,764 | INFO     | current chi2=1.1505778436160345 (change=11.134895955335065 %)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,764 | INFO     | left removable region: 60
[2025-06-06 20:48:30] 2025-06-07 00:47:53,765 | INFO     | sum of square deviations: 31580416915.803062
[2025-06-06 20:48:30] 2025-06-07 00:47:53,771 | INFO     | sum of deviations: 31647015589.160603
[2025-06-06 20:48:30] 2025-06-07 00:47:53,771 | INFO     | mean x: 1749242587.653105
[2025-06-06 20:48:30] 2025-06-07 00:47:53,771 | INFO     | mean y: 2584667.130620985
[2025-06-06 20:48:30] 2025-06-07 00:47:53,771 | INFO     | -- intersect: -1750346827.987791
[2025-06-06 20:48:30] 2025-06-07 00:47:53,771 | INFO     | intersect: -1750346827.987791
[2025-06-06 20:48:30] 2025-06-07 00:47:53,772 | INFO     | chi2: 0.005925930309947314
[2025-06-06 20:48:30] 2025-06-07 00:47:53,772 | INFO     | -- intersect: -1750346827.987791
[2025-06-06 20:48:30] 2025-06-07 00:47:53,773 | INFO     | current memory leak: 1.00 B/s (using 467 data points, chi2=0.01)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,773 | INFO     | could have reported an average CPU frequency of 2599 MHz (21 samples)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,774 | INFO     | ..............................
[2025-06-06 20:48:30] 2025-06-07 00:47:53,774 | INFO     | . Timing measurements:
[2025-06-06 20:48:30] 2025-06-07 00:47:53,774 | INFO     | . get job = 2 s
[2025-06-06 20:48:30] 2025-06-07 00:47:53,774 | INFO     | . initial setup = 13 s
[2025-06-06 20:48:30] 2025-06-07 00:47:53,774 | INFO     | . payload setup = 216 s
[2025-06-06 20:48:30] 2025-06-07 00:47:53,774 | INFO     | . stage-in = 1 s
[2025-06-06 20:48:30] 2025-06-07 00:47:53,774 | INFO     | . payload execution = 32631 s
[2025-06-06 20:48:30] 2025-06-07 00:47:53,774 | INFO     | . stage-out = 3 s
[2025-06-06 20:48:30] 2025-06-07 00:47:53,775 | INFO     | . log creation = 0 s
[2025-06-06 20:48:30] 2025-06-07 00:47:53,775 | INFO     | ..............................
[2025-06-06 20:48:30] 2025-06-07 00:47:53,957 | INFO     | 
[2025-06-06 20:48:30] 2025-06-07 00:47:53,961 | INFO     | job summary report
[2025-06-06 20:48:30] 2025-06-07 00:47:53,961 | INFO     | --------------------------------------------------
[2025-06-06 20:48:30] 2025-06-07 00:47:53,963 | INFO     | PanDA job id: 6682271053
[2025-06-06 20:48:30] 2025-06-07 00:47:53,966 | INFO     | task id: 44871837
[2025-06-06 20:48:30] 2025-06-07 00:47:53,966 | INFO     | errors: (none)
[2025-06-06 20:48:30] 2025-06-07 00:47:53,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 20:48:30] 2025-06-07 00:47:53,970 | INFO     | pilot state: finished 
[2025-06-06 20:48:30] 2025-06-07 00:47:53,970 | INFO     | transexitcode: 0
[2025-06-06 20:48:30] 2025-06-07 00:47:53,970 | INFO     | exeerrorcode: 0
[2025-06-06 20:48:30] 2025-06-07 00:47:53,970 | INFO     | exeerrordiag: 
[2025-06-06 20:48:30] 2025-06-07 00:47:53,971 | INFO     | exitcode: 0
[2025-06-06 20:48:30] 2025-06-07 00:47:53,971 | INFO     | exitmsg: OK
[2025-06-06 20:48:30] 2025-06-07 00:47:53,971 | INFO     | cpuconsumptiontime: 70539 s
[2025-06-06 20:48:30] 2025-06-07 00:47:53,971 | INFO     | nevents: 400
[2025-06-06 20:48:30] 2025-06-07 00:47:53,971 | INFO     | neventsw: 0
[2025-06-06 20:48:30] 2025-06-07 00:47:53,971 | INFO     | pid: 8198
[2025-06-06 20:48:30] 2025-06-07 00:47:53,972 | INFO     | pgrp: 8198
[2025-06-06 20:48:30] 2025-06-07 00:47:53,973 | INFO     | corecount: 10
[2025-06-06 20:48:30] 2025-06-07 00:47:53,973 | INFO     | event service: False
[2025-06-06 20:48:30] 2025-06-07 00:47:53,973 | INFO     | sizes: {0: 2396854, 1: 2397539, 2: 2397539, 3: 2397766, 15: 2397766, 26: 2397794, 36: 2397950, 48: 2397978, 59: 2398006, 71: 2398034, 83: 2398062, 88: 2398660, 94:
[2025-06-06 20:48:30] 2025-06-07 00:47:53,973 | INFO     | --------------------------------------------------
[2025-06-06 20:48:30] 2025-06-07 00:47:53,973 | INFO     | 
[2025-06-06 20:48:30] 2025-06-07 00:47:53,973 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-06 20:48:30] 2025-06-07 00:47:54,339 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,339 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,339 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,340 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,341 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 20:48:30] 2025-06-07 00:47:54,342 | INFO     | job 6682271053 has completed (purged errors)
[2025-06-06 20:48:30] 2025-06-07 00:47:54,342 | INFO     | overall cleanup function is called
[2025-06-06 20:48:30] 2025-06-07 00:47:55,349 | INFO     | --- collectZombieJob: --- 10, [8198]
[2025-06-06 20:48:30] 2025-06-07 00:47:55,357 | INFO     | zombie collector waiting for pid 8198
[2025-06-06 20:48:30] 2025-06-07 00:47:55,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 20:48:30] 2025-06-07 00:47:55,357 | INFO     | collected zombie processes
[2025-06-06 20:48:30] 2025-06-07 00:47:55,357 | INFO     | will attempt to kill all subprocesses of pid=8198
[2025-06-06 20:48:30] 2025-06-07 00:47:56,304 | INFO     | process IDs to be killed: [8198] (in reverse order)
[2025-06-06 20:48:30] 2025-06-07 00:47:56,424 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 20:48:30] 2025-06-07 00:47:56,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 20:48:30] 2025-06-07 00:47:56,434 | INFO     | did not find any defunct processes belonging to 8198
[2025-06-06 20:48:30] 2025-06-07 00:47:56,444 | INFO     | did not find any defunct processes belonging to 8198
[2025-06-06 20:48:30] 2025-06-07 00:47:56,444 | INFO     | ready for new job
[2025-06-06 20:48:30] 2025-06-07 00:47:56,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 20:48:30] 2025-06-07 00:47:56,447 | INFO     | ***************************************
[2025-06-06 20:48:30] 2025-06-07 00:47:56,447 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 20:48:30] 2025-06-07 00:47:56,447 | INFO     | ***************************************
[2025-06-06 20:48:30] 2025-06-07 00:47:56,448 | INFO     | 
[2025-06-06 20:48:30] 2025-06-07 00:47:56,450 | INFO     | architecture information:
[2025-06-06 20:48:30] 2025-06-07 00:47:56,451 | INFO     | executing command: cat /etc/os-release
[2025-06-06 20:48:30] 2025-06-07 00:47:56,473 | INFO     | cat /etc/os-release:
[2025-06-06 20:48:30] NAME="CentOS Linux"
[2025-06-06 20:48:30] VERSION="7 (Core)"
[2025-06-06 20:48:30] ID="centos"
[2025-06-06 20:48:30] ID_LIKE="rhel fedora"
[2025-06-06 20:48:30] VERSION_ID="7"
[2025-06-06 20:48:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 20:48:30] ANSI_COLOR="0;31"
[2025-06-06 20:48:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 20:48:30] HOME_URL="https://www.centos.org/"
[2025-06-06 20:48:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 20:48:30] 
[2025-06-06 20:48:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 20:48:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 20:48:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 20:48:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 20:48:30] 
[2025-06-06 20:48:30] 2025-06-07 00:47:56,473 | INFO     | ***************************************
[2025-06-06 20:48:30] 2025-06-07 00:47:56,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-06 20:48:30] 2025-06-07 00:47:57,087 | INFO     | sufficient remaining disk space (57585696768 B)
[2025-06-06 20:48:30] 2025-06-07 00:47:57,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 20:48:30] 2025-06-07 00:47:57,088 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 20:48:30] 2025-06-07 00:47:57,088 | INFO     | update_server=False
[2025-06-06 20:48:30] 2025-06-07 00:47:57,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 20:48:30] 2025-06-07 00:47:57,347 | INFO     | all data control threads have been joined
[2025-06-06 20:48:30] 2025-06-07 00:47:57,372 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 20:48:30] 2025-06-07 00:47:57,373 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 20:48:30] 2025-06-07 00:47:57,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:48:30] 2025-06-07 00:47:57,373 | INFO     | will abort loop
[2025-06-06 20:48:30] 2025-06-07 00:47:57,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 20:48:30] 2025-06-07 00:47:57,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 20:48:30] 2025-06-07 00:47:57,970 | INFO     | all payload control threads have been joined
[2025-06-06 20:48:30] 2025-06-07 00:47:58,094 | INFO     | [job] retrieve thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,224 | INFO     | [payload] failed_post thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,345 | INFO     | [payload] validate_post thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,356 | INFO     | [data] control thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,380 | INFO     | [job] job monitor thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,454 | INFO     | all job control threads have been joined
[2025-06-06 20:48:30] 2025-06-07 00:47:58,494 | INFO     | [job] validate thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,502 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,502 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,521 | INFO     | [data] copytool_in thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:58,976 | INFO     | [payload] control thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:59,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:48:30] 2025-06-07 00:47:59,362 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:59,460 | INFO     | [job] control thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:47:59,575 | INFO     | [data] copytool_out thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:48:00,034 | INFO     | [job] queue monitor thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:48:01,750 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 20:48:30] 2025-06-07 00:48:02,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756268128064)>', '<ExcThread(monitor, started 139755601778432)>']
[2025-06-06 20:48:30] 2025-06-07 00:48:07,602 | INFO     | all workflow threads have been joined
[2025-06-06 20:48:30] 2025-06-07 00:48:07,606 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 20:48:30] 2025-06-07 00:48:07,607 | INFO     | traces error code: 0
[2025-06-06 20:48:30] 2025-06-07 00:48:07,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 20:48:30] 2025-06-07 00:48:28,009 | INFO     | PID=16760 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 20:48:30] 2025-06-07 00:48:28,009 | INFO     | .. there are 27 such processes running
[2025-06-06 20:48:30] 2025-06-07 00:48:28,010 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 20:48:30] 2025-06-07 00:48:28,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 20:48:30] 2025-06-07 00:48:28,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 20:48:30] 2025-06-07 00:48:28,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 20:48:30] 2025-06-07 00:48:28,011 | INFO     | [monitor] control thread has ended
[2025-06-06 20:48:30] 2025-06-07 00:48:28,430 [wrapper] ==== pilot stdout END ====
[2025-06-06 20:48:30] 2025-06-07 00:48:28,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 20:48:30] 2025-06-07 00:48:28,517 [wrapper] pilotpid: 16760
[2025-06-06 20:48:30] 2025-06-07 00:48:28,548 [wrapper] Pilot exit status: 0
[2025-06-06 20:48:30] 2025-06-07 00:48:28,725 [wrapper] pandaids: 6682271053
[2025-06-06 20:48:30] 2025-06-07 00:48:29,336 [wrapper] cleanup supervisor_pilot 20970 16761
[2025-06-06 20:48:30] 2025-06-07 00:48:29,341 [wrapper] Test setup, not cleaning
[2025-06-06 20:48:30] 2025-06-07 00:48:29,348 [wrapper] apfmon messages muted
[2025-06-06 20:48:30] 2025-06-07 00:48:29,358 [wrapper] ==== wrapper stdout END ====
[2025-06-06 20:48:30] 2025-06-07 00:48:29,368 [wrapper] ==== wrapper stderr END ====
[2025-06-06 20:48:30]  *** Error codes and diagnostics ***
[2025-06-06 20:48:30]     "exeErrorCode": 0,
[2025-06-06 20:48:30]     "exeErrorDiag": "",
[2025-06-06 20:48:30]     "pilotErrorCode": 0,
[2025-06-06 20:48:30]     "pilotErrorDiag": "",
[2025-06-06 20:48:30]  *** Listing of results directory ***
[2025-06-06 20:48:30] total 421484
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas    529402 Jun  6 11:12 pilot3.tar.gz
[2025-06-06 20:48:30] -rwx------ 1 boincer umatlas     37140 Jun  6 11:31 runpilot2-wrapper.sh
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas      5112 Jun  6 11:31 queuedata.json
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas       100 Jun  6 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 20:48:30] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 11:32 run_atlas
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas       105 Jun  6 11:32 job.xml
[2025-06-06 20:48:30] -rw-r--r-- 2 boincer umatlas 223129982 Jun  6 11:32 EVNT.44871834._001757.pool.root.1
[2025-06-06 20:48:30] -rw-r--r-- 2 boincer umatlas     15095 Jun  6 11:32 start_atlas.sh
[2025-06-06 20:48:30] drwxrwx--x 2 boincer umatlas      4096 Jun  6 11:32 shared
[2025-06-06 20:48:30] -rw-r--r-- 2 boincer umatlas    541904 Jun  6 11:32 input.tar.gz
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas         0 Jun  6 11:32 boinc_lockfile
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas      2558 Jun  6 11:33 pandaJob.out
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas    985740 Jun  6 11:36 agis_schedconf.cvmfs.json
[2025-06-06 20:48:30] drwx------ 4 boincer umatlas      4096 Jun  6 11:36 pilot3
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas 198325980 Jun  6 20:45 HITS.44871837._102346.pool.root.1
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas       531 Jun  6 20:45 boinc_task_state.xml
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas      6229 Jun  6 20:46 init_data.xml
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas      1062 Jun  6 20:47 memory_monitor_summary.json
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas   1598969 Jun  6 20:47 agis_ddmendpoints.agis.ALL.json
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas    586655 Jun  6 20:47 log.44871837._102346.job.log.tgz.1
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas      7792 Jun  6 20:47 heartbeat.json
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 20:48 boinc_mmap_file
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas        28 Jun  6 20:48 wrapper_checkpoint.txt
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas        95 Jun  6 20:48 pilot_heartbeat.json
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas       821 Jun  6 20:48 pilotlog.txt
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas   2540738 Jun  6 20:48 log.44871837._102346.job.log.1
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas       357 Jun  6 20:48 output.list
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas       620 Jun  6 20:48 runtime_log
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas   3143680 Jun  6 20:48 result.tar.gz
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas      8663 Jun  6 20:48 runtime_log.err
[2025-06-06 20:48:30] -rw------- 1 boincer umatlas       664 Jun  6 20:48 7sRLDmaDoh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm86nKDmFIWMqn.diag
[2025-06-06 20:48:30] -rw-r--r-- 1 boincer umatlas     20348 Jun  6 20:48 stderr.txt
[2025-06-06 20:48:31] HITS file was successfully produced:
[2025-06-06 20:48:31] -rw------- 1 boincer umatlas 198325980 Jun  6 20:45 shared/HITS.pool.root.1
[2025-06-06 20:48:31]  *** Contents of shared directory: ***
[2025-06-06 20:48:31] total 415208
[2025-06-06 20:48:31] -rw-r--r-- 2 boincer umatlas 223129982 Jun  6 11:32 ATLAS.root_0
[2025-06-06 20:48:31] -rw-r--r-- 2 boincer umatlas     15095 Jun  6 11:32 start_atlas.sh
[2025-06-06 20:48:31] -rw-r--r-- 2 boincer umatlas    541904 Jun  6 11:32 input.tar.gz
[2025-06-06 20:48:31] -rw------- 1 boincer umatlas 198325980 Jun  6 20:45 HITS.pool.root.1
[2025-06-06 20:48:31] -rw------- 1 boincer umatlas   3143680 Jun  6 20:48 result.tar.gz
20:48:32 (3541): run_atlas exited; CPU time 71418.311715
20:48:32 (3541): called boinc_finish(0)

</stderr_txt>
]]>

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