Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:31:08 (2674194): wrapper (7.7.26015): starting
11:31:08 (2674194): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 11:31:08] Arguments: --nthreads 8
[2025-06-06 11:31:08] Threads: 8
[2025-06-06 11:31:08] Checking for CVMFS
[2025-06-06 11:31:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:31:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:31:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:31:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:31:08] 2.12.6.0 1699072 26356 593180 146867 1 484 26249526 32935936 15646 16776704 0 135530471 99.685 103920547 28140 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 11:31:08] CVMFS is ok
[2025-06-06 11:31:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:31:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 11:31:08] Further information can be found at the LHC@home message board.
[2025-06-06 11:31:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:31:08] Checking for apptainer binary...
[2025-06-06 11:31:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 11:31:08] Running /usr/bin/apptainer --version
[2025-06-06 11:31:08] apptainer version 1.4.1-1.el9
[2025-06-06 11:31:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:31:08] c6-2-11-3.aglt2.org
[2025-06-06 11:31:08] apptainer works
[2025-06-06 11:31:08] Set ATHENA_PROC_NUMBER=8
[2025-06-06 11:31:08] Set ATHENA_CORE_NUMBER=8
[2025-06-06 11:31:08] Starting ATLAS job with PandaID=6669945371
[2025-06-06 11:31:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:14:57]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:14:57] 2025-06-06 17:14:44,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:14:57] 2025-06-06 17:14:44,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:14:57] 2025-06-06 17:14:44,704 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:14:57] 2025-06-06 17:14:44,704 | INFO     | sum of square deviations: 329031285.5
[2025-06-06 13:14:57] 2025-06-06 17:14:44,704 | INFO     | sum of deviations: -16900478677.5
[2025-06-06 13:14:57] 2025-06-06 17:14:44,704 | INFO     | mean x: 1749226984.5
[2025-06-06 13:14:57] 2025-06-06 17:14:44,704 | INFO     | mean y: 2312974.970588235
[2025-06-06 13:14:57] 2025-06-06 17:14:44,705 | INFO     | -- intersect: 89850223056.60892
[2025-06-06 13:14:57] 2025-06-06 17:14:44,705 | INFO     | intersect: 89850223056.60892
[2025-06-06 13:14:57] 2025-06-06 17:14:44,705 | INFO     | chi2: 2.414475518852231
[2025-06-06 13:14:57] 2025-06-06 17:14:44,705 | INFO     | sum of square deviations: 282974608.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,705 | INFO     | sum of deviations: -9179349845.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,705 | INFO     | mean x: 1749226832.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,706 | INFO     | mean y: 2337794.9278350514
[2025-06-06 13:14:57] 2025-06-06 17:14:44,706 | INFO     | -- intersect: 56745114691.676956
[2025-06-06 13:14:57] 2025-06-06 17:14:44,706 | INFO     | intersect: 56745114691.676956
[2025-06-06 13:14:57] 2025-06-06 17:14:44,706 | INFO     | chi2: 1.7748761070923593
[2025-06-06 13:14:57] 2025-06-06 17:14:44,706 | INFO     | current chi2=1.7748761070923593 (change=26.490200739907188 %)
[2025-06-06 13:14:57] 2025-06-06 17:14:44,706 | INFO     | sum of square deviations: 241429643.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,706 | INFO     | sum of deviations: -7645415968.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,707 | INFO     | mean x: 1749226679.5
[2025-06-06 13:14:57] 2025-06-06 17:14:44,707 | INFO     | mean y: 2343429.6739130435
[2025-06-06 13:14:57] 2025-06-06 17:14:44,707 | INFO     | -- intersect: 55395564497.81308
[2025-06-06 13:14:57] 2025-06-06 17:14:44,707 | INFO     | intersect: 55395564497.81308
[2025-06-06 13:14:57] 2025-06-06 17:14:44,707 | INFO     | chi2: 1.7763740761794702
[2025-06-06 13:14:57] 2025-06-06 17:14:44,707 | INFO     | current chi2=1.7763740761794702 (change=-0.08439851554286049 %)
[2025-06-06 13:14:57] 2025-06-06 17:14:44,707 | INFO     | right removable region: 91
[2025-06-06 13:14:57] 2025-06-06 17:14:44,707 | INFO     | sum of square deviations: 282974608.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,708 | INFO     | sum of deviations: -30739630082.000004
[2025-06-06 13:14:57] 2025-06-06 17:14:44,708 | INFO     | mean x: 1749227137.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,708 | INFO     | mean y: 2357812.3092783503
[2025-06-06 13:14:57] 2025-06-06 17:14:44,708 | INFO     | -- intersect: 190021510063.51035
[2025-06-06 13:14:57] 2025-06-06 17:14:44,708 | INFO     | intersect: 190021510063.51035
[2025-06-06 13:14:57] 2025-06-06 17:14:44,708 | INFO     | chi2: 0.8905031239697202
[2025-06-06 13:14:57] 2025-06-06 17:14:44,708 | INFO     | current chi2=0.8905031239697202 (change=63.118154770397574 %)
[2025-06-06 13:14:57] 2025-06-06 17:14:44,708 | INFO     | sum of square deviations: 241429643.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,709 | INFO     | sum of deviations: -29001426267.5
[2025-06-06 13:14:57] 2025-06-06 17:14:44,709 | INFO     | mean x: 1749227289.5
[2025-06-06 13:14:57] 2025-06-06 17:14:44,709 | INFO     | mean y: 2351189.6413043477
[2025-06-06 13:14:57] 2025-06-06 17:14:44,709 | INFO     | -- intersect: 210126036215.06766
[2025-06-06 13:14:57] 2025-06-06 17:14:44,709 | INFO     | intersect: 210126036215.06766
[2025-06-06 13:14:57] 2025-06-06 17:14:44,709 | INFO     | chi2: 0.8512808298397069
[2025-06-06 13:14:57] 2025-06-06 17:14:44,709 | INFO     | current chi2=0.8512808298397069 (change=4.404509436773969 %)
[2025-06-06 13:14:57] 2025-06-06 17:14:44,709 | INFO     | left removable region: 20
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | sum of square deviations: 110960220.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | sum of deviations: -13375431630.999996
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | mean x: 1749227259.0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | mean y: 2359377.0422535213
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | -- intersect: 210858733038.1257
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | intersect: 210858733038.1257
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | chi2: 0.14693776404886907
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | -- intersect: 210858733038.1257
[2025-06-06 13:14:57] 2025-06-06 17:14:44,710 | INFO     | current memory leak: -120.54 B/s (using 71 data points, chi2=0.15)
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | ..............................
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | . Timing measurements:
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | . get job = 0 s
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | . initial setup = 2 s
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | . payload setup = 6 s
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | . stage-in = 0 s
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | . payload execution = 6177 s
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | . stage-out = 0 s
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | . log creation = 0 s
[2025-06-06 13:14:57] 2025-06-06 17:14:44,711 | INFO     | ..............................
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | 
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | job summary report
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | --------------------------------------------------
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | PanDA job id: 6669945371
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | task id: 44871837
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | errors: (none)
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | pilot state: finished 
[2025-06-06 13:14:57] 2025-06-06 17:14:44,801 | INFO     | transexitcode: 0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | exeerrorcode: 0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | exeerrordiag: 
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | exitcode: 0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | exitmsg: OK
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | cpuconsumptiontime: 45972 s
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | nevents: 400
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | neventsw: 0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | pid: 2684349
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | pgrp: 2684349
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | corecount: 8
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | event service: False
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | sizes: {0: 2396508, 1: 2397364, 5: 2397570, 12: 2397626, 6188: 2424347, 6189: 2433472, 6192: 2433586}
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | --------------------------------------------------
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | 
[2025-06-06 13:14:57] 2025-06-06 17:14:44,802 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 13:14:57] 2025-06-06 17:14:44,818 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,818 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,818 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,818 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | job 6669945371 has completed (purged errors)
[2025-06-06 13:14:57] 2025-06-06 17:14:44,819 | INFO     | overall cleanup function is called
[2025-06-06 13:14:57] 2025-06-06 17:14:45,827 | INFO     | --- collectZombieJob: --- 10, [2684349]
[2025-06-06 13:14:57] 2025-06-06 17:14:45,827 | INFO     | zombie collector waiting for pid 2684349
[2025-06-06 13:14:57] 2025-06-06 17:14:45,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:14:57] 2025-06-06 17:14:45,827 | INFO     | collected zombie processes
[2025-06-06 13:14:57] 2025-06-06 17:14:45,827 | INFO     | will attempt to kill all subprocesses of pid=2684349
[2025-06-06 13:14:57] 2025-06-06 17:14:46,494 | INFO     | process IDs to be killed: [2684349] (in reverse order)
[2025-06-06 13:14:57] 2025-06-06 17:14:46,587 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:14:57] 2025-06-06 17:14:46,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:14:57] 2025-06-06 17:14:46,627 | INFO     | did not find any defunct processes belonging to 2684349
[2025-06-06 13:14:57] 2025-06-06 17:14:46,665 | INFO     | did not find any defunct processes belonging to 2684349
[2025-06-06 13:14:57] 2025-06-06 17:14:46,665 | INFO     | ready for new job
[2025-06-06 13:14:57] 2025-06-06 17:14:46,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:14:57] 2025-06-06 17:14:46,667 | INFO     | **************************************
[2025-06-06 13:14:57] 2025-06-06 17:14:46,667 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:14:57] 2025-06-06 17:14:46,667 | INFO     | **************************************
[2025-06-06 13:14:57] 2025-06-06 17:14:46,667 | INFO     | 
[2025-06-06 13:14:57] 2025-06-06 17:14:46,674 | INFO     | PID=2677853 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 13:14:57] 2025-06-06 17:14:46,674 | INFO     | .. there are 13 such processes running
[2025-06-06 13:14:57] 2025-06-06 17:14:46,684 | INFO     | architecture information:
[2025-06-06 13:14:57] 2025-06-06 17:14:46,685 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:14:57] 2025-06-06 17:14:46,700 | INFO     | cat /etc/os-release:
[2025-06-06 13:14:57] NAME="CentOS Linux"
[2025-06-06 13:14:57] VERSION="7 (Core)"
[2025-06-06 13:14:57] ID="centos"
[2025-06-06 13:14:57] ID_LIKE="rhel fedora"
[2025-06-06 13:14:57] VERSION_ID="7"
[2025-06-06 13:14:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:14:57] ANSI_COLOR="0;31"
[2025-06-06 13:14:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:14:57] HOME_URL="https://www.centos.org/"
[2025-06-06 13:14:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:14:57] 
[2025-06-06 13:14:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:14:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:14:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:14:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:14:57] 
[2025-06-06 13:14:57] 2025-06-06 17:14:46,701 | INFO     | **************************************
[2025-06-06 13:14:57] 2025-06-06 17:14:47,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 13:14:57] 2025-06-06 17:14:47,218 | INFO     | sufficient remaining disk space (76611059712 B)
[2025-06-06 13:14:57] 2025-06-06 17:14:47,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:14:57] 2025-06-06 17:14:47,219 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:14:57] 2025-06-06 17:14:47,219 | INFO     | update_server=False
[2025-06-06 13:14:57] 2025-06-06 17:14:47,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:14:57] 2025-06-06 17:14:47,219 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 13:14:57] 2025-06-06 17:14:47,220 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:14:57] 2025-06-06 17:14:47,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:14:57] 2025-06-06 17:14:47,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:14:57] 2025-06-06 17:14:47,223 | INFO     | all job control threads have been joined
[2025-06-06 13:14:57] 2025-06-06 17:14:47,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:14:57] 2025-06-06 17:14:47,300 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 13:14:57] 2025-06-06 17:14:47,300 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 13:14:57] 2025-06-06 17:14:47,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:14:57] 2025-06-06 17:14:47,301 | INFO     | will abort loop
[2025-06-06 13:14:57] 2025-06-06 17:14:47,402 | INFO     | all data control threads have been joined
[2025-06-06 13:14:57] 2025-06-06 17:14:47,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:14:57] 2025-06-06 17:14:48,225 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:48,228 | INFO     | [job] control thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:48,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:48,306 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:48,319 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:48,407 | INFO     | [data] control thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:48,593 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:48,643 | INFO     | all payload control threads have been joined
[2025-06-06 13:14:57] 2025-06-06 17:14:48,732 | INFO     | [job] validate thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:49,062 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:49,085 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:49,230 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:49,274 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:49,647 | INFO     | [payload] control thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:49,690 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:49,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:14:57] 2025-06-06 17:14:50,817 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:51,819 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:14:57] 2025-06-06 17:14:52,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333932652352)>', '<ExcThread(monitor, started 140333585245952)>']
[2025-06-06 13:14:57] 2025-06-06 17:14:52,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:14:57] 2025-06-06 17:14:52,246 | INFO     | [monitor] control thread has ended
[2025-06-06 13:14:57] 2025-06-06 17:14:57,184 | INFO     | all workflow threads have been joined
[2025-06-06 13:14:57] 2025-06-06 17:14:57,184 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:14:57] 2025-06-06 17:14:57,185 | INFO     | traces error code: 0
[2025-06-06 13:14:57] 2025-06-06 17:14:57,185 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:14:57] 2025-06-06 17:14:57,363 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:14:57] 2025-06-06 17:14:57,366 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:14:57] 2025-06-06 17:14:57,369 [wrapper] pilotpid: 2677853
[2025-06-06 13:14:57] 2025-06-06 17:14:57,371 [wrapper] Pilot exit status: 0
[2025-06-06 13:14:57] 2025-06-06 17:14:57,382 [wrapper] pandaids: 6669945371
[2025-06-06 13:14:57] 2025-06-06 17:14:57,449 [wrapper] cleanup supervisor_pilot 2883974 2677854
[2025-06-06 13:14:57] 2025-06-06 17:14:57,451 [wrapper] Test setup, not cleaning
[2025-06-06 13:14:57] 2025-06-06 17:14:57,454 [wrapper] apfmon messages muted
[2025-06-06 13:14:57] 2025-06-06 17:14:57,457 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:14:57] 2025-06-06 17:14:57,460 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:14:57]  *** Error codes and diagnostics ***
[2025-06-06 13:14:57]     "exeErrorCode": 0,
[2025-06-06 13:14:57]     "exeErrorDiag": "",
[2025-06-06 13:14:57]     "pilotErrorCode": 0,
[2025-06-06 13:14:57]     "pilotErrorDiag": "",
[2025-06-06 13:14:57]  *** Listing of results directory ***
[2025-06-06 13:14:57] total 417100
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas    495897 May 29 05:21 pilot3.tar.gz
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas      5111 May 29 05:25 queuedata.json
[2025-06-06 13:14:57] -rwx------. 1 boincer umatlas     37140 May 29 05:27 runpilot2-wrapper.sh
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas       100 Jun  6 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:14:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 11:31 run_atlas
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas       105 Jun  6 11:31 job.xml
[2025-06-06 13:14:57] -rw-r--r--. 2 boincer umatlas 224706173 Jun  6 11:31 EVNT.44871834._002481.pool.root.1
[2025-06-06 13:14:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 11:31 start_atlas.sh
[2025-06-06 13:14:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 11:31 shared
[2025-06-06 13:14:57] -rw-r--r--. 2 boincer umatlas    508880 Jun  6 11:31 input.tar.gz
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas         0 Jun  6 11:31 boinc_lockfile
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas      2556 Jun  6 11:31 pandaJob.out
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas    985740 Jun  6 11:31 agis_schedconf.cvmfs.json
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas   1598969 Jun  6 11:31 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:14:57] drwx------. 4 boincer umatlas      4096 Jun  6 11:31 pilot3
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas      6855 Jun  6 13:13 init_data.xml
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas 196763889 Jun  6 13:14 HITS.44871837._098292.pool.root.1
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas       529 Jun  6 13:14 boinc_task_state.xml
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas        95 Jun  6 13:14 pilot_heartbeat.json
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas      1041 Jun  6 13:14 memory_monitor_summary.json
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas    308578 Jun  6 13:14 log.44871837._098292.job.log.tgz.1
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas      7721 Jun  6 13:14 heartbeat.json
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 13:14 boinc_mmap_file
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas        27 Jun  6 13:14 wrapper_checkpoint.txt
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas      5058 Jun  6 13:14 pilotlog.txt
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas    596721 Jun  6 13:14 log.44871837._098292.job.log.1
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas       357 Jun  6 13:14 output.list
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas       620 Jun  6 13:14 runtime_log
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas    921600 Jun  6 13:14 result.tar.gz
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas      8664 Jun  6 13:14 runtime_log.err
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas       654 Jun  6 13:14 NMvKDmwioe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsGeKDmIFIFGm.diag
[2025-06-06 13:14:57] -rw-r--r--. 1 boincer umatlas     20930 Jun  6 13:14 stderr.txt
[2025-06-06 13:14:57] HITS file was successfully produced:
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas 196763889 Jun  6 13:14 shared/HITS.pool.root.1
[2025-06-06 13:14:57]  *** Contents of shared directory: ***
[2025-06-06 13:14:57] total 413020
[2025-06-06 13:14:57] -rw-r--r--. 2 boincer umatlas 224706173 Jun  6 11:31 ATLAS.root_0
[2025-06-06 13:14:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 11:31 start_atlas.sh
[2025-06-06 13:14:57] -rw-r--r--. 2 boincer umatlas    508880 Jun  6 11:31 input.tar.gz
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas 196763889 Jun  6 13:14 HITS.pool.root.1
[2025-06-06 13:14:57] -rw-------. 1 boincer umatlas    921600 Jun  6 13:14 result.tar.gz
13:14:59 (2674194): run_atlas exited; CPU time 46185.724248
13:14:59 (2674194): called boinc_finish(0)

</stderr_txt>
]]>

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