Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:22:12 (3378350): wrapper (7.7.26015): starting
11:22:12 (3378350): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 11:22:12] Arguments: --nthreads 8
[2025-06-06 11:22:12] Threads: 8
[2025-06-06 11:22:12] Checking for CVMFS
[2025-06-06 11:22:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:22:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:22:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:22:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:22:13] 2.12.6.0 3451353 26298 460152 146867 2 201 28902145 32935936 14384 16776704 0 145139876 99.731 103973405 26301 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 11:22:13] CVMFS is ok
[2025-06-06 11:22:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:22:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 11:22:13] Further information can be found at the LHC@home message board.
[2025-06-06 11:22:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:22:13] Checking for apptainer binary...
[2025-06-06 11:22:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 11:22:13] Running /usr/bin/apptainer --version
[2025-06-06 11:22:13] apptainer version 1.4.1-1.el9
[2025-06-06 11:22:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:22:13] c6-12-27-2.aglt2.org
[2025-06-06 11:22:13] apptainer works
[2025-06-06 11:22:13] Set ATHENA_PROC_NUMBER=8
[2025-06-06 11:22:13] Set ATHENA_CORE_NUMBER=8
[2025-06-06 11:22:13] Starting ATLAS job with PandaID=6669442889
[2025-06-06 11:22:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 12:56:31]  *** The last 200 lines of the pilot log: ***
[2025-06-06 12:56:31]  filetype=log
[2025-06-06 12:56:31]  guid=858bed73-8fea-4b37-b402-b64f9606e47b
[2025-06-06 12:56:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 12:56:31]  is_altstaged=None
[2025-06-06 12:56:31]  is_tar=False
[2025-06-06 12:56:31]  lfn=log.44871837._096159.job.log.tgz.1
[2025-06-06 12:56:31]  mtime=0
[2025-06-06 12:56:31]  protocol_id=None
[2025-06-06 12:56:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 12:56:31]  replicas=None
[2025-06-06 12:56:31]  scope=mc23_13p6TeV
[2025-06-06 12:56:31]  status=None
[2025-06-06 12:56:31]  status_code=0
[2025-06-06 12:56:31]  storage_token=
[2025-06-06 12:56:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669442889/log.44871837._096159.job.log.tgz.1
[2025-06-06 12:56:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/0f/log.44871837._096159.job.log.tgz.1
[2025-06-06 12:56:31]  workdir=None
[2025-06-06 12:56:31] ]
[2025-06-06 12:56:31] 2025-06-06 16:56:08,592 | INFO     | transferring file log.44871837._096159.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669442889/log.44871837._096159.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 12:56:31] 2025-06-06 16:56:08,592 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669442889/log.44871837._096159.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._096159.job
[2025-06-06 12:56:31] 2025-06-06 16:56:08,609 | INFO     | adding to output.list: log.44871837._096159.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/0f/log.44871837._096159.job.log.tg
[2025-06-06 12:56:31] 2025-06-06 16:56:08,610 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 12:56:31] 2025-06-06 16:56:08,610 | INFO     | summary of transferred files:
[2025-06-06 12:56:31] 2025-06-06 16:56:08,610 | INFO     |  -- lfn=log.44871837._096159.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 12:56:31] 2025-06-06 16:56:08,610 | INFO     | stage-out finished correctly
[2025-06-06 12:56:31] 2025-06-06 16:56:09,469 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 12:56:31] 2025-06-06 16:56:09,517 | INFO     | job 6669442889 has state=finished
[2025-06-06 12:56:31] 2025-06-06 16:56:09,518 | INFO     | preparing for final server update for job 6669442889 in state='finished'
[2025-06-06 12:56:31] 2025-06-06 16:56:09,518 | INFO     | this job has now completed (state=finished)
[2025-06-06 12:56:31] 2025-06-06 16:56:09,518 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 12:56:31] 2025-06-06 16:56:09,519 | INFO     | log transfer has been attempted: DONE
[2025-06-06 12:56:31] 2025-06-06 16:56:09,519 | INFO     | job 6669442889 has finished - writing final server update
[2025-06-06 12:56:31] 2025-06-06 16:56:09,519 | INFO     | total number of processed events: 400 (read)
[2025-06-06 12:56:31] 2025-06-06 16:56:09,536 | INFO     | executing command: lscpu
[2025-06-06 12:56:31] 2025-06-06 16:56:09,605 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 12:56:31] 2025-06-06 16:56:10,549 | WARNING  | process 3389772 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 12:56:31] 2025-06-06 16:56:10,550 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669442889/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:56:31] 2025-06-06 16:56:10,715 | INFO     | number of running child processes to parent process 3389772: 1
[2025-06-06 12:56:31] 2025-06-06 16:56:10,715 | INFO     | maximum number of monitored processes: 6
[2025-06-06 12:56:31] 2025-06-06 16:56:12,230 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 12:56:31] 2025-06-06 16:56:12,230 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669442889/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:56:31] 2025-06-06 16:56:12,230 | INFO     | extracted standard info from prmon json
[2025-06-06 12:56:31] 2025-06-06 16:56:12,231 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 12:56:31] 2025-06-06 16:56:12,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 12:56:31] 2025-06-06 16:56:12,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 12:56:31] 2025-06-06 16:56:12,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 12:56:31] 2025-06-06 16:56:12,232 | INFO     | fitting pss+swap vs Time
[2025-06-06 12:56:31] 2025-06-06 16:56:12,233 | INFO     | sum of square deviations: 190403570.0
[2025-06-06 12:56:31] 2025-06-06 16:56:12,233 | INFO     | sum of deviations: -18121736954.999996
[2025-06-06 12:56:31] 2025-06-06 16:56:12,233 | INFO     | mean x: 1749226235.0
[2025-06-06 12:56:31] 2025-06-06 16:56:12,233 | INFO     | mean y: 2455496.564705882
[2025-06-06 12:56:31] 2025-06-06 16:56:12,233 | INFO     | -- intersect: 166485771463.04056
[2025-06-06 12:56:31] 2025-06-06 16:56:12,233 | INFO     | intersect: 166485771463.04056
[2025-06-06 12:56:31] 2025-06-06 16:56:12,233 | INFO     | chi2: 0.2587853311423447
[2025-06-06 12:56:31] 2025-06-06 16:56:12,234 | INFO     | -- intersect: 166485771463.04056
[2025-06-06 12:56:31] 2025-06-06 16:56:12,234 | INFO     | current memory leak: -95.18 B/s (using 85 data points, chi2=0.26)
[2025-06-06 12:56:31] 2025-06-06 16:56:12,234 | INFO     | ..............................
[2025-06-06 12:56:31] 2025-06-06 16:56:12,234 | INFO     | . Timing measurements:
[2025-06-06 12:56:31] 2025-06-06 16:56:12,234 | INFO     | . get job = 0 s
[2025-06-06 12:56:31] 2025-06-06 16:56:12,234 | INFO     | . initial setup = 2 s
[2025-06-06 12:56:31] 2025-06-06 16:56:12,234 | INFO     | . payload setup = 6 s
[2025-06-06 12:56:31] 2025-06-06 16:56:12,235 | INFO     | . stage-in = 0 s
[2025-06-06 12:56:31] 2025-06-06 16:56:12,235 | INFO     | . payload execution = 5600 s
[2025-06-06 12:56:31] 2025-06-06 16:56:12,235 | INFO     | . stage-out = 0 s
[2025-06-06 12:56:31] 2025-06-06 16:56:12,235 | INFO     | . log creation = 0 s
[2025-06-06 12:56:31] 2025-06-06 16:56:12,235 | INFO     | ..............................
[2025-06-06 12:56:31] 2025-06-06 16:56:12,719 | INFO     | 
[2025-06-06 12:56:31] 2025-06-06 16:56:12,719 | INFO     | job summary report
[2025-06-06 12:56:31] 2025-06-06 16:56:12,719 | INFO     | --------------------------------------------------
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | PanDA job id: 6669442889
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | task id: 44871837
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | errors: (none)
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | pilot state: finished 
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | transexitcode: 0
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | exeerrorcode: 0
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | exeerrordiag: 
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | exitcode: 0
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | exitmsg: OK
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | cpuconsumptiontime: 41198 s
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | nevents: 400
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | neventsw: 0
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | pid: 3389772
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | pgrp: 3389772
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | corecount: 8
[2025-06-06 12:56:31] 2025-06-06 16:56:12,720 | INFO     | event service: False
[2025-06-06 12:56:31] 2025-06-06 16:56:12,721 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 5610: 2424155, 5611: 2433096, 5612: 2433152, 5614: 2433450}
[2025-06-06 12:56:31] 2025-06-06 16:56:12,721 | INFO     | --------------------------------------------------
[2025-06-06 12:56:31] 2025-06-06 16:56:12,721 | INFO     | 
[2025-06-06 12:56:31] 2025-06-06 16:56:12,721 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 12:56:31] 2025-06-06 16:56:12,735 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 12:56:31] 2025-06-06 16:56:12,736 | INFO     | job 6669442889 has completed (purged errors)
[2025-06-06 12:56:31] 2025-06-06 16:56:12,737 | INFO     | overall cleanup function is called
[2025-06-06 12:56:31] 2025-06-06 16:56:13,743 | INFO     | --- collectZombieJob: --- 10, [3389772]
[2025-06-06 12:56:31] 2025-06-06 16:56:13,744 | INFO     | zombie collector waiting for pid 3389772
[2025-06-06 12:56:31] 2025-06-06 16:56:13,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 12:56:31] 2025-06-06 16:56:13,744 | INFO     | collected zombie processes
[2025-06-06 12:56:31] 2025-06-06 16:56:13,744 | INFO     | will attempt to kill all subprocesses of pid=3389772
[2025-06-06 12:56:31] 2025-06-06 16:56:13,933 | INFO     | process IDs to be killed: [3389772] (in reverse order)
[2025-06-06 12:56:31] 2025-06-06 16:56:14,005 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 12:56:31] 2025-06-06 16:56:14,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 12:56:31] 2025-06-06 16:56:14,018 | INFO     | did not find any defunct processes belonging to 3389772
[2025-06-06 12:56:31] 2025-06-06 16:56:14,031 | INFO     | did not find any defunct processes belonging to 3389772
[2025-06-06 12:56:31] 2025-06-06 16:56:14,031 | INFO     | ready for new job
[2025-06-06 12:56:31] 2025-06-06 16:56:14,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 12:56:31] 2025-06-06 16:56:14,033 | INFO     | **************************************
[2025-06-06 12:56:31] 2025-06-06 16:56:14,033 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 12:56:31] 2025-06-06 16:56:14,034 | INFO     | **************************************
[2025-06-06 12:56:31] 2025-06-06 16:56:14,034 | INFO     | 
[2025-06-06 12:56:31] 2025-06-06 16:56:14,051 | INFO     | architecture information:
[2025-06-06 12:56:31] 2025-06-06 16:56:14,051 | INFO     | executing command: cat /etc/os-release
[2025-06-06 12:56:31] 2025-06-06 16:56:14,065 | INFO     | cat /etc/os-release:
[2025-06-06 12:56:31] NAME="CentOS Linux"
[2025-06-06 12:56:31] VERSION="7 (Core)"
[2025-06-06 12:56:31] ID="centos"
[2025-06-06 12:56:31] ID_LIKE="rhel fedora"
[2025-06-06 12:56:31] VERSION_ID="7"
[2025-06-06 12:56:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 12:56:31] ANSI_COLOR="0;31"
[2025-06-06 12:56:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 12:56:31] HOME_URL="https://www.centos.org/"
[2025-06-06 12:56:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 12:56:31] 
[2025-06-06 12:56:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 12:56:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 12:56:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 12:56:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 12:56:31] 
[2025-06-06 12:56:31] 2025-06-06 16:56:14,065 | INFO     | **************************************
[2025-06-06 12:56:31] 2025-06-06 16:56:14,568 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 12:56:31] 2025-06-06 16:56:14,582 | INFO     | sufficient remaining disk space (96603209728 B)
[2025-06-06 12:56:31] 2025-06-06 16:56:14,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 12:56:31] 2025-06-06 16:56:14,582 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 12:56:31] 2025-06-06 16:56:14,583 | INFO     | update_server=False
[2025-06-06 12:56:31] 2025-06-06 16:56:14,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 12:56:31] 2025-06-06 16:56:14,583 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 12:56:31] 2025-06-06 16:56:14,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:56:31] 2025-06-06 16:56:14,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 12:56:31] 2025-06-06 16:56:14,584 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 12:56:31] 2025-06-06 16:56:14,584 | INFO     | aborting loop
[2025-06-06 12:56:31] 2025-06-06 16:56:14,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 12:56:31] 2025-06-06 16:56:14,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 12:56:31] 2025-06-06 16:56:14,765 | INFO     | all data control threads have been joined
[2025-06-06 12:56:31] 2025-06-06 16:56:15,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 12:56:31] 2025-06-06 16:56:15,587 | INFO     | [job] retrieve thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:15,589 | INFO     | [job] job monitor thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:15,618 | INFO     | all job control threads have been joined
[2025-06-06 12:56:31] 2025-06-06 16:56:15,695 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:15,770 | INFO     | [data] control thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:15,771 | INFO     | all payload control threads have been joined
[2025-06-06 12:56:31] 2025-06-06 16:56:16,316 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:16,323 | INFO     | [payload] failed_post thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:16,589 | INFO     | [data] copytool_out thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:16,623 | INFO     | [job] control thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:16,682 | INFO     | [data] copytool_in thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:16,775 | INFO     | [payload] control thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:16,783 | INFO     | [job] validate thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:16,950 | INFO     | [payload] validate_post thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:17,082 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:17,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:56:31] 2025-06-06 16:56:18,323 | INFO     | [job] queue monitor thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:19,527 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:24,619 | INFO     | job.realtimelogging is not enabled
[2025-06-06 12:56:31] 2025-06-06 16:56:25,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 12:56:31] 2025-06-06 16:56:26,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147566487360)>', '<ExcThread(monitor, started 140147223930624)>']
[2025-06-06 12:56:31] 2025-06-06 16:56:26,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 12:56:31] 2025-06-06 16:56:26,639 | INFO     | [monitor] control thread has ended
[2025-06-06 12:56:31] 2025-06-06 16:56:31,650 | INFO     | all workflow threads have been joined
[2025-06-06 12:56:31] 2025-06-06 16:56:31,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 12:56:31] 2025-06-06 16:56:31,650 | INFO     | traces error code: 0
[2025-06-06 12:56:31] 2025-06-06 16:56:31,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 12:56:31] 2025-06-06 16:56:31,801 [wrapper] ==== pilot stdout END ====
[2025-06-06 12:56:31] 2025-06-06 16:56:31,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 12:56:31] 2025-06-06 16:56:31,805 [wrapper] pilotpid: 3382733
[2025-06-06 12:56:31] 2025-06-06 16:56:31,806 [wrapper] Pilot exit status: 0
[2025-06-06 12:56:31] 2025-06-06 16:56:31,815 [wrapper] pandaids: 6669442889
[2025-06-06 12:56:31] 2025-06-06 16:56:31,858 [wrapper] cleanup supervisor_pilot 3563514 3382734
[2025-06-06 12:56:31] 2025-06-06 16:56:31,860 [wrapper] Test setup, not cleaning
[2025-06-06 12:56:31] 2025-06-06 16:56:31,862 [wrapper] apfmon messages muted
[2025-06-06 12:56:31] 2025-06-06 16:56:31,864 [wrapper] ==== wrapper stdout END ====
[2025-06-06 12:56:31] 2025-06-06 16:56:31,866 [wrapper] ==== wrapper stderr END ====
[2025-06-06 12:56:31]  *** Error codes and diagnostics ***
[2025-06-06 12:56:31]     "exeErrorCode": 0,
[2025-06-06 12:56:31]     "exeErrorDiag": "",
[2025-06-06 12:56:31]     "pilotErrorCode": 0,
[2025-06-06 12:56:31]     "pilotErrorDiag": "",
[2025-06-06 12:56:31]  *** Listing of results directory ***
[2025-06-06 12:56:31] total 417176
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas    495897 May 29 02:04 pilot3.tar.gz
[2025-06-06 12:56:31] -rwx------. 1 boincer umatlas     37140 May 29 02:19 runpilot2-wrapper.sh
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas      5111 May 29 02:19 queuedata.json
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas       100 Jun  6 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 12:56:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 11:22 run_atlas
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas       105 Jun  6 11:22 job.xml
[2025-06-06 12:56:31] -rw-r--r--. 2 boincer umatlas 227269074 Jun  6 11:22 EVNT.44871834._003789.pool.root.1
[2025-06-06 12:56:31] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 11:22 shared
[2025-06-06 12:56:31] -rw-r--r--. 2 boincer umatlas    508872 Jun  6 11:22 input.tar.gz
[2025-06-06 12:56:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 11:22 start_atlas.sh
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas         0 Jun  6 11:22 boinc_lockfile
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 11:22 pandaJob.out
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas    985740 Jun  6 11:22 agis_schedconf.cvmfs.json
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas   1598969 Jun  6 11:22 agis_ddmendpoints.agis.ALL.json
[2025-06-06 12:56:31] drwx------. 4 boincer umatlas      4096 Jun  6 11:22 pilot3
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas      6859 Jun  6 12:55 init_data.xml
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas        95 Jun  6 12:55 pilot_heartbeat.json
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas 194340898 Jun  6 12:55 HITS.44871837._096159.pool.root.1
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas       529 Jun  6 12:55 boinc_task_state.xml
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas      1042 Jun  6 12:56 memory_monitor_summary.json
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas    332051 Jun  6 12:56 log.44871837._096159.job.log.tgz.1
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas      7726 Jun  6 12:56 heartbeat.json
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 12:56 boinc_mmap_file
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas        27 Jun  6 12:56 wrapper_checkpoint.txt
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas      4548 Jun  6 12:56 pilotlog.txt
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas    542388 Jun  6 12:56 log.44871837._096159.job.log.1
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas       357 Jun  6 12:56 output.list
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas       620 Jun  6 12:56 runtime_log
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas    890880 Jun  6 12:56 result.tar.gz
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas      8669 Jun  6 12:56 runtime_log.err
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas       654 Jun  6 12:56 ML2LDmpmle7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRydKDmh0xDwn.diag
[2025-06-06 12:56:31] -rw-r--r--. 1 boincer umatlas     21222 Jun  6 12:56 stderr.txt
[2025-06-06 12:56:31] HITS file was successfully produced:
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas 194340898 Jun  6 12:55 shared/HITS.pool.root.1
[2025-06-06 12:56:31]  *** Contents of shared directory: ***
[2025-06-06 12:56:31] total 413124
[2025-06-06 12:56:31] -rw-r--r--. 2 boincer umatlas 227269074 Jun  6 11:22 ATLAS.root_0
[2025-06-06 12:56:31] -rw-r--r--. 2 boincer umatlas    508872 Jun  6 11:22 input.tar.gz
[2025-06-06 12:56:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 11:22 start_atlas.sh
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas 194340898 Jun  6 12:55 HITS.pool.root.1
[2025-06-06 12:56:31] -rw-------. 1 boincer umatlas    890880 Jun  6 12:56 result.tar.gz
12:56:33 (3378350): run_atlas exited; CPU time 41387.444385
12:56:33 (3378350): called boinc_finish(0)

</stderr_txt>
]]>

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