Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:56:16 (3229250): wrapper (7.7.26015): starting
10:56:16 (3229250): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 10:56:16] Arguments: --nthreads 8
[2025-06-06 10:56:16] Threads: 8
[2025-06-06 10:56:16] Checking for CVMFS
[2025-06-06 10:56:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 10:56:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 10:56:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 10:56:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 10:56:17] 2.12.6.0 5356 2851 302800 146865 2 107 25720613 32935936 22222 16776704 0 24293612 99.558 22678116 22746 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 10:56:17] CVMFS is ok
[2025-06-06 10:56:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 10:56:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 10:56:17] Further information can be found at the LHC@home message board.
[2025-06-06 10:56:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 10:56:17] Checking for apptainer binary...
[2025-06-06 10:56:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 10:56:17] Running /usr/bin/apptainer --version
[2025-06-06 10:56:17] apptainer version 1.4.1-1.el9
[2025-06-06 10:56:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 10:56:17] c7-16-8.aglt2.org
[2025-06-06 10:56:17] apptainer works
[2025-06-06 10:56:17] Set ATHENA_PROC_NUMBER=8
[2025-06-06 10:56:17] Set ATHENA_CORE_NUMBER=8
[2025-06-06 10:56:17] Starting ATLAS job with PandaID=6682172179
[2025-06-06 10:56:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:55:00]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:55:00]  lfn=log.45006595._057153.job.log.tgz.1
[2025-06-06 11:55:00]  mtime=0
[2025-06-06 11:55:00]  protocol_id=None
[2025-06-06 11:55:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 11:55:00]  replicas=None
[2025-06-06 11:55:00]  scope=mc23_13p6TeV
[2025-06-06 11:55:00]  status=None
[2025-06-06 11:55:00]  status_code=0
[2025-06-06 11:55:00]  storage_token=
[2025-06-06 11:55:00]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6682172179/log.45006595._057153.job.log.tgz.1
[2025-06-06 11:55:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/6a/log.45006595._057153.job.log.tgz.1
[2025-06-06 11:55:00]  workdir=None
[2025-06-06 11:55:00] ]
[2025-06-06 11:55:00] 2025-06-06 15:54:21,078 | INFO     | transferring file log.45006595._057153.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6682172179/log.45006595._057153.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 11:55:00] 2025-06-06 15:54:21,078 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6682172179/log.45006595._057153.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._057153.job
[2025-06-06 11:55:00] 2025-06-06 15:54:21,097 | INFO     | adding to output.list: log.45006595._057153.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/6a/log.45006595._057153.job.log.tg
[2025-06-06 11:55:00] 2025-06-06 15:54:21,097 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 11:55:00] 2025-06-06 15:54:21,098 | INFO     | summary of transferred files:
[2025-06-06 11:55:00] 2025-06-06 15:54:21,098 | INFO     |  -- lfn=log.45006595._057153.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 11:55:00] 2025-06-06 15:54:21,098 | INFO     | stage-out finished correctly
[2025-06-06 11:55:00] 2025-06-06 15:54:22,297 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 11:55:00] 2025-06-06 15:54:23,551 | INFO     | job 6682172179 has state=finished
[2025-06-06 11:55:00] 2025-06-06 15:54:23,551 | INFO     | preparing for final server update for job 6682172179 in state='finished'
[2025-06-06 11:55:00] 2025-06-06 15:54:23,552 | INFO     | this job has now completed (state=finished)
[2025-06-06 11:55:00] 2025-06-06 15:54:23,552 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 11:55:00] 2025-06-06 15:54:23,552 | INFO     | log transfer has been attempted: DONE
[2025-06-06 11:55:00] 2025-06-06 15:54:23,552 | INFO     | job 6682172179 has finished - writing final server update
[2025-06-06 11:55:00] 2025-06-06 15:54:23,552 | INFO     | total number of processed events: 400 (read)
[2025-06-06 11:55:00] 2025-06-06 15:54:23,553 | INFO     | executing command: lscpu
[2025-06-06 11:55:00] 2025-06-06 15:54:23,623 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 11:55:00] 2025-06-06 15:54:25,288 | WARNING  | process 3240335 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 11:55:00] 2025-06-06 15:54:25,289 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6682172179/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:55:00] 2025-06-06 15:54:25,627 | INFO     | number of running child processes to parent process 3240335: 1
[2025-06-06 11:55:00] 2025-06-06 15:54:25,628 | INFO     | maximum number of monitored processes: 6
[2025-06-06 11:55:00] 2025-06-06 15:54:27,517 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 11:55:00] 2025-06-06 15:54:27,524 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3278.0327604166673
[2025-06-06 11:55:00] 2025-06-06 15:54:27,543 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6682172179/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:55:00] 2025-06-06 15:54:27,544 | INFO     | extracted standard info from prmon json
[2025-06-06 11:55:00] 2025-06-06 15:54:27,544 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:55:00] 2025-06-06 15:54:27,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:55:00] 2025-06-06 15:54:27,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:55:00] 2025-06-06 15:54:27,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:55:00] 2025-06-06 15:54:27,547 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:55:00] 2025-06-06 15:54:27,548 | INFO     | sum of square deviations: 38744912.5
[2025-06-06 11:55:00] 2025-06-06 15:54:27,548 | INFO     | sum of deviations: -5562518416.5
[2025-06-06 11:55:00] 2025-06-06 15:54:27,548 | INFO     | mean x: 1749223610.5
[2025-06-06 11:55:00] 2025-06-06 15:54:27,548 | INFO     | mean y: 2322381.62
[2025-06-06 11:55:00] 2025-06-06 15:54:27,549 | INFO     | -- intersect: 251134352889.69955
[2025-06-06 11:55:00] 2025-06-06 15:54:27,549 | INFO     | intersect: 251134352889.69955
[2025-06-06 11:55:00] 2025-06-06 15:54:27,549 | INFO     | chi2: 0.12272427451985508
[2025-06-06 11:55:00] 2025-06-06 15:54:27,549 | INFO     | -- intersect: 251134352889.69955
[2025-06-06 11:55:00] 2025-06-06 15:54:27,549 | INFO     | current memory leak: -143.57 B/s (using 50 data points, chi2=0.12)
[2025-06-06 11:55:00] 2025-06-06 15:54:27,550 | INFO     | could have reported an average CPU frequency of 3244 MHz (5 samples)
[2025-06-06 11:55:00] 2025-06-06 15:54:27,550 | INFO     | ..............................
[2025-06-06 11:55:00] 2025-06-06 15:54:27,550 | INFO     | . Timing measurements:
[2025-06-06 11:55:00] 2025-06-06 15:54:27,550 | INFO     | . get job = 0 s
[2025-06-06 11:55:00] 2025-06-06 15:54:27,551 | INFO     | . initial setup = 2 s
[2025-06-06 11:55:00] 2025-06-06 15:54:27,551 | INFO     | . payload setup = 5 s
[2025-06-06 11:55:00] 2025-06-06 15:54:27,551 | INFO     | . stage-in = 0 s
[2025-06-06 11:55:00] 2025-06-06 15:54:27,551 | INFO     | . payload execution = 3449 s
[2025-06-06 11:55:00] 2025-06-06 15:54:27,551 | INFO     | . stage-out = 0 s
[2025-06-06 11:55:00] 2025-06-06 15:54:27,551 | INFO     | . log creation = 0 s
[2025-06-06 11:55:00] 2025-06-06 15:54:27,551 | INFO     | ..............................
[2025-06-06 11:55:00] 2025-06-06 15:54:27,625 | INFO     | 
[2025-06-06 11:55:00] 2025-06-06 15:54:27,626 | INFO     | job summary report
[2025-06-06 11:55:00] 2025-06-06 15:54:27,626 | INFO     | --------------------------------------------------
[2025-06-06 11:55:00] 2025-06-06 15:54:27,626 | INFO     | PanDA job id: 6682172179
[2025-06-06 11:55:00] 2025-06-06 15:54:27,626 | INFO     | task id: 45006595
[2025-06-06 11:55:00] 2025-06-06 15:54:27,626 | INFO     | errors: (none)
[2025-06-06 11:55:00] 2025-06-06 15:54:27,627 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:55:00] 2025-06-06 15:54:27,627 | INFO     | pilot state: finished 
[2025-06-06 11:55:00] 2025-06-06 15:54:27,627 | INFO     | transexitcode: 0
[2025-06-06 11:55:00] 2025-06-06 15:54:27,627 | INFO     | exeerrorcode: 0
[2025-06-06 11:55:00] 2025-06-06 15:54:27,627 | INFO     | exeerrordiag: 
[2025-06-06 11:55:00] 2025-06-06 15:54:27,627 | INFO     | exitcode: 0
[2025-06-06 11:55:00] 2025-06-06 15:54:27,627 | INFO     | exitmsg: OK
[2025-06-06 11:55:00] 2025-06-06 15:54:27,627 | INFO     | cpuconsumptiontime: 25115 s
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | nevents: 400
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | neventsw: 0
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | pid: 3240335
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | pgrp: 3240335
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | corecount: 8
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | event service: False
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | sizes: {0: 2397632, 1: 2397632, 4: 2397922, 11: 2397950, 3458: 2423600, 3459: 2432541, 3460: 2432725, 3466: 2432951}
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | --------------------------------------------------
[2025-06-06 11:55:00] 2025-06-06 15:54:27,628 | INFO     | 
[2025-06-06 11:55:00] 2025-06-06 15:54:27,629 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-06 11:55:00] 2025-06-06 15:54:27,648 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,648 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,648 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,648 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:55:00] 2025-06-06 15:54:27,649 | INFO     | job 6682172179 has completed (purged errors)
[2025-06-06 11:55:00] 2025-06-06 15:54:27,650 | INFO     | overall cleanup function is called
[2025-06-06 11:55:00] 2025-06-06 15:54:27,743 | INFO     | PID=3233287 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 11:55:00] 2025-06-06 15:54:27,743 | INFO     | .. there are 23 such processes running
[2025-06-06 11:55:00] 2025-06-06 15:54:28,660 | INFO     | --- collectZombieJob: --- 10, [3240335]
[2025-06-06 11:55:00] 2025-06-06 15:54:28,660 | INFO     | zombie collector waiting for pid 3240335
[2025-06-06 11:55:00] 2025-06-06 15:54:28,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:55:00] 2025-06-06 15:54:28,660 | INFO     | collected zombie processes
[2025-06-06 11:55:00] 2025-06-06 15:54:28,660 | INFO     | will attempt to kill all subprocesses of pid=3240335
[2025-06-06 11:55:00] 2025-06-06 15:54:29,055 | INFO     | process IDs to be killed: [3240335] (in reverse order)
[2025-06-06 11:55:00] 2025-06-06 15:54:29,182 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:55:00] 2025-06-06 15:54:29,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:55:00] 2025-06-06 15:54:29,200 | INFO     | did not find any defunct processes belonging to 3240335
[2025-06-06 11:55:00] 2025-06-06 15:54:29,217 | INFO     | did not find any defunct processes belonging to 3240335
[2025-06-06 11:55:00] 2025-06-06 15:54:29,217 | INFO     | ready for new job
[2025-06-06 11:55:00] 2025-06-06 15:54:29,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:55:00] 2025-06-06 15:54:29,219 | INFO     | ***************************************
[2025-06-06 11:55:00] 2025-06-06 15:54:29,219 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 11:55:00] 2025-06-06 15:54:29,219 | INFO     | ***************************************
[2025-06-06 11:55:00] 2025-06-06 15:54:29,219 | INFO     | 
[2025-06-06 11:55:00] 2025-06-06 15:54:29,238 | INFO     | architecture information:
[2025-06-06 11:55:00] 2025-06-06 15:54:29,240 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:55:00] 2025-06-06 15:54:29,259 | INFO     | cat /etc/os-release:
[2025-06-06 11:55:00] NAME="CentOS Linux"
[2025-06-06 11:55:00] VERSION="7 (Core)"
[2025-06-06 11:55:00] ID="centos"
[2025-06-06 11:55:00] ID_LIKE="rhel fedora"
[2025-06-06 11:55:00] VERSION_ID="7"
[2025-06-06 11:55:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:55:00] ANSI_COLOR="0;31"
[2025-06-06 11:55:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:55:00] HOME_URL="https://www.centos.org/"
[2025-06-06 11:55:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:55:00] 
[2025-06-06 11:55:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:55:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:55:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:55:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:55:00] 
[2025-06-06 11:55:00] 2025-06-06 15:54:29,259 | INFO     | ***************************************
[2025-06-06 11:55:00] 2025-06-06 15:54:29,761 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-06 11:55:00] 2025-06-06 15:54:29,780 | INFO     | sufficient remaining disk space (76646711296 B)
[2025-06-06 11:55:00] 2025-06-06 15:54:29,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:55:00] 2025-06-06 15:54:29,781 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:55:00] 2025-06-06 15:54:29,781 | INFO     | update_server=False
[2025-06-06 11:55:00] 2025-06-06 15:54:29,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:55:00] 2025-06-06 15:54:29,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:55:00] 2025-06-06 15:54:29,782 | INFO     | aborting loop
[2025-06-06 11:55:00] 2025-06-06 15:54:29,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:55:00] 2025-06-06 15:54:29,811 | INFO     | all job control threads have been joined
[2025-06-06 11:55:00] 2025-06-06 15:54:30,786 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:30,787 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:30,817 | INFO     | [job] control thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:30,833 | INFO     | all data control threads have been joined
[2025-06-06 11:55:00] 2025-06-06 15:54:30,905 | INFO     | [job] validate thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:31,097 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:31,157 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:31,164 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:31,193 | INFO     | all payload control threads have been joined
[2025-06-06 11:55:00] 2025-06-06 15:54:31,487 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:31,788 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:31,838 | INFO     | [data] control thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:31,907 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:32,198 | INFO     | [payload] control thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:32,200 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:32,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:55:00] 2025-06-06 15:54:32,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:55:00] 2025-06-06 15:54:33,636 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:36,877 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:40,412 | INFO     | job.realtimelogging is not enabled
[2025-06-06 11:55:00] 2025-06-06 15:54:41,417 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:55:00] 2025-06-06 15:54:42,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225898841920)>', '<ExcThread(monitor, started 140225539974912)>']
[2025-06-06 11:55:00] 2025-06-06 15:54:47,250 | INFO     | all workflow threads have been joined
[2025-06-06 11:55:00] 2025-06-06 15:54:47,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:55:00] 2025-06-06 15:54:47,250 | INFO     | traces error code: 0
[2025-06-06 11:55:00] 2025-06-06 15:54:47,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:55:00] 2025-06-06 15:55:00,304 | INFO     | PID=3233287 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 11:55:00] 2025-06-06 15:55:00,305 | INFO     | .. there are 23 such processes running
[2025-06-06 11:55:00] 2025-06-06 15:55:00,305 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:55:00] 2025-06-06 15:55:00,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:55:00] 2025-06-06 15:55:00,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:55:00] 2025-06-06 15:55:00,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:55:00] 2025-06-06 15:55:00,305 | INFO     | [monitor] control thread has ended
[2025-06-06 11:55:00] 2025-06-06 15:55:00,436 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:55:00] 2025-06-06 15:55:00,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:55:00] 2025-06-06 15:55:00,440 [wrapper] pilotpid: 3233287
[2025-06-06 11:55:00] 2025-06-06 15:55:00,442 [wrapper] Pilot exit status: 0
[2025-06-06 11:55:00] 2025-06-06 15:55:00,453 [wrapper] pandaids: 6682172179
[2025-06-06 11:55:00] 2025-06-06 15:55:00,540 [wrapper] cleanup supervisor_pilot 3477572 3233288
[2025-06-06 11:55:00] 2025-06-06 15:55:00,543 [wrapper] Test setup, not cleaning
[2025-06-06 11:55:00] 2025-06-06 15:55:00,546 [wrapper] apfmon messages muted
[2025-06-06 11:55:00] 2025-06-06 15:55:00,549 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:55:00] 2025-06-06 15:55:00,551 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:55:00]  *** Error codes and diagnostics ***
[2025-06-06 11:55:00]     "exeErrorCode": 0,
[2025-06-06 11:55:00]     "exeErrorDiag": "",
[2025-06-06 11:55:00]     "pilotErrorCode": 0,
[2025-06-06 11:55:00]     "pilotErrorDiag": "",
[2025-06-06 11:55:00]  *** Listing of results directory ***
[2025-06-06 11:55:00] total 392864
[2025-06-06 11:55:00] -rwx------. 1 boincer umatlas     37140 Jun  6 10:55 runpilot2-wrapper.sh
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas      5112 Jun  6 10:55 queuedata.json
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas    529402 Jun  6 10:55 pilot3.tar.gz
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas       100 Jun  6 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:55:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 10:56 run_atlas
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas       105 Jun  6 10:56 job.xml
[2025-06-06 11:55:00] -rw-r--r--. 2 boincer umatlas 217051933 Jun  6 10:56 EVNT.45006593._001150.pool.root.1
[2025-06-06 11:55:00] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 10:56 start_atlas.sh
[2025-06-06 11:55:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 10:56 shared
[2025-06-06 11:55:00] -rw-r--r--. 2 boincer umatlas    541901 Jun  6 10:56 input.tar.gz
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas         0 Jun  6 10:56 boinc_lockfile
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas      2524 Jun  6 10:56 pandaJob.out
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas    985728 Jun  6 10:56 agis_schedconf.cvmfs.json
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas   1598969 Jun  6 10:56 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:55:00] drwx------. 4 boincer umatlas      4096 Jun  6 10:56 pilot3
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas      6930 Jun  6 11:45 init_data.xml
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas 180072088 Jun  6 11:53 HITS.45006595._057153.pool.root.1
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas       529 Jun  6 11:54 boinc_task_state.xml
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas      1031 Jun  6 11:54 memory_monitor_summary.json
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas    281237 Jun  6 11:54 log.45006595._057153.job.log.tgz.1
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas      7703 Jun  6 11:54 heartbeat.json
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 11:54 boinc_mmap_file
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas        27 Jun  6 11:54 wrapper_checkpoint.txt
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas       823 Jun  6 11:55 pilotlog.txt
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas        95 Jun  6 11:55 pilot_heartbeat.json
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas    357378 Jun  6 11:55 log.45006595._057153.job.log.1
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas       357 Jun  6 11:55 output.list
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas       620 Jun  6 11:55 runtime_log
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas    655360 Jun  6 11:55 result.tar.gz
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas      8655 Jun  6 11:55 runtime_log.err
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas       651 Jun  6 11:55 j3tMDm0enh7n9Rq4apOajLDm4fhM0noT9bVof3QYDm45aKDmIKvcpm.diag
[2025-06-06 11:55:00] -rw-r--r--. 1 boincer umatlas     21727 Jun  6 11:55 stderr.txt
[2025-06-06 11:55:00] HITS file was successfully produced:
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas 180072088 Jun  6 11:53 shared/HITS.pool.root.1
[2025-06-06 11:55:00]  *** Contents of shared directory: ***
[2025-06-06 11:55:00] total 389016
[2025-06-06 11:55:00] -rw-r--r--. 2 boincer umatlas 217051933 Jun  6 10:56 ATLAS.root_0
[2025-06-06 11:55:00] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 10:56 start_atlas.sh
[2025-06-06 11:55:00] -rw-r--r--. 2 boincer umatlas    541901 Jun  6 10:56 input.tar.gz
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas 180072088 Jun  6 11:53 HITS.pool.root.1
[2025-06-06 11:55:00] -rw-------. 1 boincer umatlas    655360 Jun  6 11:55 result.tar.gz
11:55:02 (3229250): run_atlas exited; CPU time 25200.622101
11:55:02 (3229250): called boinc_finish(0)

</stderr_txt>
]]>

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