Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:48:29 (353122): wrapper (7.7.26015): starting
10:48:29 (353122): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 10:48:29] Arguments: --nthreads 10
[2025-06-06 10:48:29] Threads: 10
[2025-06-06 10:48:29] Checking for CVMFS
[2025-06-06 10:48:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 10:48:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 10:48:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 10:48:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 10:48:29] 2.12.6.0 9368 4357 279264 146865 1 246 29310726 32935936 13378 16776704 0 19183297 99.515 21806450 33423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 10:48:29] CVMFS is ok
[2025-06-06 10:48:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 10:48:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 10:48:29] Further information can be found at the LHC@home message board.
[2025-06-06 10:48:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 10:48:29] Checking for apptainer binary...
[2025-06-06 10:48:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 10:48:29] Running /usr/bin/apptainer --version
[2025-06-06 10:48:29] apptainer version 1.4.1-1.el9
[2025-06-06 10:48:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 10:48:29] c-8-24.aglt2.org
[2025-06-06 10:48:29] apptainer works
[2025-06-06 10:48:29] Set ATHENA_PROC_NUMBER=10
[2025-06-06 10:48:29] Set ATHENA_CORE_NUMBER=10
[2025-06-06 10:48:29] Starting ATLAS job with PandaID=6669623522
[2025-06-06 10:48:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 12:57:37]  *** The last 200 lines of the pilot log: ***
[2025-06-06 12:57:37] 2025-06-06 16:57:13,572 | INFO     | number of running child processes to parent process 363595: 1
[2025-06-06 12:57:37] 2025-06-06 16:57:13,572 | INFO     | maximum number of monitored processes: 6
[2025-06-06 12:57:37] 2025-06-06 16:57:16,075 | INFO     | monitor loop #538: job 0:6669623522 is in state 'finished'
[2025-06-06 12:57:37] 2025-06-06 16:57:16,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,272 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 12:57:37] 2025-06-06 16:57:16,272 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669623522/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,273 | INFO     | extracted standard info from prmon json
[2025-06-06 12:57:37] 2025-06-06 16:57:16,273 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 12:57:37] 2025-06-06 16:57:16,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 12:57:37] 2025-06-06 16:57:16,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 12:57:37] 2025-06-06 16:57:16,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 12:57:37] 2025-06-06 16:57:16,277 | INFO     | fitting pss+swap vs Time
[2025-06-06 12:57:37] 2025-06-06 16:57:16,277 | INFO     | sum of square deviations: 620213360.3253978
[2025-06-06 12:57:37] 2025-06-06 16:57:16,278 | INFO     | sum of deviations: -1955434928.6984148
[2025-06-06 12:57:37] 2025-06-06 16:57:16,278 | INFO     | mean x: 1749225158.7698412
[2025-06-06 12:57:37] 2025-06-06 16:57:16,278 | INFO     | mean y: 2289334.0793650793
[2025-06-06 12:57:37] 2025-06-06 16:57:16,279 | INFO     | -- intersect: 5517320438.572177
[2025-06-06 12:57:37] 2025-06-06 16:57:16,279 | INFO     | intersect: 5517320438.572177
[2025-06-06 12:57:37] 2025-06-06 16:57:16,279 | INFO     | chi2: 1.8074084654857625
[2025-06-06 12:57:37] 2025-06-06 16:57:16,279 | INFO     | sum of square deviations: 549273562.4462796
[2025-06-06 12:57:37] 2025-06-06 16:57:16,280 | INFO     | sum of deviations: -630155213.7024775
[2025-06-06 12:57:37] 2025-06-06 16:57:16,280 | INFO     | mean x: 1749225006.2809918
[2025-06-06 12:57:37] 2025-06-06 16:57:16,280 | INFO     | mean y: 2292084.520661157
[2025-06-06 12:57:37] 2025-06-06 16:57:16,280 | INFO     | -- intersect: 2009094037.1533656
[2025-06-06 12:57:37] 2025-06-06 16:57:16,281 | INFO     | intersect: 2009094037.1533656
[2025-06-06 12:57:37] 2025-06-06 16:57:16,281 | INFO     | chi2: 1.7950576567850813
[2025-06-06 12:57:37] 2025-06-06 16:57:16,281 | INFO     | current chi2=1.7950576567850813 (change=0.6833435239754586 %)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,281 | INFO     | right removable region: 120
[2025-06-06 12:57:37] 2025-06-06 16:57:16,281 | INFO     | sum of square deviations: 549252822.4462796
[2025-06-06 12:57:37] 2025-06-06 16:57:16,282 | INFO     | sum of deviations: -19937165947.30579
[2025-06-06 12:57:37] 2025-06-06 16:57:16,282 | INFO     | mean x: 1749225311.2809918
[2025-06-06 12:57:37] 2025-06-06 16:57:16,282 | INFO     | mean y: 2327383.214876033
[2025-06-06 12:57:37] 2025-06-06 16:57:16,283 | INFO     | -- intersect: 63496940219.0874
[2025-06-06 12:57:37] 2025-06-06 16:57:16,283 | INFO     | intersect: 63496940219.0874
[2025-06-06 12:57:37] 2025-06-06 16:57:16,283 | INFO     | chi2: 0.30461806820978404
[2025-06-06 12:57:37] 2025-06-06 16:57:16,283 | INFO     | current chi2=0.30461806820978404 (change=83.1461413384542 %)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,283 | INFO     | sum of square deviations: 483920297.03448355
[2025-06-06 12:57:37] 2025-06-06 16:57:16,284 | INFO     | sum of deviations: -17450546070.75862
[2025-06-06 12:57:37] 2025-06-06 16:57:16,284 | INFO     | mean x: 1749225463.7931035
[2025-06-06 12:57:37] 2025-06-06 16:57:16,284 | INFO     | mean y: 2321397.5517241377
[2025-06-06 12:57:37] 2025-06-06 16:57:16,285 | INFO     | -- intersect: 63080765784.211754
[2025-06-06 12:57:37] 2025-06-06 16:57:16,285 | INFO     | intersect: 63080765784.211754
[2025-06-06 12:57:37] 2025-06-06 16:57:16,285 | INFO     | chi2: 0.26847755711697346
[2025-06-06 12:57:37] 2025-06-06 16:57:16,285 | INFO     | current chi2=0.26847755711697346 (change=11.864204676106532 %)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,285 | INFO     | left removable region: 20
[2025-06-06 12:57:37] 2025-06-06 16:57:16,286 | INFO     | sum of square deviations: 309999718.1100001
[2025-06-06 12:57:37] 2025-06-06 16:57:16,286 | INFO     | sum of deviations: -5096896512.5
[2025-06-06 12:57:37] 2025-06-06 16:57:16,286 | INFO     | mean x: 1749225585.83
[2025-06-06 12:57:37] 2025-06-06 16:57:16,287 | INFO     | mean y: 2295528.5
[2025-06-06 12:57:37] 2025-06-06 16:57:16,287 | INFO     | -- intersect: 28762391964.552513
[2025-06-06 12:57:37] 2025-06-06 16:57:16,287 | INFO     | intersect: 28762391964.552513
[2025-06-06 12:57:37] 2025-06-06 16:57:16,287 | INFO     | chi2: 0.15804606142480315
[2025-06-06 12:57:37] 2025-06-06 16:57:16,287 | INFO     | -- intersect: 28762391964.552513
[2025-06-06 12:57:37] 2025-06-06 16:57:16,287 | INFO     | current memory leak: -16.44 B/s (using 100 data points, chi2=0.16)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,288 | INFO     | ..............................
[2025-06-06 12:57:37] 2025-06-06 16:57:16,288 | INFO     | . Timing measurements:
[2025-06-06 12:57:37] 2025-06-06 16:57:16,288 | INFO     | . get job = 0 s
[2025-06-06 12:57:37] 2025-06-06 16:57:16,288 | INFO     | . initial setup = 2 s
[2025-06-06 12:57:37] 2025-06-06 16:57:16,288 | INFO     | . payload setup = 6 s
[2025-06-06 12:57:37] 2025-06-06 16:57:16,289 | INFO     | . stage-in = 0 s
[2025-06-06 12:57:37] 2025-06-06 16:57:16,289 | INFO     | . payload execution = 7684 s
[2025-06-06 12:57:37] 2025-06-06 16:57:16,289 | INFO     | . stage-out = 0 s
[2025-06-06 12:57:37] 2025-06-06 16:57:16,289 | INFO     | . log creation = 0 s
[2025-06-06 12:57:37] 2025-06-06 16:57:16,289 | INFO     | ..............................
[2025-06-06 12:57:37] 2025-06-06 16:57:16,394 | INFO     | 
[2025-06-06 12:57:37] 2025-06-06 16:57:16,394 | INFO     | job summary report
[2025-06-06 12:57:37] 2025-06-06 16:57:16,394 | INFO     | --------------------------------------------------
[2025-06-06 12:57:37] 2025-06-06 16:57:16,394 | INFO     | PanDA job id: 6669623522
[2025-06-06 12:57:37] 2025-06-06 16:57:16,394 | INFO     | task id: 44871837
[2025-06-06 12:57:37] 2025-06-06 16:57:16,394 | INFO     | errors: (none)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | pilot state: finished 
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | transexitcode: 0
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | exeerrorcode: 0
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | exeerrordiag: 
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | exitcode: 0
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | exitmsg: OK
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | cpuconsumptiontime: 60162 s
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | nevents: 400
[2025-06-06 12:57:37] 2025-06-06 16:57:16,395 | INFO     | neventsw: 0
[2025-06-06 12:57:37] 2025-06-06 16:57:16,396 | INFO     | pid: 363595
[2025-06-06 12:57:37] 2025-06-06 16:57:16,396 | INFO     | pgrp: 363595
[2025-06-06 12:57:37] 2025-06-06 16:57:16,396 | INFO     | corecount: 10
[2025-06-06 12:57:37] 2025-06-06 16:57:16,396 | INFO     | event service: False
[2025-06-06 12:57:37] 2025-06-06 16:57:16,396 | INFO     | sizes: {0: 2397220, 1: 2397419, 5: 2397625, 11: 2397681, 7694: 2425103, 7695: 2434044, 7696: 2434228, 7701: 2434398}
[2025-06-06 12:57:37] 2025-06-06 16:57:16,396 | INFO     | --------------------------------------------------
[2025-06-06 12:57:37] 2025-06-06 16:57:16,396 | INFO     | 
[2025-06-06 12:57:37] 2025-06-06 16:57:16,396 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 12:57:37] 2025-06-06 16:57:16,418 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,420 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 12:57:37] 2025-06-06 16:57:16,420 | INFO     | job 6669623522 has completed (purged errors)
[2025-06-06 12:57:37] 2025-06-06 16:57:16,420 | INFO     | overall cleanup function is called
[2025-06-06 12:57:37] 2025-06-06 16:57:17,428 | INFO     | --- collectZombieJob: --- 10, [363595]
[2025-06-06 12:57:37] 2025-06-06 16:57:17,429 | INFO     | zombie collector waiting for pid 363595
[2025-06-06 12:57:37] 2025-06-06 16:57:17,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 12:57:37] 2025-06-06 16:57:17,429 | INFO     | collected zombie processes
[2025-06-06 12:57:37] 2025-06-06 16:57:17,429 | INFO     | will attempt to kill all subprocesses of pid=363595
[2025-06-06 12:57:37] 2025-06-06 16:57:17,736 | INFO     | process IDs to be killed: [363595] (in reverse order)
[2025-06-06 12:57:37] 2025-06-06 16:57:17,837 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 12:57:37] 2025-06-06 16:57:17,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 12:57:37] 2025-06-06 16:57:17,851 | INFO     | did not find any defunct processes belonging to 363595
[2025-06-06 12:57:37] 2025-06-06 16:57:17,864 | INFO     | did not find any defunct processes belonging to 363595
[2025-06-06 12:57:37] 2025-06-06 16:57:17,865 | INFO     | ready for new job
[2025-06-06 12:57:37] 2025-06-06 16:57:17,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 12:57:37] 2025-06-06 16:57:17,867 | INFO     | **************************************
[2025-06-06 12:57:37] 2025-06-06 16:57:17,867 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 12:57:37] 2025-06-06 16:57:17,867 | INFO     | **************************************
[2025-06-06 12:57:37] 2025-06-06 16:57:17,868 | INFO     | 
[2025-06-06 12:57:37] 2025-06-06 16:57:17,882 | INFO     | architecture information:
[2025-06-06 12:57:37] 2025-06-06 16:57:17,883 | INFO     | executing command: cat /etc/os-release
[2025-06-06 12:57:37] 2025-06-06 16:57:17,899 | INFO     | cat /etc/os-release:
[2025-06-06 12:57:37] NAME="CentOS Linux"
[2025-06-06 12:57:37] VERSION="7 (Core)"
[2025-06-06 12:57:37] ID="centos"
[2025-06-06 12:57:37] ID_LIKE="rhel fedora"
[2025-06-06 12:57:37] VERSION_ID="7"
[2025-06-06 12:57:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 12:57:37] ANSI_COLOR="0;31"
[2025-06-06 12:57:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 12:57:37] HOME_URL="https://www.centos.org/"
[2025-06-06 12:57:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 12:57:37] 
[2025-06-06 12:57:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 12:57:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 12:57:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 12:57:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 12:57:37] 
[2025-06-06 12:57:37] 2025-06-06 16:57:17,900 | INFO     | **************************************
[2025-06-06 12:57:37] 2025-06-06 16:57:18,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 12:57:37] 2025-06-06 16:57:18,421 | INFO     | sufficient remaining disk space (76558630912 B)
[2025-06-06 12:57:37] 2025-06-06 16:57:18,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 12:57:37] 2025-06-06 16:57:18,422 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 12:57:37] 2025-06-06 16:57:18,422 | INFO     | update_server=False
[2025-06-06 12:57:37] 2025-06-06 16:57:18,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 12:57:37] 2025-06-06 16:57:18,422 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 12:57:37] 2025-06-06 16:57:18,423 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 12:57:37] 2025-06-06 16:57:18,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 12:57:37] 2025-06-06 16:57:18,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 12:57:37] 2025-06-06 16:57:18,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 12:57:37] 2025-06-06 16:57:18,514 | INFO     | all payload control threads have been joined
[2025-06-06 12:57:37] 2025-06-06 16:57:18,578 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 12:57:37] 2025-06-06 16:57:18,579 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 12:57:37] 2025-06-06 16:57:18,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:57:37] 2025-06-06 16:57:18,579 | INFO     | will abort loop
[2025-06-06 12:57:37] 2025-06-06 16:57:19,319 | INFO     | all job control threads have been joined
[2025-06-06 12:57:37] 2025-06-06 16:57:19,428 | INFO     | [job] retrieve thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:19,476 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:19,487 | INFO     | all data control threads have been joined
[2025-06-06 12:57:37] 2025-06-06 16:57:19,510 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:19,520 | INFO     | [payload] control thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:19,583 | INFO     | [job] job monitor thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:19,729 | INFO     | [job] validate thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:19,850 | INFO     | [payload] validate_post thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:20,025 | INFO     | [payload] failed_post thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:20,324 | INFO     | [job] control thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:20,492 | INFO     | [data] control thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:20,502 | INFO     | [data] copytool_out thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:20,603 | INFO     | [data] copytool_in thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:20,632 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:21,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:57:37] 2025-06-06 16:57:21,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 12:57:37] 2025-06-06 16:57:22,408 | INFO     | [job] queue monitor thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:25,418 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:29,464 | INFO     | job.realtimelogging is not enabled
[2025-06-06 12:57:37] 2025-06-06 16:57:30,470 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 12:57:37] 2025-06-06 16:57:32,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803920459584)>', '<ExcThread(monitor, started 139803433613056)>']
[2025-06-06 12:57:37] 2025-06-06 16:57:32,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 12:57:37] 2025-06-06 16:57:32,494 | INFO     | [monitor] control thread has ended
[2025-06-06 12:57:37] 2025-06-06 16:57:37,171 | INFO     | all workflow threads have been joined
[2025-06-06 12:57:37] 2025-06-06 16:57:37,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 12:57:37] 2025-06-06 16:57:37,172 | INFO     | traces error code: 0
[2025-06-06 12:57:37] 2025-06-06 16:57:37,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 12:57:37] 2025-06-06 16:57:37,307 [wrapper] ==== pilot stdout END ====
[2025-06-06 12:57:37] 2025-06-06 16:57:37,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 12:57:37] 2025-06-06 16:57:37,312 [wrapper] pilotpid: 356691
[2025-06-06 12:57:37] 2025-06-06 16:57:37,314 [wrapper] Pilot exit status: 0
[2025-06-06 12:57:37] 2025-06-06 16:57:37,329 [wrapper] pandaids: 6669623522
[2025-06-06 12:57:37] 2025-06-06 16:57:37,380 [wrapper] cleanup supervisor_pilot  671386 356692
[2025-06-06 12:57:37] 2025-06-06 16:57:37,383 [wrapper] Test setup, not cleaning
[2025-06-06 12:57:37] 2025-06-06 16:57:37,386 [wrapper] apfmon messages muted
[2025-06-06 12:57:37] 2025-06-06 16:57:37,389 [wrapper] ==== wrapper stdout END ====
[2025-06-06 12:57:37] 2025-06-06 16:57:37,391 [wrapper] ==== wrapper stderr END ====
[2025-06-06 12:57:37]  *** Error codes and diagnostics ***
[2025-06-06 12:57:37]     "exeErrorCode": 0,
[2025-06-06 12:57:37]     "exeErrorDiag": "",
[2025-06-06 12:57:37]     "pilotErrorCode": 0,
[2025-06-06 12:57:37]     "pilotErrorDiag": "",
[2025-06-06 12:57:37]  *** Listing of results directory ***
[2025-06-06 12:57:37] total 419112
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas    495897 May 29 04:32 pilot3.tar.gz
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas      5111 May 29 04:40 queuedata.json
[2025-06-06 12:57:37] -rwx------. 1 boincer umatlas     37140 May 29 04:41 runpilot2-wrapper.sh
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas       100 Jun  6 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 12:57:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 10:48 run_atlas
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas       105 Jun  6 10:48 job.xml
[2025-06-06 12:57:37] -rw-r--r--. 2 boincer umatlas 224124357 Jun  6 10:48 EVNT.44871834._003715.pool.root.1
[2025-06-06 12:57:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 10:48 start_atlas.sh
[2025-06-06 12:57:37] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 10:48 shared
[2025-06-06 12:57:37] -rw-r--r--. 2 boincer umatlas    508875 Jun  6 10:48 input.tar.gz
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas         0 Jun  6 10:48 boinc_lockfile
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas      2558 Jun  6 10:48 pandaJob.out
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas    985728 Jun  6 10:48 agis_schedconf.cvmfs.json
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas   1598969 Jun  6 10:48 agis_ddmendpoints.agis.ALL.json
[2025-06-06 12:57:37] drwx------. 4 boincer umatlas      4096 Jun  6 10:48 pilot3
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas      6658 Jun  6 12:56 init_data.xml
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas       530 Jun  6 12:56 boinc_task_state.xml
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas 199045419 Jun  6 12:56 HITS.44871837._097744.pool.root.1
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas        95 Jun  6 12:56 pilot_heartbeat.json
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas      1043 Jun  6 12:57 memory_monitor_summary.json
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas    371631 Jun  6 12:57 log.44871837._097744.job.log.tgz.1
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas      7714 Jun  6 12:57 heartbeat.json
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 12:57 boinc_mmap_file
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas        27 Jun  6 12:57 wrapper_checkpoint.txt
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas      4734 Jun  6 12:57 pilotlog.txt
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas    712739 Jun  6 12:57 log.44871837._097744.job.log.1
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas       357 Jun  6 12:57 output.list
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas       620 Jun  6 12:57 runtime_log
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas   1105920 Jun  6 12:57 result.tar.gz
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas      8651 Jun  6 12:57 runtime_log.err
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas       651 Jun  6 12:57 abtMDmL0ne7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJCeKDmsIabon.diag
[2025-06-06 12:57:37] -rw-r--r--. 1 boincer umatlas     21060 Jun  6 12:57 stderr.txt
[2025-06-06 12:57:37] HITS file was successfully produced:
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas 199045419 Jun  6 12:56 shared/HITS.pool.root.1
[2025-06-06 12:57:37]  *** Contents of shared directory: ***
[2025-06-06 12:57:37] total 414856
[2025-06-06 12:57:37] -rw-r--r--. 2 boincer umatlas 224124357 Jun  6 10:48 ATLAS.root_0
[2025-06-06 12:57:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 10:48 start_atlas.sh
[2025-06-06 12:57:37] -rw-r--r--. 2 boincer umatlas    508875 Jun  6 10:48 input.tar.gz
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas 199045419 Jun  6 12:56 HITS.pool.root.1
[2025-06-06 12:57:37] -rw-------. 1 boincer umatlas   1105920 Jun  6 12:57 result.tar.gz
12:57:38 (353122): run_atlas exited; CPU time 60384.220288
12:57:38 (353122): called boinc_finish(0)

</stderr_txt>
]]>

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