Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:50 (20463): wrapper (7.7.26015): starting
10:42:50 (20463): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 10:42:50] Arguments: --nthreads 8
[2025-06-06 10:42:50] Threads: 8
[2025-06-06 10:42:50] Checking for CVMFS
[2025-06-06 10:42:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 10:42:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 10:42:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 10:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 10:42:51] 2.11.2.0 2692 25975 95548 146865 3 1 19590425 20275200 1 130560 0 9361359 99.958 4979947 6342 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 10:42:51] CVMFS is ok
[2025-06-06 10:42:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 10:42:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 10:42:51] Further information can be found at the LHC@home message board.
[2025-06-06 10:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 10:42:51] Checking for apptainer binary...
[2025-06-06 10:42:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 10:42:51] Running /usr/bin/apptainer --version
[2025-06-06 10:42:51] apptainer version 1.3.2-1.el7
[2025-06-06 10:42:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 10:42:53] c-204-1.aglt2.org
[2025-06-06 10:42:53] apptainer works
[2025-06-06 10:42:53] Set ATHENA_PROC_NUMBER=8
[2025-06-06 10:42:53] Set ATHENA_CORE_NUMBER=8
[2025-06-06 10:42:53] Starting ATLAS job with PandaID=6677618660
[2025-06-06 10:42:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 12:36:03]  *** The last 200 lines of the pilot log: ***
[2025-06-06 12:36:03] 2025-06-06 16:35:49,271 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 12:36:03] 2025-06-06 16:35:49,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 12:36:03] 2025-06-06 16:35:49,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 12:36:03] 2025-06-06 16:35:49,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 12:36:03] 2025-06-06 16:35:49,275 | INFO     | fitting pss+swap vs Time
[2025-06-06 12:36:03] 2025-06-06 16:35:49,276 | INFO     | sum of square deviations: 424045160.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,277 | INFO     | sum of deviations: -4568791786.000004
[2025-06-06 12:36:03] 2025-06-06 16:35:49,277 | INFO     | mean x: 1749224378.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,277 | INFO     | mean y: 2479102.5675675673
[2025-06-06 12:36:03] 2025-06-06 16:35:49,277 | INFO     | -- intersect: 18849155645.408817
[2025-06-06 12:36:03] 2025-06-06 16:35:49,277 | INFO     | intersect: 18849155645.408817
[2025-06-06 12:36:03] 2025-06-06 16:35:49,278 | INFO     | chi2: 2.4267072874212605
[2025-06-06 12:36:03] 2025-06-06 16:35:49,278 | INFO     | sum of square deviations: 369281342.5
[2025-06-06 12:36:03] 2025-06-06 16:35:49,279 | INFO     | sum of deviations: 2879514028.0000024
[2025-06-06 12:36:03] 2025-06-06 16:35:49,279 | INFO     | mean x: 1749224225.5
[2025-06-06 12:36:03] 2025-06-06 16:35:49,279 | INFO     | mean y: 2499109.113207547
[2025-06-06 12:36:03] 2025-06-06 16:35:49,279 | INFO     | -- intersect: -13637279335.541601
[2025-06-06 12:36:03] 2025-06-06 16:35:49,279 | INFO     | intersect: -13637279335.541601
[2025-06-06 12:36:03] 2025-06-06 16:35:49,279 | INFO     | chi2: 1.6735983853001364
[2025-06-06 12:36:03] 2025-06-06 16:35:49,280 | INFO     | current chi2=1.6735983853001364 (change=31.034188013726823 %)
[2025-06-06 12:36:03] 2025-06-06 16:35:49,280 | INFO     | sum of square deviations: 319447850.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,281 | INFO     | sum of deviations: 2961756606.999997
[2025-06-06 12:36:03] 2025-06-06 16:35:49,281 | INFO     | mean x: 1749224073.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,281 | INFO     | mean y: 2499361.881188119
[2025-06-06 12:36:03] 2025-06-06 16:35:49,281 | INFO     | -- intersect: -16215408992.584795
[2025-06-06 12:36:03] 2025-06-06 16:35:49,281 | INFO     | intersect: -16215408992.584795
[2025-06-06 12:36:03] 2025-06-06 16:35:49,281 | INFO     | chi2: 1.6763914804522455
[2025-06-06 12:36:03] 2025-06-06 16:35:49,282 | INFO     | current chi2=1.6763914804522455 (change=-0.16689160175117065 %)
[2025-06-06 12:36:03] 2025-06-06 16:35:49,282 | INFO     | right removable region: 100
[2025-06-06 12:36:03] 2025-06-06 16:35:49,282 | INFO     | sum of square deviations: 369281342.5
[2025-06-06 12:36:03] 2025-06-06 16:35:49,283 | INFO     | sum of deviations: -21049759921.5
[2025-06-06 12:36:03] 2025-06-06 16:35:49,283 | INFO     | mean x: 1749224530.5
[2025-06-06 12:36:03] 2025-06-06 16:35:49,283 | INFO     | mean y: 2524018.3113207547
[2025-06-06 12:36:03] 2025-06-06 16:35:49,283 | INFO     | -- intersect: 99711748878.00906
[2025-06-06 12:36:03] 2025-06-06 16:35:49,283 | INFO     | intersect: 99711748878.00906
[2025-06-06 12:36:03] 2025-06-06 16:35:49,284 | INFO     | chi2: 0.9205938988145048
[2025-06-06 12:36:03] 2025-06-06 16:35:49,284 | INFO     | current chi2=0.9205938988145048 (change=62.06407325735716 %)
[2025-06-06 12:36:03] 2025-06-06 16:35:49,284 | INFO     | sum of square deviations: 319447850.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,285 | INFO     | sum of deviations: -19920181228.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,285 | INFO     | mean x: 1749224683.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,285 | INFO     | mean y: 2520387.1386138615
[2025-06-06 12:36:03] 2025-06-06 16:35:49,285 | INFO     | -- intersect: 109080958992.53493
[2025-06-06 12:36:03] 2025-06-06 16:35:49,285 | INFO     | intersect: 109080958992.53493
[2025-06-06 12:36:03] 2025-06-06 16:35:49,285 | INFO     | chi2: 0.9034417706648235
[2025-06-06 12:36:03] 2025-06-06 16:35:49,285 | INFO     | current chi2=0.9034417706648235 (change=1.863159007654627 %)
[2025-06-06 12:36:03] 2025-06-06 16:35:49,286 | INFO     | left removable region: 20
[2025-06-06 12:36:03] 2025-06-06 16:35:49,286 | INFO     | sum of square deviations: 158737860.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,286 | INFO     | sum of deviations: -5800008283.0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,286 | INFO     | mean x: 1749224652.5
[2025-06-06 12:36:03] 2025-06-06 16:35:49,286 | INFO     | mean y: 2521549.175
[2025-06-06 12:36:03] 2025-06-06 16:35:49,287 | INFO     | -- intersect: 63916180668.22698
[2025-06-06 12:36:03] 2025-06-06 16:35:49,287 | INFO     | intersect: 63916180668.22698
[2025-06-06 12:36:03] 2025-06-06 16:35:49,287 | INFO     | chi2: 0.07746351320711652
[2025-06-06 12:36:03] 2025-06-06 16:35:49,287 | INFO     | -- intersect: 63916180668.22698
[2025-06-06 12:36:03] 2025-06-06 16:35:49,287 | INFO     | current memory leak: -36.54 B/s (using 80 data points, chi2=0.08)
[2025-06-06 12:36:03] 2025-06-06 16:35:49,288 | INFO     | ..............................
[2025-06-06 12:36:03] 2025-06-06 16:35:49,288 | INFO     | . Timing measurements:
[2025-06-06 12:36:03] 2025-06-06 16:35:49,288 | INFO     | . get job = 0 s
[2025-06-06 12:36:03] 2025-06-06 16:35:49,288 | INFO     | . initial setup = 3 s
[2025-06-06 12:36:03] 2025-06-06 16:35:49,288 | INFO     | . payload setup = 11 s
[2025-06-06 12:36:03] 2025-06-06 16:35:49,288 | INFO     | . stage-in = 0 s
[2025-06-06 12:36:03] 2025-06-06 16:35:49,288 | INFO     | . payload execution = 6718 s
[2025-06-06 12:36:03] 2025-06-06 16:35:49,288 | INFO     | . stage-out = 0 s
[2025-06-06 12:36:03] 2025-06-06 16:35:49,289 | INFO     | . log creation = 0 s
[2025-06-06 12:36:03] 2025-06-06 16:35:49,289 | INFO     | ..............................
[2025-06-06 12:36:03] 2025-06-06 16:35:49,393 | INFO     | 
[2025-06-06 12:36:03] 2025-06-06 16:35:49,394 | INFO     | job summary report
[2025-06-06 12:36:03] 2025-06-06 16:35:49,394 | INFO     | --------------------------------------------------
[2025-06-06 12:36:03] 2025-06-06 16:35:49,394 | INFO     | PanDA job id: 6677618660
[2025-06-06 12:36:03] 2025-06-06 16:35:49,394 | INFO     | task id: 45006595
[2025-06-06 12:36:03] 2025-06-06 16:35:49,394 | INFO     | errors: (none)
[2025-06-06 12:36:03] 2025-06-06 16:35:49,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 12:36:03] 2025-06-06 16:35:49,395 | INFO     | pilot state: finished 
[2025-06-06 12:36:03] 2025-06-06 16:35:49,395 | INFO     | transexitcode: 0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,395 | INFO     | exeerrorcode: 0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,395 | INFO     | exeerrordiag: 
[2025-06-06 12:36:03] 2025-06-06 16:35:49,395 | INFO     | exitcode: 0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,395 | INFO     | exitmsg: OK
[2025-06-06 12:36:03] 2025-06-06 16:35:49,396 | INFO     | cpuconsumptiontime: 49172 s
[2025-06-06 12:36:03] 2025-06-06 16:35:49,396 | INFO     | nevents: 400
[2025-06-06 12:36:03] 2025-06-06 16:35:49,396 | INFO     | neventsw: 0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,396 | INFO     | pid: 30680
[2025-06-06 12:36:03] 2025-06-06 16:35:49,396 | INFO     | pgrp: 30680
[2025-06-06 12:36:03] 2025-06-06 16:35:49,396 | INFO     | corecount: 8
[2025-06-06 12:36:03] 2025-06-06 16:35:49,396 | INFO     | event service: False
[2025-06-06 12:36:03] 2025-06-06 16:35:49,396 | INFO     | sizes: {0: 2396514, 1: 2397370, 7: 2397576, 12: 2397604, 6733: 2424588, 6735: 2433529, 6736: 2433713, 6742: 2433883}
[2025-06-06 12:36:03] 2025-06-06 16:35:49,397 | INFO     | --------------------------------------------------
[2025-06-06 12:36:03] 2025-06-06 16:35:49,397 | INFO     | 
[2025-06-06 12:36:03] 2025-06-06 16:35:49,397 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 12:36:03] 2025-06-06 16:35:49,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,444 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,444 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 12:36:03] 2025-06-06 16:35:49,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 12:36:03] 2025-06-06 16:35:49,448 | INFO     | job 6677618660 has completed (purged errors)
[2025-06-06 12:36:03] 2025-06-06 16:35:49,448 | INFO     | overall cleanup function is called
[2025-06-06 12:36:03] 2025-06-06 16:35:50,456 | INFO     | --- collectZombieJob: --- 10, [30680]
[2025-06-06 12:36:03] 2025-06-06 16:35:50,456 | INFO     | zombie collector waiting for pid 30680
[2025-06-06 12:36:03] 2025-06-06 16:35:50,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 12:36:03] 2025-06-06 16:35:50,457 | INFO     | collected zombie processes
[2025-06-06 12:36:03] 2025-06-06 16:35:50,457 | INFO     | will attempt to kill all subprocesses of pid=30680
[2025-06-06 12:36:03] 2025-06-06 16:35:50,527 | INFO     | process IDs to be killed: [30680] (in reverse order)
[2025-06-06 12:36:03] 2025-06-06 16:35:50,579 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 12:36:03] 2025-06-06 16:35:50,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 12:36:03] 2025-06-06 16:35:50,583 | INFO     | did not find any defunct processes belonging to 30680
[2025-06-06 12:36:03] 2025-06-06 16:35:50,586 | INFO     | did not find any defunct processes belonging to 30680
[2025-06-06 12:36:03] 2025-06-06 16:35:50,586 | INFO     | ready for new job
[2025-06-06 12:36:03] 2025-06-06 16:35:50,586 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 12:36:03] 2025-06-06 16:35:50,588 | INFO     | **************************************
[2025-06-06 12:36:03] 2025-06-06 16:35:50,588 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 12:36:03] 2025-06-06 16:35:50,588 | INFO     | **************************************
[2025-06-06 12:36:03] 2025-06-06 16:35:50,588 | INFO     | 
[2025-06-06 12:36:03] 2025-06-06 16:35:50,589 | INFO     | architecture information:
[2025-06-06 12:36:03] 2025-06-06 16:35:50,590 | INFO     | executing command: cat /etc/os-release
[2025-06-06 12:36:03] 2025-06-06 16:35:50,608 | INFO     | cat /etc/os-release:
[2025-06-06 12:36:03] NAME="CentOS Linux"
[2025-06-06 12:36:03] VERSION="7 (Core)"
[2025-06-06 12:36:03] ID="centos"
[2025-06-06 12:36:03] ID_LIKE="rhel fedora"
[2025-06-06 12:36:03] VERSION_ID="7"
[2025-06-06 12:36:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 12:36:03] ANSI_COLOR="0;31"
[2025-06-06 12:36:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 12:36:03] HOME_URL="https://www.centos.org/"
[2025-06-06 12:36:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 12:36:03] 
[2025-06-06 12:36:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 12:36:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 12:36:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 12:36:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 12:36:03] 
[2025-06-06 12:36:03] 2025-06-06 16:35:50,608 | INFO     | **************************************
[2025-06-06 12:36:03] 2025-06-06 16:35:51,112 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 12:36:03] 2025-06-06 16:35:51,131 | INFO     | sufficient remaining disk space (18645778432 B)
[2025-06-06 12:36:03] 2025-06-06 16:35:51,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 12:36:03] 2025-06-06 16:35:51,132 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 12:36:03] 2025-06-06 16:35:51,132 | INFO     | update_server=False
[2025-06-06 12:36:03] 2025-06-06 16:35:51,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 12:36:03] 2025-06-06 16:35:51,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:36:03] 2025-06-06 16:35:51,133 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 12:36:03] 2025-06-06 16:35:51,133 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 12:36:03] 2025-06-06 16:35:51,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 12:36:03] 2025-06-06 16:35:51,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 12:36:03] 2025-06-06 16:35:51,392 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 12:36:03] 2025-06-06 16:35:51,393 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 12:36:03] 2025-06-06 16:35:51,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:36:03] 2025-06-06 16:35:51,394 | INFO     | will abort loop
[2025-06-06 12:36:03] 2025-06-06 16:35:52,113 | INFO     | all payload control threads have been joined
[2025-06-06 12:36:03] 2025-06-06 16:35:52,138 | INFO     | [job] retrieve thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:52,138 | INFO     | [job] queue monitor thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:52,224 | INFO     | all data control threads have been joined
[2025-06-06 12:36:03] 2025-06-06 16:35:52,225 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:52,315 | INFO     | [payload] validate_post thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:52,399 | INFO     | [job] job monitor thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:52,486 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:52,489 | INFO     | [data] copytool_in thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:52,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 12:36:03] 2025-06-06 16:35:52,533 | INFO     | all job control threads have been joined
[2025-06-06 12:36:03] 2025-06-06 16:35:53,026 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:53,049 | INFO     | [payload] failed_post thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:53,119 | INFO     | [payload] control thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:53,146 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:53,230 | INFO     | [data] control thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:53,402 | INFO     | [job] validate thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:53,539 | INFO     | [job] control thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:53,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 12:36:03] 2025-06-06 16:35:54,523 | INFO     | [data] copytool_out thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:57,763 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 12:36:03] 2025-06-06 16:35:58,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569891592000)>', '<ExcThread(monitor, started 140569154144000)>']
[2025-06-06 12:36:03] 2025-06-06 16:35:59,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 12:36:03] 2025-06-06 16:35:59,171 | INFO     | [monitor] control thread has ended
[2025-06-06 12:36:03] 2025-06-06 16:36:03,295 | INFO     | all workflow threads have been joined
[2025-06-06 12:36:03] 2025-06-06 16:36:03,301 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 12:36:03] 2025-06-06 16:36:03,302 | INFO     | traces error code: 0
[2025-06-06 12:36:03] 2025-06-06 16:36:03,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 12:36:03] 2025-06-06 16:36:03,429 [wrapper] ==== pilot stdout END ====
[2025-06-06 12:36:03] 2025-06-06 16:36:03,434 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 12:36:03] 2025-06-06 16:36:03,438 [wrapper] pilotpid: 24175
[2025-06-06 12:36:03] 2025-06-06 16:36:03,442 [wrapper] Pilot exit status: 0
[2025-06-06 12:36:03] 2025-06-06 16:36:03,459 [wrapper] pandaids: 6677618660
[2025-06-06 12:36:03] 2025-06-06 16:36:03,503 [wrapper] cleanup supervisor_pilot  8575 24176
[2025-06-06 12:36:03] 2025-06-06 16:36:03,508 [wrapper] Test setup, not cleaning
[2025-06-06 12:36:03] 2025-06-06 16:36:03,513 [wrapper] apfmon messages muted
[2025-06-06 12:36:03] 2025-06-06 16:36:03,518 [wrapper] ==== wrapper stdout END ====
[2025-06-06 12:36:03] 2025-06-06 16:36:03,523 [wrapper] ==== wrapper stderr END ====
[2025-06-06 12:36:03]  *** Error codes and diagnostics ***
[2025-06-06 12:36:03]     "exeErrorCode": 0,
[2025-06-06 12:36:03]     "exeErrorDiag": "",
[2025-06-06 12:36:03]     "pilotErrorCode": 0,
[2025-06-06 12:36:03]     "pilotErrorDiag": "",
[2025-06-06 12:36:03]  *** Listing of results directory ***
[2025-06-06 12:36:03] total 388540
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer      5111 Jun  3 08:27 queuedata.json
[2025-06-06 12:36:03] -rwx------ 1 boincer boincer     37140 Jun  3 08:28 runpilot2-wrapper.sh
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer       100 Jun  6 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 12:36:03] -rwxr-xr-x 1 boincer boincer      7986 Jun  6 10:42 run_atlas
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer       105 Jun  6 10:42 job.xml
[2025-06-06 12:36:03] -rw-r--r-- 2 boincer boincer 215740649 Jun  6 10:42 EVNT.45006593._001303.pool.root.1
[2025-06-06 12:36:03] -rw-r--r-- 2 boincer boincer     15093 Jun  6 10:42 start_atlas.sh
[2025-06-06 12:36:03] drwxrwx--x 2 boincer boincer      4096 Jun  6 10:42 shared
[2025-06-06 12:36:03] -rw-r--r-- 2 boincer boincer    508883 Jun  6 10:42 input.tar.gz
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer         0 Jun  6 10:42 boinc_lockfile
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer      2525 Jun  6 10:42 pandaJob.out
[2025-06-06 12:36:03] -rw------- 1 boincer boincer    985728 Jun  6 10:43 agis_schedconf.cvmfs.json
[2025-06-06 12:36:03] -rw------- 1 boincer boincer   1598969 Jun  6 10:43 agis_ddmendpoints.agis.ALL.json
[2025-06-06 12:36:03] drwx------ 4 boincer boincer      4096 Jun  6 10:43 pilot3
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer      5823 Jun  6 12:31 init_data.xml
[2025-06-06 12:36:03] -rw------- 1 boincer boincer 176387698 Jun  6 12:35 HITS.45006595._032375.pool.root.1
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer       529 Jun  6 12:35 boinc_task_state.xml
[2025-06-06 12:36:03] -rw------- 1 boincer boincer        95 Jun  6 12:35 pilot_heartbeat.json
[2025-06-06 12:36:03] -rw------- 1 boincer boincer      1048 Jun  6 12:35 memory_monitor_summary.json
[2025-06-06 12:36:03] -rw------- 1 boincer boincer    321244 Jun  6 12:35 log.45006595._032375.job.log.tgz.1
[2025-06-06 12:36:03] -rw------- 1 boincer boincer      7743 Jun  6 12:35 heartbeat.json
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer      8192 Jun  6 12:35 boinc_mmap_file
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer        27 Jun  6 12:35 wrapper_checkpoint.txt
[2025-06-06 12:36:03] -rw------- 1 boincer boincer      4662 Jun  6 12:36 pilotlog.txt
[2025-06-06 12:36:03] -rw------- 1 boincer boincer    628724 Jun  6 12:36 log.45006595._032375.job.log.1
[2025-06-06 12:36:03] -rw------- 1 boincer boincer       357 Jun  6 12:36 output.list
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer       620 Jun  6 12:36 runtime_log
[2025-06-06 12:36:03] -rw------- 1 boincer boincer    972800 Jun  6 12:36 result.tar.gz
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer      8654 Jun  6 12:36 runtime_log.err
[2025-06-06 12:36:03] -rw------- 1 boincer boincer       659 Jun  6 12:36 PqKLDmbvfg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhcYKDmAhxJem.diag
[2025-06-06 12:36:03] -rw-r--r-- 1 boincer boincer     20787 Jun  6 12:36 stderr.txt
[2025-06-06 12:36:03] HITS file was successfully produced:
[2025-06-06 12:36:03] -rw------- 1 boincer boincer 176387698 Jun  6 12:35 shared/HITS.pool.root.1
[2025-06-06 12:36:03]  *** Contents of shared directory: ***
[2025-06-06 12:36:03] total 384416
[2025-06-06 12:36:03] -rw-r--r-- 2 boincer boincer 215740649 Jun  6 10:42 ATLAS.root_0
[2025-06-06 12:36:03] -rw-r--r-- 2 boincer boincer     15093 Jun  6 10:42 start_atlas.sh
[2025-06-06 12:36:03] -rw-r--r-- 2 boincer boincer    508883 Jun  6 10:42 input.tar.gz
[2025-06-06 12:36:03] -rw------- 1 boincer boincer 176387698 Jun  6 12:35 HITS.pool.root.1
[2025-06-06 12:36:03] -rw------- 1 boincer boincer    972800 Jun  6 12:36 result.tar.gz
12:36:04 (20463): run_atlas exited; CPU time 49094.239163
12:36:04 (20463): called boinc_finish(0)

</stderr_txt>
]]>

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