Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:23:32 (771628): wrapper (7.7.26015): starting
10:23:32 (771628): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 10:23:32] Arguments: --nthreads 8
[2025-06-06 10:23:32] Threads: 8
[2025-06-06 10:23:32] Checking for CVMFS
[2025-06-06 10:23:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 10:23:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 10:23:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 10:23:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 10:23:33] 2.12.6.0 1594372 26509 420348 146863 3 26 27303874 32935937 20636 16776704 0 206080057 99.650 198690767 18159 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 10:23:33] CVMFS is ok
[2025-06-06 10:23:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 10:23:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 10:23:33] Further information can be found at the LHC@home message board.
[2025-06-06 10:23:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 10:23:33] Checking for apptainer binary...
[2025-06-06 10:23:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 10:23:33] Running /usr/bin/apptainer --version
[2025-06-06 10:23:33] apptainer version 1.4.1-1.el9
[2025-06-06 10:23:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 10:23:33] c7-4-31.aglt2.org
[2025-06-06 10:23:33] apptainer works
[2025-06-06 10:23:33] Set ATHENA_PROC_NUMBER=8
[2025-06-06 10:23:33] Set ATHENA_CORE_NUMBER=8
[2025-06-06 10:23:33] Starting ATLAS job with PandaID=6669512559
[2025-06-06 10:23:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:52:24]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:52:24]  guid=3145f002-6386-45ff-bc78-a74118689757
[2025-06-06 11:52:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 11:52:24]  is_altstaged=None
[2025-06-06 11:52:24]  is_tar=False
[2025-06-06 11:52:24]  lfn=log.44871837._097358.job.log.tgz.1
[2025-06-06 11:52:24]  mtime=0
[2025-06-06 11:52:24]  protocol_id=None
[2025-06-06 11:52:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 11:52:24]  replicas=None
[2025-06-06 11:52:24]  scope=mc23_13p6TeV
[2025-06-06 11:52:24]  status=None
[2025-06-06 11:52:24]  status_code=0
[2025-06-06 11:52:24]  storage_token=
[2025-06-06 11:52:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669512559/log.44871837._097358.job.log.tgz.1
[2025-06-06 11:52:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/a5/log.44871837._097358.job.log.tgz.1
[2025-06-06 11:52:24]  workdir=None
[2025-06-06 11:52:24] ]
[2025-06-06 11:52:24] 2025-06-06 15:52:07,759 | INFO     | transferring file log.44871837._097358.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669512559/log.44871837._097358.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 11:52:24] 2025-06-06 15:52:07,759 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669512559/log.44871837._097358.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._097358.job
[2025-06-06 11:52:24] 2025-06-06 15:52:07,781 | INFO     | adding to output.list: log.44871837._097358.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/a5/log.44871837._097358.job.log.tg
[2025-06-06 11:52:24] 2025-06-06 15:52:07,782 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 11:52:24] 2025-06-06 15:52:07,782 | INFO     | summary of transferred files:
[2025-06-06 11:52:24] 2025-06-06 15:52:07,782 | INFO     |  -- lfn=log.44871837._097358.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 11:52:24] 2025-06-06 15:52:07,782 | INFO     | stage-out finished correctly
[2025-06-06 11:52:24] 2025-06-06 15:52:08,175 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 11:52:24] 2025-06-06 15:52:08,249 | INFO     | job 6669512559 has state=finished
[2025-06-06 11:52:24] 2025-06-06 15:52:08,250 | INFO     | preparing for final server update for job 6669512559 in state='finished'
[2025-06-06 11:52:24] 2025-06-06 15:52:08,305 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-06 11:52:24] 2025-06-06 15:52:08,305 | INFO     | this job has now completed (state=finished)
[2025-06-06 11:52:24] 2025-06-06 15:52:08,306 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 11:52:24] 2025-06-06 15:52:08,306 | INFO     | log transfer has been attempted: DONE
[2025-06-06 11:52:24] 2025-06-06 15:52:08,306 | INFO     | job 6669512559 has finished - writing final server update
[2025-06-06 11:52:24] 2025-06-06 15:52:08,306 | INFO     | total number of processed events: 400 (read)
[2025-06-06 11:52:24] 2025-06-06 15:52:08,327 | INFO     | executing command: lscpu
[2025-06-06 11:52:24] 2025-06-06 15:52:08,419 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 11:52:24] 2025-06-06 15:52:08,599 | WARNING  | process 793189 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 11:52:24] 2025-06-06 15:52:08,599 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669512559/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:52:24] 2025-06-06 15:52:08,991 | INFO     | number of running child processes to parent process 793189: 1
[2025-06-06 11:52:24] 2025-06-06 15:52:08,992 | INFO     | maximum number of monitored processes: 6
[2025-06-06 11:52:24] 2025-06-06 15:52:11,494 | INFO     | monitor loop #385: job 0:6669512559 is in state 'finished'
[2025-06-06 11:52:24] 2025-06-06 15:52:11,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:52:24] 2025-06-06 15:52:11,866 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 11:52:24] 2025-06-06 15:52:11,867 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669512559/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:52:24] 2025-06-06 15:52:11,867 | INFO     | extracted standard info from prmon json
[2025-06-06 11:52:24] 2025-06-06 15:52:11,867 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:52:24] 2025-06-06 15:52:11,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:52:24] 2025-06-06 15:52:11,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:52:24] 2025-06-06 15:52:11,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | sum of square deviations: 158737860.0
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | sum of deviations: -10512374183.0
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | mean x: 1749222570.5
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | mean y: 2285404.1
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | -- intersect: 115844102790.60817
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | intersect: 115844102790.60817
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | chi2: 0.18596624462405756
[2025-06-06 11:52:24] 2025-06-06 15:52:11,870 | INFO     | -- intersect: 115844102790.60817
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | current memory leak: -66.22 B/s (using 80 data points, chi2=0.19)
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | ..............................
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | . Timing measurements:
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | . get job = 0 s
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | . initial setup = 3 s
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | . payload setup = 8 s
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | . stage-in = 0 s
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | . payload execution = 5273 s
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | . stage-out = 0 s
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | . log creation = 0 s
[2025-06-06 11:52:24] 2025-06-06 15:52:11,871 | INFO     | ..............................
[2025-06-06 11:52:24] 2025-06-06 15:52:11,942 | INFO     | 
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | job summary report
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | --------------------------------------------------
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | PanDA job id: 6669512559
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | task id: 44871837
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | errors: (none)
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | pilot state: finished 
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | transexitcode: 0
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | exeerrorcode: 0
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | exeerrordiag: 
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | exitcode: 0
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | exitmsg: OK
[2025-06-06 11:52:24] 2025-06-06 15:52:11,943 | INFO     | cpuconsumptiontime: 38883 s
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | nevents: 400
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | neventsw: 0
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | pid: 793189
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | pgrp: 793189
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | corecount: 8
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | event service: False
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 12: 2397654, 5285: 2423835, 5286: 2432960, 5290: 2433074}
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | --------------------------------------------------
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | 
[2025-06-06 11:52:24] 2025-06-06 15:52:11,944 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 11:52:24] 2025-06-06 15:52:11,965 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,966 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:52:24] 2025-06-06 15:52:11,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:52:24] 2025-06-06 15:52:11,967 | INFO     | job 6669512559 has completed (purged errors)
[2025-06-06 11:52:24] 2025-06-06 15:52:11,967 | INFO     | overall cleanup function is called
[2025-06-06 11:52:24] 2025-06-06 15:52:12,974 | INFO     | --- collectZombieJob: --- 10, [793189]
[2025-06-06 11:52:24] 2025-06-06 15:52:12,975 | INFO     | zombie collector waiting for pid 793189
[2025-06-06 11:52:24] 2025-06-06 15:52:12,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:52:24] 2025-06-06 15:52:12,975 | INFO     | collected zombie processes
[2025-06-06 11:52:24] 2025-06-06 15:52:12,975 | INFO     | will attempt to kill all subprocesses of pid=793189
[2025-06-06 11:52:24] 2025-06-06 15:52:13,345 | INFO     | process IDs to be killed: [793189] (in reverse order)
[2025-06-06 11:52:24] 2025-06-06 15:52:13,474 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:52:24] 2025-06-06 15:52:13,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:52:24] 2025-06-06 15:52:13,490 | INFO     | did not find any defunct processes belonging to 793189
[2025-06-06 11:52:24] 2025-06-06 15:52:13,506 | INFO     | did not find any defunct processes belonging to 793189
[2025-06-06 11:52:24] 2025-06-06 15:52:13,506 | INFO     | ready for new job
[2025-06-06 11:52:24] 2025-06-06 15:52:13,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:52:24] 2025-06-06 15:52:13,508 | INFO     | **************************************
[2025-06-06 11:52:24] 2025-06-06 15:52:13,508 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:52:24] 2025-06-06 15:52:13,508 | INFO     | **************************************
[2025-06-06 11:52:24] 2025-06-06 15:52:13,508 | INFO     | 
[2025-06-06 11:52:24] 2025-06-06 15:52:13,526 | INFO     | architecture information:
[2025-06-06 11:52:24] 2025-06-06 15:52:13,527 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:52:24] 2025-06-06 15:52:13,544 | INFO     | cat /etc/os-release:
[2025-06-06 11:52:24] NAME="CentOS Linux"
[2025-06-06 11:52:24] VERSION="7 (Core)"
[2025-06-06 11:52:24] ID="centos"
[2025-06-06 11:52:24] ID_LIKE="rhel fedora"
[2025-06-06 11:52:24] VERSION_ID="7"
[2025-06-06 11:52:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:52:24] ANSI_COLOR="0;31"
[2025-06-06 11:52:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:52:24] HOME_URL="https://www.centos.org/"
[2025-06-06 11:52:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:52:24] 
[2025-06-06 11:52:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:52:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:52:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:52:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:52:24] 
[2025-06-06 11:52:24] 2025-06-06 15:52:13,544 | INFO     | **************************************
[2025-06-06 11:52:24] 2025-06-06 15:52:14,047 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 11:52:24] 2025-06-06 15:52:14,065 | INFO     | sufficient remaining disk space (76621545472 B)
[2025-06-06 11:52:24] 2025-06-06 15:52:14,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:52:24] 2025-06-06 15:52:14,066 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:52:24] 2025-06-06 15:52:14,066 | INFO     | update_server=False
[2025-06-06 11:52:24] 2025-06-06 15:52:14,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:52:24] 2025-06-06 15:52:14,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:52:24] 2025-06-06 15:52:14,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:52:24] 2025-06-06 15:52:14,398 | INFO     | all job control threads have been joined
[2025-06-06 11:52:24] 2025-06-06 15:52:14,674 | INFO     | all payload control threads have been joined
[2025-06-06 11:52:24] 2025-06-06 15:52:14,992 | INFO     | all data control threads have been joined
[2025-06-06 11:52:24] 2025-06-06 15:52:15,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:52:24] 2025-06-06 15:52:15,003 | INFO     | aborting loop
[2025-06-06 11:52:24] 2025-06-06 15:52:15,047 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:52:24] 2025-06-06 15:52:15,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:52:24] 2025-06-06 15:52:15,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:52:24] 2025-06-06 15:52:15,070 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:15,265 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:15,404 | INFO     | [job] control thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:15,540 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:15,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:15,667 | INFO     | [job] validate thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:15,679 | INFO     | [payload] control thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:15,997 | INFO     | [data] control thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:15,999 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:16,007 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:16,026 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:16,057 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:16,067 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:16,162 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:16,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:52:24] 2025-06-06 15:52:17,955 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:18,261 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:52:24] 2025-06-06 15:52:18,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140580701960000)>', '<ExcThread(monitor, started 140580344538880)>']
[2025-06-06 11:52:24] 2025-06-06 15:52:19,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:52:24] 2025-06-06 15:52:19,066 | INFO     | [monitor] control thread has ended
[2025-06-06 11:52:24] 2025-06-06 15:52:23,950 | INFO     | all workflow threads have been joined
[2025-06-06 11:52:24] 2025-06-06 15:52:23,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:52:24] 2025-06-06 15:52:23,951 | INFO     | traces error code: 0
[2025-06-06 11:52:24] 2025-06-06 15:52:23,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:52:24] 2025-06-06 15:52:24,072 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:52:24] 2025-06-06 15:52:24,074 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:52:24] 2025-06-06 15:52:24,076 [wrapper] pilotpid: 777365
[2025-06-06 11:52:24] 2025-06-06 15:52:24,078 [wrapper] Pilot exit status: 0
[2025-06-06 11:52:24] 2025-06-06 15:52:24,089 [wrapper] pandaids: 6669512559
[2025-06-06 11:52:24] 2025-06-06 15:52:24,152 [wrapper] cleanup supervisor_pilot 1126598 777366
[2025-06-06 11:52:24] 2025-06-06 15:52:24,155 [wrapper] Test setup, not cleaning
[2025-06-06 11:52:24] 2025-06-06 15:52:24,157 [wrapper] apfmon messages muted
[2025-06-06 11:52:24] 2025-06-06 15:52:24,160 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:52:24] 2025-06-06 15:52:24,162 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:52:24]  *** Error codes and diagnostics ***
[2025-06-06 11:52:24]     "exeErrorCode": 0,
[2025-06-06 11:52:24]     "exeErrorDiag": "",
[2025-06-06 11:52:24]     "pilotErrorCode": 0,
[2025-06-06 11:52:24]     "pilotErrorDiag": "",
[2025-06-06 11:52:24]  *** Listing of results directory ***
[2025-06-06 11:52:24] total 409944
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas    495897 May 29 04:10 pilot3.tar.gz
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas      5111 May 29 04:10 queuedata.json
[2025-06-06 11:52:24] -rwx------. 1 boincer umatlas     37140 May 29 04:11 runpilot2-wrapper.sh
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas       100 Jun  6 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:52:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 10:23 run_atlas
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas       105 Jun  6 10:23 job.xml
[2025-06-06 11:52:24] -rw-r--r--. 2 boincer umatlas 224063869 Jun  6 10:23 EVNT.44871834._003834.pool.root.1
[2025-06-06 11:52:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 10:23 start_atlas.sh
[2025-06-06 11:52:24] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 10:23 shared
[2025-06-06 11:52:24] -rw-r--r--. 2 boincer umatlas    508877 Jun  6 10:23 input.tar.gz
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas         0 Jun  6 10:23 boinc_lockfile
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 10:23 pandaJob.out
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas    985728 Jun  6 10:23 agis_schedconf.cvmfs.json
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas   1598969 Jun  6 10:23 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:52:24] drwx------. 4 boincer umatlas      4096 Jun  6 10:23 pilot3
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas      6932 Jun  6 11:50 init_data.xml
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas        95 Jun  6 11:51 pilot_heartbeat.json
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas       529 Jun  6 11:51 boinc_task_state.xml
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas 190244017 Jun  6 11:51 HITS.44871837._097358.pool.root.1
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas      1041 Jun  6 11:52 memory_monitor_summary.json
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas    315689 Jun  6 11:52 log.44871837._097358.job.log.tgz.1
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas      7706 Jun  6 11:52 heartbeat.json
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 11:52 boinc_mmap_file
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas        27 Jun  6 11:52 wrapper_checkpoint.txt
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas      4353 Jun  6 11:52 pilotlog.txt
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas    509238 Jun  6 11:52 log.44871837._097358.job.log.1
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas       357 Jun  6 11:52 output.list
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas       620 Jun  6 11:52 runtime_log
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas    839680 Jun  6 11:52 result.tar.gz
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas       655 Jun  6 11:52 UguMDmbXne7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm88dKDmnirK1m.diag
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas      8654 Jun  6 11:52 runtime_log.err
[2025-06-06 11:52:24] -rw-r--r--. 1 boincer umatlas     21292 Jun  6 11:52 stderr.txt
[2025-06-06 11:52:24] HITS file was successfully produced:
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas 190244017 Jun  6 11:51 shared/HITS.pool.root.1
[2025-06-06 11:52:24]  *** Contents of shared directory: ***
[2025-06-06 11:52:24] total 405940
[2025-06-06 11:52:24] -rw-r--r--. 2 boincer umatlas 224063869 Jun  6 10:23 ATLAS.root_0
[2025-06-06 11:52:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 10:23 start_atlas.sh
[2025-06-06 11:52:24] -rw-r--r--. 2 boincer umatlas    508877 Jun  6 10:23 input.tar.gz
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas 190244017 Jun  6 11:51 HITS.pool.root.1
[2025-06-06 11:52:24] -rw-------. 1 boincer umatlas    839680 Jun  6 11:52 result.tar.gz
11:52:26 (771628): run_atlas exited; CPU time 39057.182406
11:52:26 (771628): called boinc_finish(0)

</stderr_txt>
]]>

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