Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:18 (3896670): wrapper (7.7.26015): starting
10:22:18 (3896670): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 10:22:18] Arguments: --nthreads 12
[2025-06-06 10:22:18] Threads: 12
[2025-06-06 10:22:18] Checking for CVMFS
[2025-06-06 10:22:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 10:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 10:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 10:22:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 10:22:19] 2.12.6.0 8433 34495 470336 146862 0 71 39349585 40960000 7341 16776704 1 103020718 99.684 86213397 24966 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 10:22:19] CVMFS is ok
[2025-06-06 10:22:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 10:22:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 10:22:19] Further information can be found at the LHC@home message board.
[2025-06-06 10:22:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 10:22:19] Checking for apptainer binary...
[2025-06-06 10:22:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 10:22:19] Running /usr/bin/apptainer --version
[2025-06-06 10:22:19] apptainer version 1.4.1-1.el9
[2025-06-06 10:22:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 10:22:20] c6-5-7-1.aglt2.org
[2025-06-06 10:22:20] apptainer works
[2025-06-06 10:22:20] Set ATHENA_PROC_NUMBER=12
[2025-06-06 10:22:20] Set ATHENA_CORE_NUMBER=12
[2025-06-06 10:22:20] Starting ATLAS job with PandaID=6677601788
[2025-06-06 10:22:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:10:43]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:10:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 11:10:43]  is_altstaged=None
[2025-06-06 11:10:43]  is_tar=False
[2025-06-06 11:10:43]  lfn=log.45006595._031391.job.log.tgz.1
[2025-06-06 11:10:43]  mtime=0
[2025-06-06 11:10:43]  protocol_id=None
[2025-06-06 11:10:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 11:10:43]  replicas=None
[2025-06-06 11:10:43]  scope=mc23_13p6TeV
[2025-06-06 11:10:43]  status=None
[2025-06-06 11:10:43]  status_code=0
[2025-06-06 11:10:43]  storage_token=
[2025-06-06 11:10:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677601788/log.45006595._031391.job.log.tgz.1
[2025-06-06 11:10:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/8a/log.45006595._031391.job.log.tgz.1
[2025-06-06 11:10:43]  workdir=None
[2025-06-06 11:10:43] ]
[2025-06-06 11:10:43] 2025-06-06 15:10:20,062 | INFO     | transferring file log.45006595._031391.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677601788/log.45006595._031391.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 11:10:43] 2025-06-06 15:10:20,062 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677601788/log.45006595._031391.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._031391.job
[2025-06-06 11:10:43] 2025-06-06 15:10:20,079 | INFO     | adding to output.list: log.45006595._031391.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/8a/log.45006595._031391.job.log.tg
[2025-06-06 11:10:43] 2025-06-06 15:10:20,080 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 11:10:43] 2025-06-06 15:10:20,080 | INFO     | summary of transferred files:
[2025-06-06 11:10:43] 2025-06-06 15:10:20,080 | INFO     |  -- lfn=log.45006595._031391.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 11:10:43] 2025-06-06 15:10:20,081 | INFO     | stage-out finished correctly
[2025-06-06 11:10:43] 2025-06-06 15:10:20,832 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 11:10:43] 2025-06-06 15:10:20,913 | INFO     | job 6677601788 has state=finished
[2025-06-06 11:10:43] 2025-06-06 15:10:20,913 | INFO     | preparing for final server update for job 6677601788 in state='finished'
[2025-06-06 11:10:43] 2025-06-06 15:10:20,913 | INFO     | this job has now completed (state=finished)
[2025-06-06 11:10:43] 2025-06-06 15:10:20,913 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 11:10:43] 2025-06-06 15:10:20,914 | INFO     | log transfer has been attempted: DONE
[2025-06-06 11:10:43] 2025-06-06 15:10:20,914 | INFO     | job 6677601788 has finished - writing final server update
[2025-06-06 11:10:43] 2025-06-06 15:10:20,914 | INFO     | total number of processed events: 400 (read)
[2025-06-06 11:10:43] 2025-06-06 15:10:20,930 | INFO     | executing command: lscpu
[2025-06-06 11:10:43] 2025-06-06 15:10:20,987 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 11:10:43] 2025-06-06 15:10:21,990 | INFO     | monitor loop #218: job 0:6677601788 is in state 'finished'
[2025-06-06 11:10:43] 2025-06-06 15:10:21,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:10:43] 2025-06-06 15:10:24,492 | INFO     | monitor loop #219: job 0:6677601788 is in state 'finished'
[2025-06-06 11:10:43] 2025-06-06 15:10:24,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:10:43] 2025-06-06 15:10:24,503 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 11:10:43] 2025-06-06 15:10:24,504 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677601788/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:10:43] 2025-06-06 15:10:24,504 | INFO     | extracted standard info from prmon json
[2025-06-06 11:10:43] 2025-06-06 15:10:24,505 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:10:43] 2025-06-06 15:10:24,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:10:43] 2025-06-06 15:10:24,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:10:43] 2025-06-06 15:10:24,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:10:43] 2025-06-06 15:10:24,507 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:10:43] 2025-06-06 15:10:24,507 | INFO     | sum of square deviations: 19832930.0
[2025-06-06 11:10:43] 2025-06-06 15:10:24,507 | INFO     | sum of deviations: -4150513779.5
[2025-06-06 11:10:43] 2025-06-06 15:10:24,507 | INFO     | mean x: 1749221267.5
[2025-06-06 11:10:43] 2025-06-06 15:10:24,507 | INFO     | mean y: 2536011.625
[2025-06-06 11:10:43] 2025-06-06 15:10:24,507 | INFO     | -- intersect: 366068819417.7181
[2025-06-06 11:10:43] 2025-06-06 15:10:24,507 | INFO     | intersect: 366068819417.7181
[2025-06-06 11:10:43] 2025-06-06 15:10:24,508 | INFO     | chi2: 0.08664456764020566
[2025-06-06 11:10:43] 2025-06-06 15:10:24,508 | INFO     | -- intersect: 366068819417.7181
[2025-06-06 11:10:43] 2025-06-06 15:10:24,508 | INFO     | current memory leak: -209.27 B/s (using 40 data points, chi2=0.09)
[2025-06-06 11:10:43] 2025-06-06 15:10:24,508 | INFO     | ..............................
[2025-06-06 11:10:43] 2025-06-06 15:10:24,508 | INFO     | . Timing measurements:
[2025-06-06 11:10:43] 2025-06-06 15:10:24,508 | INFO     | . get job = 0 s
[2025-06-06 11:10:43] 2025-06-06 15:10:24,508 | INFO     | . initial setup = 2 s
[2025-06-06 11:10:43] 2025-06-06 15:10:24,509 | INFO     | . payload setup = 5 s
[2025-06-06 11:10:43] 2025-06-06 15:10:24,509 | INFO     | . stage-in = 0 s
[2025-06-06 11:10:43] 2025-06-06 15:10:24,509 | INFO     | . payload execution = 2845 s
[2025-06-06 11:10:43] 2025-06-06 15:10:24,509 | INFO     | . stage-out = 0 s
[2025-06-06 11:10:43] 2025-06-06 15:10:24,509 | INFO     | . log creation = 0 s
[2025-06-06 11:10:43] 2025-06-06 15:10:24,509 | INFO     | ..............................
[2025-06-06 11:10:43] 2025-06-06 15:10:24,771 | INFO     | 
[2025-06-06 11:10:43] 2025-06-06 15:10:24,771 | INFO     | job summary report
[2025-06-06 11:10:43] 2025-06-06 15:10:24,771 | INFO     | --------------------------------------------------
[2025-06-06 11:10:43] 2025-06-06 15:10:24,771 | INFO     | PanDA job id: 6677601788
[2025-06-06 11:10:43] 2025-06-06 15:10:24,771 | INFO     | task id: 45006595
[2025-06-06 11:10:43] 2025-06-06 15:10:24,771 | INFO     | errors: (none)
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | pilot state: finished 
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | transexitcode: 0
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | exeerrorcode: 0
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | exeerrordiag: 
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | exitcode: 0
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | exitmsg: OK
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | cpuconsumptiontime: 30008 s
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | nevents: 400
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | neventsw: 0
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | pid: 3915453
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | pgrp: 3915453
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | corecount: 12
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | event service: False
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | sizes: {0: 2396514, 1: 2397370, 5: 2397576, 12: 2397632, 2854: 2422936, 2856: 2431877, 2857: 2432061, 2861: 2432231}
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | --------------------------------------------------
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | 
[2025-06-06 11:10:43] 2025-06-06 15:10:24,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 11:10:43] 2025-06-06 15:10:24,787 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,787 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:10:43] 2025-06-06 15:10:24,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,789 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:10:43] 2025-06-06 15:10:24,789 | INFO     | job 6677601788 has completed (purged errors)
[2025-06-06 11:10:43] 2025-06-06 15:10:24,789 | INFO     | overall cleanup function is called
[2025-06-06 11:10:43] 2025-06-06 15:10:25,796 | INFO     | --- collectZombieJob: --- 10, [3915453]
[2025-06-06 11:10:43] 2025-06-06 15:10:25,797 | INFO     | zombie collector waiting for pid 3915453
[2025-06-06 11:10:43] 2025-06-06 15:10:25,797 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:10:43] 2025-06-06 15:10:25,797 | INFO     | collected zombie processes
[2025-06-06 11:10:43] 2025-06-06 15:10:25,797 | INFO     | will attempt to kill all subprocesses of pid=3915453
[2025-06-06 11:10:43] 2025-06-06 15:10:26,009 | INFO     | process IDs to be killed: [3915453] (in reverse order)
[2025-06-06 11:10:43] 2025-06-06 15:10:26,078 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:10:43] 2025-06-06 15:10:26,079 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:10:43] 2025-06-06 15:10:26,087 | INFO     | did not find any defunct processes belonging to 3915453
[2025-06-06 11:10:43] 2025-06-06 15:10:26,094 | INFO     | did not find any defunct processes belonging to 3915453
[2025-06-06 11:10:43] 2025-06-06 15:10:26,094 | INFO     | ready for new job
[2025-06-06 11:10:43] 2025-06-06 15:10:26,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:10:43] 2025-06-06 15:10:26,096 | INFO     | **************************************
[2025-06-06 11:10:43] 2025-06-06 15:10:26,096 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:10:43] 2025-06-06 15:10:26,096 | INFO     | **************************************
[2025-06-06 11:10:43] 2025-06-06 15:10:26,096 | INFO     | 
[2025-06-06 11:10:43] 2025-06-06 15:10:26,110 | INFO     | architecture information:
[2025-06-06 11:10:43] 2025-06-06 15:10:26,111 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:10:43] 2025-06-06 15:10:26,126 | INFO     | cat /etc/os-release:
[2025-06-06 11:10:43] NAME="CentOS Linux"
[2025-06-06 11:10:43] VERSION="7 (Core)"
[2025-06-06 11:10:43] ID="centos"
[2025-06-06 11:10:43] ID_LIKE="rhel fedora"
[2025-06-06 11:10:43] VERSION_ID="7"
[2025-06-06 11:10:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:10:43] ANSI_COLOR="0;31"
[2025-06-06 11:10:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:10:43] HOME_URL="https://www.centos.org/"
[2025-06-06 11:10:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:10:43] 
[2025-06-06 11:10:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:10:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:10:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:10:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:10:43] 
[2025-06-06 11:10:43] 2025-06-06 15:10:26,126 | INFO     | **************************************
[2025-06-06 11:10:43] 2025-06-06 15:10:26,629 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 11:10:43] 2025-06-06 15:10:26,644 | INFO     | sufficient remaining disk space (75561435136 B)
[2025-06-06 11:10:43] 2025-06-06 15:10:26,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:10:43] 2025-06-06 15:10:26,645 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:10:43] 2025-06-06 15:10:26,645 | INFO     | update_server=False
[2025-06-06 11:10:43] 2025-06-06 15:10:26,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:10:43] 2025-06-06 15:10:26,645 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 11:10:43] 2025-06-06 15:10:26,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:10:43] 2025-06-06 15:10:26,646 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:10:43] 2025-06-06 15:10:26,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:10:43] 2025-06-06 15:10:26,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:10:43] 2025-06-06 15:10:26,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:10:43] 2025-06-06 15:10:26,996 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 11:10:43] 2025-06-06 15:10:26,996 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 11:10:43] 2025-06-06 15:10:26,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:10:43] 2025-06-06 15:10:26,996 | INFO     | will abort loop
[2025-06-06 11:10:43] 2025-06-06 15:10:27,139 | INFO     | all job control threads have been joined
[2025-06-06 11:10:43] 2025-06-06 15:10:27,380 | INFO     | all data control threads have been joined
[2025-06-06 11:10:43] 2025-06-06 15:10:27,479 | INFO     | all payload control threads have been joined
[2025-06-06 11:10:43] 2025-06-06 15:10:27,650 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:27,716 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,001 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,002 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,145 | INFO     | [job] control thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,385 | INFO     | [data] control thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,485 | INFO     | [payload] control thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,651 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,729 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,854 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:28,961 | INFO     | [job] validate thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:29,015 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:29,068 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:29,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:10:43] 2025-06-06 15:10:30,615 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:30,923 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:37,025 | INFO     | job.realtimelogging is not enabled
[2025-06-06 11:10:43] 2025-06-06 15:10:38,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:10:43] 2025-06-06 15:10:38,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797725222720)>', '<ExcThread(monitor, started 139797444134656)>']
[2025-06-06 11:10:43] 2025-06-06 15:10:38,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:10:43] 2025-06-06 15:10:38,700 | INFO     | [monitor] control thread has ended
[2025-06-06 11:10:43] 2025-06-06 15:10:43,614 | INFO     | all workflow threads have been joined
[2025-06-06 11:10:43] 2025-06-06 15:10:43,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:10:43] 2025-06-06 15:10:43,615 | INFO     | traces error code: 0
[2025-06-06 11:10:43] 2025-06-06 15:10:43,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:10:43] 2025-06-06 15:10:43,774 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:10:43] 2025-06-06 15:10:43,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:10:43] 2025-06-06 15:10:43,779 [wrapper] pilotpid: 3902387
[2025-06-06 11:10:43] 2025-06-06 15:10:43,782 [wrapper] Pilot exit status: 0
[2025-06-06 11:10:43] 2025-06-06 15:10:43,791 [wrapper] pandaids: 6677601788
[2025-06-06 11:10:43] 2025-06-06 15:10:43,844 [wrapper] cleanup supervisor_pilot  256265 3902388
[2025-06-06 11:10:43] 2025-06-06 15:10:43,847 [wrapper] Test setup, not cleaning
[2025-06-06 11:10:43] 2025-06-06 15:10:43,849 [wrapper] apfmon messages muted
[2025-06-06 11:10:43] 2025-06-06 15:10:43,852 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:10:43] 2025-06-06 15:10:43,854 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:10:43]  *** Error codes and diagnostics ***
[2025-06-06 11:10:43]     "exeErrorCode": 0,
[2025-06-06 11:10:43]     "exeErrorDiag": "",
[2025-06-06 11:10:43]     "pilotErrorCode": 0,
[2025-06-06 11:10:43]     "pilotErrorDiag": "",
[2025-06-06 11:10:43]  *** Listing of results directory ***
[2025-06-06 11:10:43] total 385048
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 07:50 pilot3.tar.gz
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 07:52 queuedata.json
[2025-06-06 11:10:43] -rwx------. 1 boincer umatlas     37140 Jun  3 07:53 runpilot2-wrapper.sh
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas       100 Jun  6 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:10:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 10:22 run_atlas
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas       105 Jun  6 10:22 job.xml
[2025-06-06 11:10:43] -rw-r--r--. 2 boincer umatlas 213691924 Jun  6 10:22 EVNT.45006593._001262.pool.root.1
[2025-06-06 11:10:43] -rw-r--r--. 2 boincer umatlas    508883 Jun  6 10:22 input.tar.gz
[2025-06-06 11:10:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 10:22 start_atlas.sh
[2025-06-06 11:10:43] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 10:22 shared
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas         0 Jun  6 10:22 boinc_lockfile
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas      2525 Jun  6 10:22 pandaJob.out
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas    985728 Jun  6 10:22 agis_schedconf.cvmfs.json
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas   1598969 Jun  6 10:22 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:10:43] drwx------. 4 boincer umatlas      4096 Jun  6 10:22 pilot3
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas      6839 Jun  6 11:03 init_data.xml
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas 175469235 Jun  6 11:09 HITS.45006595._031391.pool.root.1
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas       530 Jun  6 11:09 boinc_task_state.xml
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas        95 Jun  6 11:10 pilot_heartbeat.json
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas      1036 Jun  6 11:10 memory_monitor_summary.json
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas    342239 Jun  6 11:10 log.45006595._031391.job.log.tgz.1
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas      7720 Jun  6 11:10 heartbeat.json
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 11:10 boinc_mmap_file
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas        27 Jun  6 11:10 wrapper_checkpoint.txt
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas      4734 Jun  6 11:10 pilotlog.txt
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas    306893 Jun  6 11:10 log.45006595._031391.job.log.1
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas       357 Jun  6 11:10 output.list
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas       620 Jun  6 11:10 runtime_log
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas    665600 Jun  6 11:10 result.tar.gz
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas      8661 Jun  6 11:10 runtime_log.err
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas       653 Jun  6 11:10 9cBMDmOOfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmntjKDm4crjKn.diag
[2025-06-06 11:10:43] -rw-r--r--. 1 boincer umatlas     21341 Jun  6 11:10 stderr.txt
[2025-06-06 11:10:43] HITS file was successfully produced:
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas 175469235 Jun  6 11:09 shared/HITS.pool.root.1
[2025-06-06 11:10:43]  *** Contents of shared directory: ***
[2025-06-06 11:10:43] total 381220
[2025-06-06 11:10:43] -rw-r--r--. 2 boincer umatlas 213691924 Jun  6 10:22 ATLAS.root_0
[2025-06-06 11:10:43] -rw-r--r--. 2 boincer umatlas    508883 Jun  6 10:22 input.tar.gz
[2025-06-06 11:10:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 10:22 start_atlas.sh
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas 175469235 Jun  6 11:09 HITS.pool.root.1
[2025-06-06 11:10:43] -rw-------. 1 boincer umatlas    665600 Jun  6 11:10 result.tar.gz
11:10:45 (3896670): run_atlas exited; CPU time 30031.122445
11:10:45 (3896670): called boinc_finish(0)

</stderr_txt>
]]>

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