Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:51 (124008): wrapper (7.7.26015): starting
18:33:51 (124008): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 18:33:51] Arguments: --nthreads 4
[2025-06-06 18:33:51] Threads: 4
[2025-06-06 18:33:51] Checking for CVMFS
[2025-06-06 18:33:51] No cvmfs_config command found, will try listing directly
[2025-06-06 18:33:51] CVMFS is ok
[2025-06-06 18:33:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 18:33:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 18:33:51] Further information can be found at the LHC@home message board.
[2025-06-06 18:33:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 18:33:51] Checking for apptainer binary...
[2025-06-06 18:33:51] which: no apptainer in ((null))
[2025-06-06 18:33:51] apptainer is not installed, using version from CVMFS
[2025-06-06 18:33:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 18:33:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-06 18:33:52] apptainer works
[2025-06-06 18:33:52] Set ATHENA_PROC_NUMBER=4
[2025-06-06 18:33:52] Set ATHENA_CORE_NUMBER=4
[2025-06-06 18:33:52] Starting ATLAS job with PandaID=6669442976
[2025-06-06 18:33:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 20:26:08]  *** The last 200 lines of the pilot log: ***
[2025-06-06 20:26:08] 2025-06-06 18:25:44,791 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6669442976/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 20:26:08] 2025-06-06 18:25:45,052 | INFO     | number of running child processes to parent process 135957: 1
[2025-06-06 20:26:08] 2025-06-06 18:25:45,052 | INFO     | maximum number of monitored processes: 6
[2025-06-06 20:26:08] 2025-06-06 18:25:47,555 | INFO     | monitor loop #496: job 0:6669442976 is in state 'finished'
[2025-06-06 20:26:08] 2025-06-06 18:25:47,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,756 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 20:26:08] 2025-06-06 18:25:48,756 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6669442976/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,757 | INFO     | extracted standard info from prmon json
[2025-06-06 20:26:08] 2025-06-06 18:25:48,757 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 20:26:08] 2025-06-06 18:25:48,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 20:26:08] 2025-06-06 18:25:48,757 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 20:26:08] 2025-06-06 18:25:48,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | fitting pss+swap vs Time
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | sum of square deviations: 412686807.5
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | sum of deviations: -16001305463.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | mean x: 1749230989.5
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | mean y: 2465056.018181818
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | -- intersect: 67826245413.56026
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | intersect: 67826245413.56026
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | chi2: 1.403217801924088
[2025-06-06 20:26:08] 2025-06-06 18:25:48,759 | INFO     | sum of square deviations: 358927660.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | sum of deviations: -14327017296.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | mean x: 1749230837.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | mean y: 2469808.904761905
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | -- intersect: 69825064301.60994
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | intersect: 69825064301.60994
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | chi2: 1.40016008551066
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | current chi2=1.40016008551066 (change=0.21790747018996412 %)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | right removable region: 104
[2025-06-06 20:26:08] 2025-06-06 18:25:48,760 | INFO     | sum of square deviations: 358927660.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | sum of deviations: -26629483692.999985
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | mean x: 1749231142.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | mean y: 2494134.8952380954
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | -- intersect: 129781074507.26537
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | intersect: 129781074507.26537
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | chi2: 0.16602032522149246
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | current chi2=0.16602032522149246 (change=88.16859898770912 %)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | sum of square deviations: 310052325.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | sum of deviations: -23205320276.500004
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | mean x: 1749231294.5
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | mean y: 2483432.13
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | -- intersect: 130920619351.76614
[2025-06-06 20:26:08] 2025-06-06 18:25:48,761 | INFO     | intersect: 130920619351.76614
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | chi2: 0.16581670521103864
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | current chi2=0.16581670521103864 (change=0.12264763978878168 %)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | left removable region: 20
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | sum of square deviations: 183761585.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | sum of deviations: -16235050631.0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | mean x: 1749231416.5
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | mean y: 2471388.595238095
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | -- intersect: 154544350270.48096
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | intersect: 154544350270.48096
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | chi2: 0.14022887144787274
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | -- intersect: 154544350270.48096
[2025-06-06 20:26:08] 2025-06-06 18:25:48,762 | INFO     | current memory leak: -88.35 B/s (using 84 data points, chi2=0.14)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | ..............................
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | . Timing measurements:
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | . get job = 0 s
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | . initial setup = 1 s
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | . payload setup = 5 s
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | . stage-in = 0 s
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | . payload execution = 6677 s
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | . stage-out = 0 s
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | . log creation = 0 s
[2025-06-06 20:26:08] 2025-06-06 18:25:48,763 | INFO     | ..............................
[2025-06-06 20:26:08] 2025-06-06 18:25:48,818 | INFO     | 
[2025-06-06 20:26:08] 2025-06-06 18:25:48,818 | INFO     | job summary report
[2025-06-06 20:26:08] 2025-06-06 18:25:48,818 | INFO     | --------------------------------------------------
[2025-06-06 20:26:08] 2025-06-06 18:25:48,818 | INFO     | PanDA job id: 6669442976
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | task id: 44871837
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | errors: (none)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | pilot state: finished 
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | transexitcode: 0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | exeerrorcode: 0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | exeerrordiag: 
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | exitcode: 0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | exitmsg: OK
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | cpuconsumptiontime: 25911 s
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | nevents: 400
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | neventsw: 0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | pid: 135957
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | pgrp: 135957
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | corecount: 4
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | event service: False
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | sizes: {0: 2397231, 1: 2397430, 5: 2397636, 11: 2397692, 6687: 2433698, 6688: 2433698, 6694: 2433996}
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | --------------------------------------------------
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | 
[2025-06-06 20:26:08] 2025-06-06 18:25:48,819 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-06-06 20:26:08] 2025-06-06 18:25:48,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | job 6669442976 has completed (purged errors)
[2025-06-06 20:26:08] 2025-06-06 18:25:48,837 | INFO     | overall cleanup function is called
[2025-06-06 20:26:08] 2025-06-06 18:25:49,369 | INFO     | PID=127942 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-06 20:26:08] 2025-06-06 18:25:49,370 | INFO     | .. there are 2 such processes running
[2025-06-06 20:26:08] 2025-06-06 18:25:49,845 | INFO     | --- collectZombieJob: --- 10, [135957]
[2025-06-06 20:26:08] 2025-06-06 18:25:49,845 | INFO     | zombie collector waiting for pid 135957
[2025-06-06 20:26:08] 2025-06-06 18:25:49,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 20:26:08] 2025-06-06 18:25:49,845 | INFO     | collected zombie processes
[2025-06-06 20:26:08] 2025-06-06 18:25:49,845 | INFO     | will attempt to kill all subprocesses of pid=135957
[2025-06-06 20:26:08] 2025-06-06 18:25:50,106 | INFO     | process IDs to be killed: [135957] (in reverse order)
[2025-06-06 20:26:08] 2025-06-06 18:25:50,207 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 20:26:08] 2025-06-06 18:25:50,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 20:26:08] 2025-06-06 18:25:50,218 | INFO     | did not find any defunct processes belonging to 135957
[2025-06-06 20:26:08] 2025-06-06 18:25:50,226 | INFO     | did not find any defunct processes belonging to 135957
[2025-06-06 20:26:08] 2025-06-06 18:25:50,226 | INFO     | ready for new job
[2025-06-06 20:26:08] 2025-06-06 18:25:50,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 20:26:08] 2025-06-06 18:25:50,228 | INFO     | **************************************
[2025-06-06 20:26:08] 2025-06-06 18:25:50,228 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 20:26:08] 2025-06-06 18:25:50,228 | INFO     | **************************************
[2025-06-06 20:26:08] 2025-06-06 18:25:50,228 | INFO     | 
[2025-06-06 20:26:08] 2025-06-06 18:25:50,233 | INFO     | architecture information:
[2025-06-06 20:26:08] 2025-06-06 18:25:50,233 | INFO     | executing command: cat /etc/os-release
[2025-06-06 20:26:08] 2025-06-06 18:25:50,245 | INFO     | cat /etc/os-release:
[2025-06-06 20:26:08] NAME="CentOS Linux"
[2025-06-06 20:26:08] VERSION="7 (Core)"
[2025-06-06 20:26:08] ID="centos"
[2025-06-06 20:26:08] ID_LIKE="rhel fedora"
[2025-06-06 20:26:08] VERSION_ID="7"
[2025-06-06 20:26:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 20:26:08] ANSI_COLOR="0;31"
[2025-06-06 20:26:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 20:26:08] HOME_URL="https://www.centos.org/"
[2025-06-06 20:26:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 20:26:08] 
[2025-06-06 20:26:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 20:26:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 20:26:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 20:26:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 20:26:08] 
[2025-06-06 20:26:08] 2025-06-06 18:25:50,245 | INFO     | **************************************
[2025-06-06 20:26:08] 2025-06-06 18:25:50,748 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-06-06 20:26:08] 2025-06-06 18:25:50,761 | INFO     | sufficient remaining disk space (3383460102144 B)
[2025-06-06 20:26:08] 2025-06-06 18:25:50,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 20:26:08] 2025-06-06 18:25:50,762 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 20:26:08] 2025-06-06 18:25:50,762 | INFO     | update_server=False
[2025-06-06 20:26:08] 2025-06-06 18:25:50,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 20:26:08] 2025-06-06 18:25:50,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:26:08] 2025-06-06 18:25:50,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 20:26:08] 2025-06-06 18:25:50,764 | INFO     | all payload control threads have been joined
[2025-06-06 20:26:08] 2025-06-06 18:25:51,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:26:08] 2025-06-06 18:25:51,062 | INFO     | aborting loop
[2025-06-06 20:26:08] 2025-06-06 18:25:51,375 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 20:26:08] 2025-06-06 18:25:51,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 20:26:08] 2025-06-06 18:25:51,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 20:26:08] 2025-06-06 18:25:51,767 | INFO     | [job] retrieve thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:51,768 | INFO     | [job] queue monitor thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:51,769 | INFO     | [payload] control thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:51,801 | INFO     | all data control threads have been joined
[2025-06-06 20:26:08] 2025-06-06 18:25:52,067 | INFO     | [job] job monitor thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,102 | INFO     | [data] copytool_in thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,137 | INFO     | [payload] validate_post thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,303 | INFO     | [payload] failed_post thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,442 | INFO     | all job control threads have been joined
[2025-06-06 20:26:08] 2025-06-06 18:25:52,768 | INFO     | [data] copytool_out thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,807 | INFO     | [data] control thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,829 | INFO     | [job] validate thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,917 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,928 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:52,977 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:53,448 | INFO     | [job] control thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:25:53,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 20:26:08] 2025-06-06 18:25:57,697 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:26:01,386 | INFO     | job.realtimelogging is not enabled
[2025-06-06 20:26:08] 2025-06-06 18:26:02,391 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 20:26:08] 2025-06-06 18:26:03,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22504618596160)>', '<ExcThread(monitor, started 22504361883392)>']
[2025-06-06 20:26:08] 2025-06-06 18:26:04,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 20:26:08] 2025-06-06 18:26:04,443 | INFO     | [monitor] control thread has ended
[2025-06-06 20:26:08] 2025-06-06 18:26:08,623 | INFO     | all workflow threads have been joined
[2025-06-06 20:26:08] 2025-06-06 18:26:08,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 20:26:08] 2025-06-06 18:26:08,624 | INFO     | traces error code: 0
[2025-06-06 20:26:08] 2025-06-06 18:26:08,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 20:26:08] 2025-06-06 18:26:08,703 [wrapper] ==== pilot stdout END ====
[2025-06-06 20:26:08] 2025-06-06 18:26:08,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 20:26:08] 2025-06-06 18:26:08,709 [wrapper] pilotpid: 127942
[2025-06-06 20:26:08] 2025-06-06 18:26:08,712 [wrapper] Pilot exit status: 0
[2025-06-06 20:26:08] 2025-06-06 18:26:08,723 [wrapper] pandaids: 6669442976
[2025-06-06 20:26:08] 2025-06-06 18:26:08,794 [wrapper] cleanup supervisor_pilot  273827 127943
[2025-06-06 20:26:08] 2025-06-06 18:26:08,797 [wrapper] Test setup, not cleaning
[2025-06-06 20:26:08] 2025-06-06 18:26:08,799 [wrapper] apfmon messages muted
[2025-06-06 20:26:08] 2025-06-06 18:26:08,801 [wrapper] ==== wrapper stdout END ====
[2025-06-06 20:26:08] 2025-06-06 18:26:08,804 [wrapper] ==== wrapper stderr END ====
[2025-06-06 20:26:08]  *** Error codes and diagnostics ***
[2025-06-06 20:26:08]     "exeErrorCode": 0,
[2025-06-06 20:26:08]     "exeErrorDiag": "",
[2025-06-06 20:26:08]     "pilotErrorCode": 0,
[2025-06-06 20:26:08]     "pilotErrorDiag": "",
[2025-06-06 20:26:08]  *** Listing of results directory ***
[2025-06-06 20:26:08] total 419460
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc      5111 May 29 08:19 queuedata.json
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc    495897 May 29 08:19 pilot3.tar.gz
[2025-06-06 20:26:08] -rwx------ 1 boinc boinc     37140 May 29 08:20 runpilot2-wrapper.sh
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc       100 Jun  6 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 20:26:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 18:33 run_atlas
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc       105 Jun  6 18:33 job.xml
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc      6683 Jun  6 18:33 init_data.xml
[2025-06-06 20:26:08] -rw-r--r-- 2 boinc boinc 227193556 Jun  6 18:33 EVNT.44871834._003793.pool.root.1
[2025-06-06 20:26:08] -rw-r--r-- 2 boinc boinc     15093 Jun  6 18:33 start_atlas.sh
[2025-06-06 20:26:08] drwxrwx--x 2 boinc boinc      4096 Jun  6 18:33 shared
[2025-06-06 20:26:08] -rw-r--r-- 2 boinc boinc    508876 Jun  6 18:33 input.tar.gz
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc         0 Jun  6 18:33 boinc_lockfile
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc      2558 Jun  6 18:33 pandaJob.out
[2025-06-06 20:26:08] -rw------- 1 boinc boinc    985748 Jun  6 18:33 agis_schedconf.cvmfs.json
[2025-06-06 20:26:08] -rw------- 1 boinc boinc   1598969 Jun  6 18:33 agis_ddmendpoints.agis.ALL.json
[2025-06-06 20:26:08] drwx------ 4 boinc boinc      4096 Jun  6 18:34 pilot3
[2025-06-06 20:26:08] -rw------- 1 boinc boinc        95 Jun  6 20:25 pilot_heartbeat.json
[2025-06-06 20:26:08] -rw------- 1 boinc boinc 196672764 Jun  6 20:25 HITS.44871837._096246.pool.root.1
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc       529 Jun  6 20:25 boinc_task_state.xml
[2025-06-06 20:26:08] -rw------- 1 boinc boinc      1038 Jun  6 20:25 memory_monitor_summary.json
[2025-06-06 20:26:08] -rw------- 1 boinc boinc    263752 Jun  6 20:25 log.44871837._096246.job.log.tgz.1
[2025-06-06 20:26:08] -rw------- 1 boinc boinc      7702 Jun  6 20:25 heartbeat.json
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc      8192 Jun  6 20:26 boinc_mmap_file
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc        27 Jun  6 20:26 wrapper_checkpoint.txt
[2025-06-06 20:26:08] -rw------- 1 boinc boinc      4436 Jun  6 20:26 pilotlog.txt
[2025-06-06 20:26:08] -rw------- 1 boinc boinc    648145 Jun  6 20:26 log.44871837._096246.job.log.1
[2025-06-06 20:26:08] -rw------- 1 boinc boinc       357 Jun  6 20:26 output.list
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc       620 Jun  6 20:26 runtime_log
[2025-06-06 20:26:08] -rw------- 1 boinc boinc    931840 Jun  6 20:26 result.tar.gz
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc      9025 Jun  6 20:26 runtime_log.err
[2025-06-06 20:26:08] -rw------- 1 boinc boinc       661 Jun  6 20:26 0sFODmnnle7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHzdKDmdUF0Dn.diag
[2025-06-06 20:26:08] -rw-r--r-- 1 boinc boinc     20882 Jun  6 20:26 stderr.txt
[2025-06-06 20:26:08] HITS file was successfully produced:
[2025-06-06 20:26:08] -rw------- 1 boinc boinc 196672764 Jun  6 20:25 shared/HITS.pool.root.1
[2025-06-06 20:26:08]  *** Contents of shared directory: ***
[2025-06-06 20:26:08] total 415372
[2025-06-06 20:26:08] -rw-r--r-- 2 boinc boinc 227193556 Jun  6 18:33 ATLAS.root_0
[2025-06-06 20:26:08] -rw-r--r-- 2 boinc boinc     15093 Jun  6 18:33 start_atlas.sh
[2025-06-06 20:26:08] -rw-r--r-- 2 boinc boinc    508876 Jun  6 18:33 input.tar.gz
[2025-06-06 20:26:08] -rw------- 1 boinc boinc 196672764 Jun  6 20:25 HITS.pool.root.1
[2025-06-06 20:26:08] -rw------- 1 boinc boinc    931840 Jun  6 20:26 result.tar.gz
20:26:10 (124008): run_atlas exited; CPU time 26070.592292
20:26:10 (124008): called boinc_finish(0)

</stderr_txt>
]]>

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