Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:34:09 (2227275): wrapper (7.7.26015): starting
09:34:09 (2227275): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 09:34:09] Arguments: --nthreads 8
[2025-06-06 09:34:09] Threads: 8
[2025-06-06 09:34:09] Checking for CVMFS
[2025-06-06 09:34:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 09:34:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 09:34:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 09:34:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 09:34:10] 2.12.6.0 216356 2210 285964 146860 1 585 31704576 40960001 27094 16776704 0 34128659 99.693 25776696 38121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 09:34:10] CVMFS is ok
[2025-06-06 09:34:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 09:34:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 09:34:10] Further information can be found at the LHC@home message board.
[2025-06-06 09:34:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 09:34:10] Checking for apptainer binary...
[2025-06-06 09:34:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 09:34:10] Running /usr/bin/apptainer --version
[2025-06-06 09:34:10] apptainer version 1.4.1-1.el9
[2025-06-06 09:34:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 09:34:10] c8-16-1.aglt2.org
[2025-06-06 09:34:10] apptainer works
[2025-06-06 09:34:10] Set ATHENA_PROC_NUMBER=8
[2025-06-06 09:34:10] Set ATHENA_CORE_NUMBER=8
[2025-06-06 09:34:10] Starting ATLAS job with PandaID=6669443859
[2025-06-06 09:34:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 10:32:03]  *** The last 200 lines of the pilot log: ***
[2025-06-06 10:32:03]  is_altstaged=None
[2025-06-06 10:32:03]  is_tar=False
[2025-06-06 10:32:03]  lfn=log.44871837._096621.job.log.tgz.1
[2025-06-06 10:32:03]  mtime=0
[2025-06-06 10:32:03]  protocol_id=None
[2025-06-06 10:32:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 10:32:03]  replicas=None
[2025-06-06 10:32:03]  scope=mc23_13p6TeV
[2025-06-06 10:32:03]  status=None
[2025-06-06 10:32:03]  status_code=0
[2025-06-06 10:32:03]  storage_token=
[2025-06-06 10:32:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669443859/log.44871837._096621.job.log.tgz.1
[2025-06-06 10:32:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/1e/log.44871837._096621.job.log.tgz.1
[2025-06-06 10:32:03]  workdir=None
[2025-06-06 10:32:03] ]
[2025-06-06 10:32:03] 2025-06-06 14:31:35,824 | INFO     | transferring file log.44871837._096621.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669443859/log.44871837._096621.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 10:32:03] 2025-06-06 14:31:35,824 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669443859/log.44871837._096621.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._096621.job
[2025-06-06 10:32:03] 2025-06-06 14:31:35,841 | INFO     | adding to output.list: log.44871837._096621.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/1e/log.44871837._096621.job.log.tg
[2025-06-06 10:32:03] 2025-06-06 14:31:35,842 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 10:32:03] 2025-06-06 14:31:35,842 | INFO     | summary of transferred files:
[2025-06-06 10:32:03] 2025-06-06 14:31:35,842 | INFO     |  -- lfn=log.44871837._096621.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 10:32:03] 2025-06-06 14:31:35,842 | INFO     | stage-out finished correctly
[2025-06-06 10:32:03] 2025-06-06 14:31:37,456 | INFO     | monitor loop #255: job 0:6669443859 is in state 'finished'
[2025-06-06 10:32:03] 2025-06-06 14:31:37,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:32:03] 2025-06-06 14:31:37,778 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 10:32:03] 2025-06-06 14:31:38,788 | INFO     | job 6669443859 has state=finished
[2025-06-06 10:32:03] 2025-06-06 14:31:38,789 | INFO     | preparing for final server update for job 6669443859 in state='finished'
[2025-06-06 10:32:03] 2025-06-06 14:31:38,790 | INFO     | this job has now completed (state=finished)
[2025-06-06 10:32:03] 2025-06-06 14:31:38,790 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 10:32:03] 2025-06-06 14:31:38,790 | INFO     | log transfer has been attempted: DONE
[2025-06-06 10:32:03] 2025-06-06 14:31:38,790 | INFO     | job 6669443859 has finished - writing final server update
[2025-06-06 10:32:03] 2025-06-06 14:31:38,790 | INFO     | total number of processed events: 400 (read)
[2025-06-06 10:32:03] 2025-06-06 14:31:38,808 | INFO     | executing command: lscpu
[2025-06-06 10:32:03] 2025-06-06 14:31:38,895 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 10:32:03] 2025-06-06 14:31:39,959 | INFO     | monitor loop #256: job 0:6669443859 is in state 'finished'
[2025-06-06 10:32:03] 2025-06-06 14:31:39,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:32:03] 2025-06-06 14:31:42,462 | INFO     | monitor loop #257: job 0:6669443859 is in state 'finished'
[2025-06-06 10:32:03] 2025-06-06 14:31:42,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:32:03] 2025-06-06 14:31:42,593 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 10:32:03] 2025-06-06 14:31:42,593 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669443859/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 10:32:03] 2025-06-06 14:31:42,594 | INFO     | extracted standard info from prmon json
[2025-06-06 10:32:03] 2025-06-06 14:31:42,594 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 10:32:03] 2025-06-06 14:31:42,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 10:32:03] 2025-06-06 14:31:42,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 10:32:03] 2025-06-06 14:31:42,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 10:32:03] 2025-06-06 14:31:42,595 | INFO     | fitting pss+swap vs Time
[2025-06-06 10:32:03] 2025-06-06 14:31:42,595 | INFO     | sum of square deviations: 36465800.0
[2025-06-06 10:32:03] 2025-06-06 14:31:42,595 | INFO     | sum of deviations: -6375947286.0
[2025-06-06 10:32:03] 2025-06-06 14:31:42,595 | INFO     | mean x: 1749218654.0
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | mean y: 2373762.1836734693
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | -- intersect: 305848561960.2178
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | intersect: 305848561960.2178
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | chi2: 0.11670481198473316
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | -- intersect: 305848561960.2178
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | current memory leak: -174.85 B/s (using 49 data points, chi2=0.12)
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | ..............................
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | . Timing measurements:
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | . get job = 0 s
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | . initial setup = 2 s
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | . payload setup = 6 s
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | . stage-in = 0 s
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | . payload execution = 3411 s
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | . stage-out = 0 s
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | . log creation = 0 s
[2025-06-06 10:32:03] 2025-06-06 14:31:42,596 | INFO     | ..............................
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | 
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | job summary report
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | --------------------------------------------------
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | PanDA job id: 6669443859
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | task id: 44871837
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | errors: (none)
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | pilot state: finished 
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | transexitcode: 0
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | exeerrorcode: 0
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | exeerrordiag: 
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | exitcode: 0
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | exitmsg: OK
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | cpuconsumptiontime: 25382 s
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | nevents: 400
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | neventsw: 0
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | pid: 2249270
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | pgrp: 2249270
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | corecount: 8
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | event service: False
[2025-06-06 10:32:03] 2025-06-06 14:31:42,639 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 3420: 2423235, 3421: 2432176, 3423: 2432232, 3428: 2432530}
[2025-06-06 10:32:03] 2025-06-06 14:31:42,640 | INFO     | --------------------------------------------------
[2025-06-06 10:32:03] 2025-06-06 14:31:42,640 | INFO     | 
[2025-06-06 10:32:03] 2025-06-06 14:31:42,640 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | job 6669443859 has completed (purged errors)
[2025-06-06 10:32:03] 2025-06-06 14:31:42,653 | INFO     | overall cleanup function is called
[2025-06-06 10:32:03] 2025-06-06 14:31:43,658 | INFO     | --- collectZombieJob: --- 10, [2249270]
[2025-06-06 10:32:03] 2025-06-06 14:31:43,658 | INFO     | zombie collector waiting for pid 2249270
[2025-06-06 10:32:03] 2025-06-06 14:31:43,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 10:32:03] 2025-06-06 14:31:43,658 | INFO     | collected zombie processes
[2025-06-06 10:32:03] 2025-06-06 14:31:43,658 | INFO     | will attempt to kill all subprocesses of pid=2249270
[2025-06-06 10:32:03] 2025-06-06 14:31:44,026 | INFO     | process IDs to be killed: [2249270] (in reverse order)
[2025-06-06 10:32:03] 2025-06-06 14:31:44,175 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 10:32:03] 2025-06-06 14:31:44,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 10:32:03] 2025-06-06 14:31:44,199 | INFO     | did not find any defunct processes belonging to 2249270
[2025-06-06 10:32:03] 2025-06-06 14:31:44,221 | INFO     | did not find any defunct processes belonging to 2249270
[2025-06-06 10:32:03] 2025-06-06 14:31:44,222 | INFO     | ready for new job
[2025-06-06 10:32:03] 2025-06-06 14:31:44,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 10:32:03] 2025-06-06 14:31:44,223 | INFO     | **************************************
[2025-06-06 10:32:03] 2025-06-06 14:31:44,223 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 10:32:03] 2025-06-06 14:31:44,223 | INFO     | **************************************
[2025-06-06 10:32:03] 2025-06-06 14:31:44,223 | INFO     | 
[2025-06-06 10:32:03] 2025-06-06 14:31:44,240 | INFO     | architecture information:
[2025-06-06 10:32:03] 2025-06-06 14:31:44,240 | INFO     | executing command: cat /etc/os-release
[2025-06-06 10:32:03] 2025-06-06 14:31:44,254 | INFO     | cat /etc/os-release:
[2025-06-06 10:32:03] NAME="CentOS Linux"
[2025-06-06 10:32:03] VERSION="7 (Core)"
[2025-06-06 10:32:03] ID="centos"
[2025-06-06 10:32:03] ID_LIKE="rhel fedora"
[2025-06-06 10:32:03] VERSION_ID="7"
[2025-06-06 10:32:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 10:32:03] ANSI_COLOR="0;31"
[2025-06-06 10:32:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 10:32:03] HOME_URL="https://www.centos.org/"
[2025-06-06 10:32:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 10:32:03] 
[2025-06-06 10:32:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 10:32:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 10:32:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 10:32:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 10:32:03] 
[2025-06-06 10:32:03] 2025-06-06 14:31:44,255 | INFO     | **************************************
[2025-06-06 10:32:03] 2025-06-06 14:31:44,757 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 10:32:03] 2025-06-06 14:31:44,772 | INFO     | sufficient remaining disk space (173721780224 B)
[2025-06-06 10:32:03] 2025-06-06 14:31:44,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 10:32:03] 2025-06-06 14:31:44,773 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 10:32:03] 2025-06-06 14:31:44,773 | INFO     | update_server=False
[2025-06-06 10:32:03] 2025-06-06 14:31:44,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 10:32:03] 2025-06-06 14:31:44,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 10:32:03] 2025-06-06 14:31:44,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 10:32:03] 2025-06-06 14:31:44,965 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 10:32:03] 2025-06-06 14:31:44,965 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 10:32:03] 2025-06-06 14:31:44,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:32:03] 2025-06-06 14:31:44,965 | INFO     | will abort loop
[2025-06-06 10:32:03] 2025-06-06 14:31:44,977 | INFO     | all data control threads have been joined
[2025-06-06 10:32:03] 2025-06-06 14:31:45,346 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 10:32:03] 2025-06-06 14:31:45,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 10:32:03] 2025-06-06 14:31:45,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 10:32:03] 2025-06-06 14:31:45,749 | INFO     | all job control threads have been joined
[2025-06-06 10:32:03] 2025-06-06 14:31:45,774 | INFO     | [job] retrieve thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:45,842 | INFO     | [job] validate thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:45,951 | INFO     | [payload] validate_post thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:45,970 | INFO     | [job] job monitor thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:45,982 | INFO     | [data] control thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:46,006 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:46,131 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:46,251 | INFO     | all payload control threads have been joined
[2025-06-06 10:32:03] 2025-06-06 14:31:46,754 | INFO     | [job] control thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:46,779 | INFO     | [data] copytool_out thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:46,796 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:46,839 | INFO     | [payload] failed_post thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:46,883 | INFO     | [data] copytool_in thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:47,256 | INFO     | [payload] control thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:47,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:32:03] 2025-06-06 14:31:48,654 | INFO     | [job] queue monitor thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:48,778 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:55,513 | INFO     | job.realtimelogging is not enabled
[2025-06-06 10:32:03] 2025-06-06 14:31:56,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 10:32:03] 2025-06-06 14:31:57,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004948768576)>', '<ExcThread(monitor, started 140004315621120)>']
[2025-06-06 10:32:03] 2025-06-06 14:31:58,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 10:32:03] 2025-06-06 14:31:58,411 | INFO     | [monitor] control thread has ended
[2025-06-06 10:32:03] 2025-06-06 14:32:02,846 | INFO     | all workflow threads have been joined
[2025-06-06 10:32:03] 2025-06-06 14:32:02,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 10:32:03] 2025-06-06 14:32:02,846 | INFO     | traces error code: 0
[2025-06-06 10:32:03] 2025-06-06 14:32:02,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 10:32:03] 2025-06-06 14:32:02,958 [wrapper] ==== pilot stdout END ====
[2025-06-06 10:32:03] 2025-06-06 14:32:02,960 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 10:32:03] 2025-06-06 14:32:02,962 [wrapper] pilotpid: 2231401
[2025-06-06 10:32:03] 2025-06-06 14:32:02,964 [wrapper] Pilot exit status: 0
[2025-06-06 10:32:03] 2025-06-06 14:32:02,974 [wrapper] pandaids: 6669443859
[2025-06-06 10:32:03] 2025-06-06 14:32:03,081 [wrapper] cleanup supervisor_pilot 3933755 2231402
[2025-06-06 10:32:03] 2025-06-06 14:32:03,084 [wrapper] Test setup, not cleaning
[2025-06-06 10:32:03] 2025-06-06 14:32:03,086 [wrapper] apfmon messages muted
[2025-06-06 10:32:03] 2025-06-06 14:32:03,087 [wrapper] ==== wrapper stdout END ====
[2025-06-06 10:32:03] 2025-06-06 14:32:03,089 [wrapper] ==== wrapper stderr END ====
[2025-06-06 10:32:03]  *** Error codes and diagnostics ***
[2025-06-06 10:32:03]     "exeErrorCode": 0,
[2025-06-06 10:32:03]     "exeErrorDiag": "",
[2025-06-06 10:32:03]     "pilotErrorCode": 0,
[2025-06-06 10:32:03]     "pilotErrorDiag": "",
[2025-06-06 10:32:03]  *** Listing of results directory ***
[2025-06-06 10:32:03] total 415836
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas    503527 Apr  3 03:42 pilot3.tar.gz
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas      5111 May 29 03:07 queuedata.json
[2025-06-06 10:32:03] -rwx------. 1 boincer umatlas     37140 May 29 03:08 runpilot2-wrapper.sh
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas       100 Jun  6 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 10:32:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 09:34 run_atlas
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas       105 Jun  6 09:34 job.xml
[2025-06-06 10:32:03] -rw-r--r--. 2 boincer umatlas 227352067 Jun  6 09:34 EVNT.44871834._003808.pool.root.1
[2025-06-06 10:32:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 09:34 start_atlas.sh
[2025-06-06 10:32:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 09:34 shared
[2025-06-06 10:32:03] -rw-r--r--. 2 boincer umatlas    517090 Jun  6 09:34 input.tar.gz
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas         0 Jun  6 09:34 boinc_lockfile
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 09:34 pandaJob.out
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas    985728 Jun  6 09:34 agis_schedconf.cvmfs.json
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas   1598969 Jun  6 09:34 agis_ddmendpoints.agis.ALL.json
[2025-06-06 10:32:03] drwx------. 4 boincer umatlas      4096 Jun  6 09:34 pilot3
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas      7158 Jun  6 10:29 init_data.xml
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas 193329014 Jun  6 10:31 HITS.44871837._096621.pool.root.1
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas       529 Jun  6 10:31 boinc_task_state.xml
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas      1036 Jun  6 10:31 memory_monitor_summary.json
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas        95 Jun  6 10:31 pilot_heartbeat.json
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas    291827 Jun  6 10:31 log.44871837._096621.job.log.tgz.1
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas      7694 Jun  6 10:31 heartbeat.json
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas        27 Jun  6 10:32 wrapper_checkpoint.txt
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 10:32 boinc_mmap_file
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas      4612 Jun  6 10:32 pilotlog.txt
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas    352356 Jun  6 10:32 log.44871837._096621.job.log.1
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas       357 Jun  6 10:32 output.list
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas       620 Jun  6 10:32 runtime_log
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas    665600 Jun  6 10:32 result.tar.gz
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas      8654 Jun  6 10:32 runtime_log.err
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas       651 Jun  6 10:32 kAJLDmgYme7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml2dKDmvghKOo.diag
[2025-06-06 10:32:03] -rw-r--r--. 1 boincer umatlas     21368 Jun  6 10:32 stderr.txt
[2025-06-06 10:32:03] HITS file was successfully produced:
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas 193329014 Jun  6 10:31 shared/HITS.pool.root.1
[2025-06-06 10:32:03]  *** Contents of shared directory: ***
[2025-06-06 10:32:03] total 412004
[2025-06-06 10:32:03] -rw-r--r--. 2 boincer umatlas 227352067 Jun  6 09:34 ATLAS.root_0
[2025-06-06 10:32:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 09:34 start_atlas.sh
[2025-06-06 10:32:03] -rw-r--r--. 2 boincer umatlas    517090 Jun  6 09:34 input.tar.gz
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas 193329014 Jun  6 10:31 HITS.pool.root.1
[2025-06-06 10:32:03] -rw-------. 1 boincer umatlas    665600 Jun  6 10:32 result.tar.gz
10:32:04 (2227275): run_atlas exited; CPU time 25475.522783
10:32:04 (2227275): called boinc_finish(0)

</stderr_txt>
]]>

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