Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:58 (2415145): wrapper (7.7.26015): starting
09:31:58 (2415145): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 09:31:58] Arguments: --nthreads 8
[2025-06-06 09:31:58] Threads: 8
[2025-06-06 09:31:58] Checking for CVMFS
[2025-06-06 09:31:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 09:31:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 09:31:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 09:31:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 09:31:58] 2.12.6.0 861369 35743 570472 146860 2 816 38371913 40960001 11973 16776704 0 167816095 99.659 155006573 26469 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 09:31:58] CVMFS is ok
[2025-06-06 09:31:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 09:31:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 09:31:58] Further information can be found at the LHC@home message board.
[2025-06-06 09:31:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 09:31:58] Checking for apptainer binary...
[2025-06-06 09:31:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 09:31:58] Running /usr/bin/apptainer --version
[2025-06-06 09:31:58] apptainer version 1.4.1-1.el9
[2025-06-06 09:31:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 09:31:58] c7-13-33.aglt2.org
[2025-06-06 09:31:58] apptainer works
[2025-06-06 09:31:58] Set ATHENA_PROC_NUMBER=8
[2025-06-06 09:31:58] Set ATHENA_CORE_NUMBER=8
[2025-06-06 09:31:58] Starting ATLAS job with PandaID=6669443622
[2025-06-06 09:31:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 10:52:22]  *** The last 200 lines of the pilot log: ***
[2025-06-06 10:52:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 10:52:22]  is_altstaged=None
[2025-06-06 10:52:22]  is_tar=False
[2025-06-06 10:52:22]  lfn=log.44871837._096500.job.log.tgz.1
[2025-06-06 10:52:22]  mtime=0
[2025-06-06 10:52:22]  protocol_id=None
[2025-06-06 10:52:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 10:52:22]  replicas=None
[2025-06-06 10:52:22]  scope=mc23_13p6TeV
[2025-06-06 10:52:22]  status=None
[2025-06-06 10:52:22]  status_code=0
[2025-06-06 10:52:22]  storage_token=
[2025-06-06 10:52:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669443622/log.44871837._096500.job.log.tgz.1
[2025-06-06 10:52:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/4d/log.44871837._096500.job.log.tgz.1
[2025-06-06 10:52:22]  workdir=None
[2025-06-06 10:52:22] ]
[2025-06-06 10:52:22] 2025-06-06 14:51:59,656 | INFO     | transferring file log.44871837._096500.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669443622/log.44871837._096500.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 10:52:22] 2025-06-06 14:51:59,657 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669443622/log.44871837._096500.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._096500.job
[2025-06-06 10:52:22] 2025-06-06 14:51:59,671 | INFO     | adding to output.list: log.44871837._096500.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/4d/log.44871837._096500.job.log.tg
[2025-06-06 10:52:22] 2025-06-06 14:51:59,671 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 10:52:22] 2025-06-06 14:51:59,672 | INFO     | summary of transferred files:
[2025-06-06 10:52:22] 2025-06-06 14:51:59,672 | INFO     |  -- lfn=log.44871837._096500.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 10:52:22] 2025-06-06 14:51:59,672 | INFO     | stage-out finished correctly
[2025-06-06 10:52:22] 2025-06-06 14:51:59,731 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 10:52:22] 2025-06-06 14:51:59,791 | INFO     | job 6669443622 has state=finished
[2025-06-06 10:52:22] 2025-06-06 14:51:59,791 | INFO     | preparing for final server update for job 6669443622 in state='finished'
[2025-06-06 10:52:22] 2025-06-06 14:51:59,792 | INFO     | this job has now completed (state=finished)
[2025-06-06 10:52:22] 2025-06-06 14:51:59,792 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 10:52:22] 2025-06-06 14:51:59,792 | INFO     | log transfer has been attempted: DONE
[2025-06-06 10:52:22] 2025-06-06 14:51:59,792 | INFO     | job 6669443622 has finished - writing final server update
[2025-06-06 10:52:22] 2025-06-06 14:51:59,792 | INFO     | total number of processed events: 400 (read)
[2025-06-06 10:52:22] 2025-06-06 14:51:59,809 | INFO     | executing command: lscpu
[2025-06-06 10:52:22] 2025-06-06 14:51:59,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 10:52:22] 2025-06-06 14:51:59,944 | WARNING  | process 2437127 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 10:52:22] 2025-06-06 14:51:59,945 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669443622/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 10:52:22] 2025-06-06 14:52:00,188 | INFO     | number of running child processes to parent process 2437127: 1
[2025-06-06 10:52:22] 2025-06-06 14:52:00,189 | INFO     | maximum number of monitored processes: 6
[2025-06-06 10:52:22] 2025-06-06 14:52:02,693 | INFO     | monitor loop #356: job 0:6669443622 is in state 'finished'
[2025-06-06 10:52:22] 2025-06-06 14:52:02,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:52:22] 2025-06-06 14:52:03,191 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 10:52:22] 2025-06-06 14:52:03,192 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669443622/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 10:52:22] 2025-06-06 14:52:03,192 | INFO     | extracted standard info from prmon json
[2025-06-06 10:52:22] 2025-06-06 14:52:03,192 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 10:52:22] 2025-06-06 14:52:03,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 10:52:22] 2025-06-06 14:52:03,193 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 10:52:22] 2025-06-06 14:52:03,193 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 10:52:22] 2025-06-06 14:52:03,195 | INFO     | fitting pss+swap vs Time
[2025-06-06 10:52:22] 2025-06-06 14:52:03,195 | INFO     | sum of square deviations: 115715658.0
[2025-06-06 10:52:22] 2025-06-06 14:52:03,195 | INFO     | sum of deviations: -12154174939.5
[2025-06-06 10:52:22] 2025-06-06 14:52:03,196 | INFO     | mean x: 1749219224.5
[2025-06-06 10:52:22] 2025-06-06 14:52:03,196 | INFO     | mean y: 2334287.013888889
[2025-06-06 10:52:22] 2025-06-06 14:52:03,196 | INFO     | -- intersect: 183731285317.2152
[2025-06-06 10:52:22] 2025-06-06 14:52:03,196 | INFO     | intersect: 183731285317.2152
[2025-06-06 10:52:22] 2025-06-06 14:52:03,196 | INFO     | chi2: 0.1847357171826825
[2025-06-06 10:52:22] 2025-06-06 14:52:03,196 | INFO     | -- intersect: 183731285317.2152
[2025-06-06 10:52:22] 2025-06-06 14:52:03,196 | INFO     | current memory leak: -105.03 B/s (using 72 data points, chi2=0.18)
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | ..............................
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | . Timing measurements:
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | . get job = 0 s
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | . initial setup = 2 s
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | . payload setup = 6 s
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | . stage-in = 0 s
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | . payload execution = 4765 s
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | . stage-out = 0 s
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | . log creation = 0 s
[2025-06-06 10:52:22] 2025-06-06 14:52:03,197 | INFO     | ..............................
[2025-06-06 10:52:22] 2025-06-06 14:52:03,440 | INFO     | 
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | job summary report
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | --------------------------------------------------
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | PanDA job id: 6669443622
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | task id: 44871837
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | errors: (none)
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | pilot state: finished 
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | transexitcode: 0
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | exeerrorcode: 0
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | exeerrordiag: 
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | exitcode: 0
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | exitmsg: OK
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | cpuconsumptiontime: 35708 s
[2025-06-06 10:52:22] 2025-06-06 14:52:03,441 | INFO     | nevents: 400
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | neventsw: 0
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | pid: 2437127
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | pgrp: 2437127
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | corecount: 8
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | event service: False
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | sizes: {0: 2397341, 4: 2397547, 11: 2397575, 4775: 2423785, 4776: 2432782, 4779: 2432896}
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | --------------------------------------------------
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | 
[2025-06-06 10:52:22] 2025-06-06 14:52:03,442 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 10:52:22] 2025-06-06 14:52:03,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 10:52:22] 2025-06-06 14:52:03,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 10:52:22] 2025-06-06 14:52:03,467 | INFO     | job 6669443622 has completed (purged errors)
[2025-06-06 10:52:22] 2025-06-06 14:52:03,467 | INFO     | overall cleanup function is called
[2025-06-06 10:52:22] 2025-06-06 14:52:04,474 | INFO     | --- collectZombieJob: --- 10, [2437127]
[2025-06-06 10:52:22] 2025-06-06 14:52:04,474 | INFO     | zombie collector waiting for pid 2437127
[2025-06-06 10:52:22] 2025-06-06 14:52:04,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 10:52:22] 2025-06-06 14:52:04,475 | INFO     | collected zombie processes
[2025-06-06 10:52:22] 2025-06-06 14:52:04,475 | INFO     | will attempt to kill all subprocesses of pid=2437127
[2025-06-06 10:52:22] 2025-06-06 14:52:04,707 | INFO     | process IDs to be killed: [2437127] (in reverse order)
[2025-06-06 10:52:22] 2025-06-06 14:52:04,790 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 10:52:22] 2025-06-06 14:52:04,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 10:52:22] 2025-06-06 14:52:04,804 | INFO     | did not find any defunct processes belonging to 2437127
[2025-06-06 10:52:22] 2025-06-06 14:52:04,818 | INFO     | did not find any defunct processes belonging to 2437127
[2025-06-06 10:52:22] 2025-06-06 14:52:04,818 | INFO     | ready for new job
[2025-06-06 10:52:22] 2025-06-06 14:52:04,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 10:52:22] 2025-06-06 14:52:04,820 | INFO     | **************************************
[2025-06-06 10:52:22] 2025-06-06 14:52:04,820 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 10:52:22] 2025-06-06 14:52:04,820 | INFO     | **************************************
[2025-06-06 10:52:22] 2025-06-06 14:52:04,820 | INFO     | 
[2025-06-06 10:52:22] 2025-06-06 14:52:04,837 | INFO     | architecture information:
[2025-06-06 10:52:22] 2025-06-06 14:52:04,837 | INFO     | executing command: cat /etc/os-release
[2025-06-06 10:52:22] 2025-06-06 14:52:04,851 | INFO     | cat /etc/os-release:
[2025-06-06 10:52:22] NAME="CentOS Linux"
[2025-06-06 10:52:22] VERSION="7 (Core)"
[2025-06-06 10:52:22] ID="centos"
[2025-06-06 10:52:22] ID_LIKE="rhel fedora"
[2025-06-06 10:52:22] VERSION_ID="7"
[2025-06-06 10:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 10:52:22] ANSI_COLOR="0;31"
[2025-06-06 10:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 10:52:22] HOME_URL="https://www.centos.org/"
[2025-06-06 10:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 10:52:22] 
[2025-06-06 10:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 10:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 10:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 10:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 10:52:22] 
[2025-06-06 10:52:22] 2025-06-06 14:52:04,851 | INFO     | **************************************
[2025-06-06 10:52:22] 2025-06-06 14:52:05,353 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 10:52:22] 2025-06-06 14:52:05,372 | INFO     | sufficient remaining disk space (86492839936 B)
[2025-06-06 10:52:22] 2025-06-06 14:52:05,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 10:52:22] 2025-06-06 14:52:05,374 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 10:52:22] 2025-06-06 14:52:05,374 | INFO     | update_server=False
[2025-06-06 10:52:22] 2025-06-06 14:52:05,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 10:52:22] 2025-06-06 14:52:05,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 10:52:22] 2025-06-06 14:52:05,375 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 10:52:22] 2025-06-06 14:52:05,375 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 10:52:22] 2025-06-06 14:52:05,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 10:52:22] 2025-06-06 14:52:05,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 10:52:22] 2025-06-06 14:52:05,386 | INFO     | all job control threads have been joined
[2025-06-06 10:52:22] 2025-06-06 14:52:05,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 10:52:22] 2025-06-06 14:52:06,187 | INFO     | all data control threads have been joined
[2025-06-06 10:52:22] 2025-06-06 14:52:06,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:52:22] 2025-06-06 14:52:06,201 | INFO     | aborting loop
[2025-06-06 10:52:22] 2025-06-06 14:52:06,303 | INFO     | all payload control threads have been joined
[2025-06-06 10:52:22] 2025-06-06 14:52:06,380 | INFO     | [job] retrieve thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:06,387 | INFO     | [job] control thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:06,572 | INFO     | [payload] validate_post thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,192 | INFO     | [data] control thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,207 | INFO     | [job] job monitor thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,307 | INFO     | [payload] control thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,380 | INFO     | [data] copytool_out thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,394 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,434 | INFO     | [job] validate thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,487 | INFO     | [data] copytool_in thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,675 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,827 | INFO     | [payload] failed_post thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:07,866 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:08,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:52:22] 2025-06-06 14:52:09,296 | INFO     | [job] queue monitor thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:09,797 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:15,450 | INFO     | job.realtimelogging is not enabled
[2025-06-06 10:52:22] 2025-06-06 14:52:16,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 10:52:22] 2025-06-06 14:52:17,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140363972794176)>', '<ExcThread(monitor, started 140363331258112)>']
[2025-06-06 10:52:22] 2025-06-06 14:52:17,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 10:52:22] 2025-06-06 14:52:17,428 | INFO     | [monitor] control thread has ended
[2025-06-06 10:52:22] 2025-06-06 14:52:22,238 | INFO     | all workflow threads have been joined
[2025-06-06 10:52:22] 2025-06-06 14:52:22,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 10:52:22] 2025-06-06 14:52:22,239 | INFO     | traces error code: 0
[2025-06-06 10:52:22] 2025-06-06 14:52:22,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 10:52:22] 2025-06-06 14:52:22,396 [wrapper] ==== pilot stdout END ====
[2025-06-06 10:52:22] 2025-06-06 14:52:22,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 10:52:22] 2025-06-06 14:52:22,402 [wrapper] pilotpid: 2419150
[2025-06-06 10:52:22] 2025-06-06 14:52:22,404 [wrapper] Pilot exit status: 0
[2025-06-06 10:52:22] 2025-06-06 14:52:22,419 [wrapper] pandaids: 6669443622
[2025-06-06 10:52:22] 2025-06-06 14:52:22,493 [wrapper] cleanup supervisor_pilot 2740852 2419151
[2025-06-06 10:52:22] 2025-06-06 14:52:22,496 [wrapper] Test setup, not cleaning
[2025-06-06 10:52:22] 2025-06-06 14:52:22,499 [wrapper] apfmon messages muted
[2025-06-06 10:52:22] 2025-06-06 14:52:22,502 [wrapper] ==== wrapper stdout END ====
[2025-06-06 10:52:22] 2025-06-06 14:52:22,505 [wrapper] ==== wrapper stderr END ====
[2025-06-06 10:52:22]  *** Error codes and diagnostics ***
[2025-06-06 10:52:22]     "exeErrorCode": 0,
[2025-06-06 10:52:22]     "exeErrorDiag": "",
[2025-06-06 10:52:22]     "pilotErrorCode": 0,
[2025-06-06 10:52:22]     "pilotErrorDiag": "",
[2025-06-06 10:52:22]  *** Listing of results directory ***
[2025-06-06 10:52:22] total 414356
[2025-06-06 10:52:22] -rwx------. 1 boincer umatlas     37140 May 29 03:00 runpilot2-wrapper.sh
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas      5111 May 29 03:00 queuedata.json
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas    495897 May 29 03:00 pilot3.tar.gz
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas       100 Jun  6 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 10:52:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 09:31 run_atlas
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas       105 Jun  6 09:31 job.xml
[2025-06-06 10:52:22] -rw-r--r--. 2 boincer umatlas 225154618 Jun  6 09:31 EVNT.44871834._003803.pool.root.1
[2025-06-06 10:52:22] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 09:31 start_atlas.sh
[2025-06-06 10:52:22] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 09:31 shared
[2025-06-06 10:52:22] -rw-r--r--. 2 boincer umatlas    508866 Jun  6 09:31 input.tar.gz
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas         0 Jun  6 09:31 boinc_lockfile
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas      2558 Jun  6 09:31 pandaJob.out
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas    985728 Jun  6 09:32 agis_schedconf.cvmfs.json
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas   1598969 Jun  6 09:32 agis_ddmendpoints.agis.ALL.json
[2025-06-06 10:52:22] drwx------. 4 boincer umatlas      4096 Jun  6 09:32 pilot3
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas      6896 Jun  6 10:46 init_data.xml
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas 193737559 Jun  6 10:51 HITS.44871837._096500.pool.root.1
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas       529 Jun  6 10:51 boinc_task_state.xml
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas        95 Jun  6 10:51 pilot_heartbeat.json
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas      1032 Jun  6 10:51 memory_monitor_summary.json
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas    311157 Jun  6 10:51 log.44871837._096500.job.log.tgz.1
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas      7689 Jun  6 10:52 heartbeat.json
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas        27 Jun  6 10:52 wrapper_checkpoint.txt
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 10:52 boinc_mmap_file
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas      4548 Jun  6 10:52 pilotlog.txt
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas    473794 Jun  6 10:52 log.44871837._096500.job.log.1
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas       357 Jun  6 10:52 output.list
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas       620 Jun  6 10:52 runtime_log
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas    808960 Jun  6 10:52 result.tar.gz
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas       652 Jun  6 10:52 wIIMDmkQme7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLmUKDm0ilapn.diag
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas      8659 Jun  6 10:52 runtime_log.err
[2025-06-06 10:52:22] -rw-r--r--. 1 boincer umatlas     21353 Jun  6 10:52 stderr.txt
[2025-06-06 10:52:22] HITS file was successfully produced:
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas 193737559 Jun  6 10:51 shared/HITS.pool.root.1
[2025-06-06 10:52:22]  *** Contents of shared directory: ***
[2025-06-06 10:52:22] total 410396
[2025-06-06 10:52:22] -rw-r--r--. 2 boincer umatlas 225154618 Jun  6 09:31 ATLAS.root_0
[2025-06-06 10:52:22] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 09:31 start_atlas.sh
[2025-06-06 10:52:22] -rw-r--r--. 2 boincer umatlas    508866 Jun  6 09:31 input.tar.gz
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas 193737559 Jun  6 10:51 HITS.pool.root.1
[2025-06-06 10:52:22] -rw-------. 1 boincer umatlas    808960 Jun  6 10:52 result.tar.gz
10:52:24 (2415145): run_atlas exited; CPU time 35734.363456
10:52:24 (2415145): called boinc_finish(0)

</stderr_txt>
]]>

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