Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:37 (3652857): wrapper (7.7.26015): starting
09:31:37 (3652857): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 09:31:37] Arguments: --nthreads 12
[2025-06-06 09:31:37] Threads: 12
[2025-06-06 09:31:37] Checking for CVMFS
[2025-06-06 09:31:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 09:31:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 09:31:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 09:31:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 09:31:37] 2.12.6.0 40552 3741 185352 146860 0 240 21746783 32935936 10284 16776704 0 11201614 99.458 16624187 37361 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 09:31:37] CVMFS is ok
[2025-06-06 09:31:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 09:31:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 09:31:37] Further information can be found at the LHC@home message board.
[2025-06-06 09:31:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 09:31:37] Checking for apptainer binary...
[2025-06-06 09:31:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 09:31:37] Running /usr/bin/apptainer --version
[2025-06-06 09:31:37] apptainer version 1.4.1-1.el9
[2025-06-06 09:31:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 09:31:38] c6-1-26-4.aglt2.org
[2025-06-06 09:31:38] apptainer works
[2025-06-06 09:31:38] Set ATHENA_PROC_NUMBER=12
[2025-06-06 09:31:38] Set ATHENA_CORE_NUMBER=12
[2025-06-06 09:31:38] Starting ATLAS job with PandaID=6668229936
[2025-06-06 09:31:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 10:40:00]  *** The last 200 lines of the pilot log: ***
[2025-06-06 10:40:00]  scope=mc23_13p6TeV
[2025-06-06 10:40:00]  status=None
[2025-06-06 10:40:00]  status_code=0
[2025-06-06 10:40:00]  storage_token=
[2025-06-06 10:40:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668229936/log.44871837._080694.job.log.tgz.1
[2025-06-06 10:40:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/c9/log.44871837._080694.job.log.tgz.1
[2025-06-06 10:40:00]  workdir=None
[2025-06-06 10:40:00] ]
[2025-06-06 10:40:00] 2025-06-06 14:39:22,371 | INFO     | transferring file log.44871837._080694.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668229936/log.44871837._080694.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 10:40:00] 2025-06-06 14:39:22,371 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668229936/log.44871837._080694.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._080694.job
[2025-06-06 10:40:00] 2025-06-06 14:39:22,386 | INFO     | adding to output.list: log.44871837._080694.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/c9/log.44871837._080694.job.log.tg
[2025-06-06 10:40:00] 2025-06-06 14:39:22,387 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 10:40:00] 2025-06-06 14:39:22,387 | INFO     | summary of transferred files:
[2025-06-06 10:40:00] 2025-06-06 14:39:22,387 | INFO     |  -- lfn=log.44871837._080694.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 10:40:00] 2025-06-06 14:39:22,387 | INFO     | stage-out finished correctly
[2025-06-06 10:40:00] 2025-06-06 14:39:23,146 | WARNING  | process 3663661 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 10:40:00] 2025-06-06 14:39:23,146 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668229936/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 10:40:00] 2025-06-06 14:39:23,294 | INFO     | number of running child processes to parent process 3663661: 1
[2025-06-06 10:40:00] 2025-06-06 14:39:23,294 | INFO     | maximum number of monitored processes: 6
[2025-06-06 10:40:00] 2025-06-06 14:39:23,386 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 10:40:00] 2025-06-06 14:39:24,016 | INFO     | PID=3656490 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 10:40:00] 2025-06-06 14:39:24,016 | INFO     | .. there are 12 such processes running
[2025-06-06 10:40:00] 2025-06-06 14:39:24,470 | INFO     | job 6668229936 has state=finished
[2025-06-06 10:40:00] 2025-06-06 14:39:24,471 | INFO     | preparing for final server update for job 6668229936 in state='finished'
[2025-06-06 10:40:00] 2025-06-06 14:39:24,471 | INFO     | this job has now completed (state=finished)
[2025-06-06 10:40:00] 2025-06-06 14:39:24,471 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 10:40:00] 2025-06-06 14:39:24,471 | INFO     | log transfer has been attempted: DONE
[2025-06-06 10:40:00] 2025-06-06 14:39:24,471 | INFO     | job 6668229936 has finished - writing final server update
[2025-06-06 10:40:00] 2025-06-06 14:39:24,472 | INFO     | total number of processed events: 400 (read)
[2025-06-06 10:40:00] 2025-06-06 14:39:24,472 | INFO     | executing command: lscpu
[2025-06-06 10:40:00] 2025-06-06 14:39:24,516 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 10:40:00] 2025-06-06 14:39:25,797 | INFO     | monitor loop #304: job 0:6668229936 is in state 'finished'
[2025-06-06 10:40:00] 2025-06-06 14:39:25,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:40:00] 2025-06-06 14:39:28,301 | INFO     | monitor loop #305: job 0:6668229936 is in state 'finished'
[2025-06-06 10:40:00] 2025-06-06 14:39:28,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:40:00] 2025-06-06 14:39:28,461 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 10:40:00] 2025-06-06 14:39:28,463 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2835.85075
[2025-06-06 10:40:00] 2025-06-06 14:39:28,469 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668229936/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 10:40:00] 2025-06-06 14:39:28,469 | INFO     | extracted standard info from prmon json
[2025-06-06 10:40:00] 2025-06-06 14:39:28,470 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 10:40:00] 2025-06-06 14:39:28,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 10:40:00] 2025-06-06 14:39:28,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 10:40:00] 2025-06-06 14:39:28,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 10:40:00] 2025-06-06 14:39:28,471 | INFO     | fitting pss+swap vs Time
[2025-06-06 10:40:00] 2025-06-06 14:39:28,471 | INFO     | sum of square deviations: 63666310.0
[2025-06-06 10:40:00] 2025-06-06 14:39:28,471 | INFO     | sum of deviations: -8152172431.0
[2025-06-06 10:40:00] 2025-06-06 14:39:28,471 | INFO     | mean x: 1749218808.0
[2025-06-06 10:40:00] 2025-06-06 14:39:28,471 | INFO     | mean y: 2544397.13559322
[2025-06-06 10:40:00] 2025-06-06 14:39:28,471 | INFO     | -- intersect: 223981809763.1397
[2025-06-06 10:40:00] 2025-06-06 14:39:28,471 | INFO     | intersect: 223981809763.1397
[2025-06-06 10:40:00] 2025-06-06 14:39:28,471 | INFO     | chi2: 0.12583359279483367
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | -- intersect: 223981809763.1397
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | current memory leak: -128.05 B/s (using 59 data points, chi2=0.13)
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | could have reported an average CPU frequency of 2858 MHz (6 samples)
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | ..............................
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | . Timing measurements:
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | . get job = 0 s
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | . initial setup = 2 s
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | . payload setup = 6 s
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | . stage-in = 0 s
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | . payload execution = 4028 s
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | . stage-out = 0 s
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | . log creation = 0 s
[2025-06-06 10:40:00] 2025-06-06 14:39:28,472 | INFO     | ..............................
[2025-06-06 10:40:00] 2025-06-06 14:39:28,520 | INFO     | 
[2025-06-06 10:40:00] 2025-06-06 14:39:28,520 | INFO     | job summary report
[2025-06-06 10:40:00] 2025-06-06 14:39:28,520 | INFO     | --------------------------------------------------
[2025-06-06 10:40:00] 2025-06-06 14:39:28,520 | INFO     | PanDA job id: 6668229936
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | task id: 44871837
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | errors: (none)
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | pilot state: finished 
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | transexitcode: 0
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | exeerrorcode: 0
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | exeerrordiag: 
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | exitcode: 0
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | exitmsg: OK
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | cpuconsumptiontime: 44298 s
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | nevents: 400
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | neventsw: 0
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | pid: 3663661
[2025-06-06 10:40:00] 2025-06-06 14:39:28,521 | INFO     | pgrp: 3663661
[2025-06-06 10:40:00] 2025-06-06 14:39:28,522 | INFO     | corecount: 12
[2025-06-06 10:40:00] 2025-06-06 14:39:28,522 | INFO     | event service: False
[2025-06-06 10:40:00] 2025-06-06 14:39:28,522 | INFO     | sizes: {0: 2397733, 4: 2397995, 11: 2398023, 4038: 2423956, 4039: 2432897, 4040: 2432953, 4045: 2433275}
[2025-06-06 10:40:00] 2025-06-06 14:39:28,522 | INFO     | --------------------------------------------------
[2025-06-06 10:40:00] 2025-06-06 14:39:28,522 | INFO     | 
[2025-06-06 10:40:00] 2025-06-06 14:39:28,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 10:40:00] 2025-06-06 14:39:28,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 10:40:00] 2025-06-06 14:39:28,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 10:40:00] 2025-06-06 14:39:28,549 | INFO     | job 6668229936 has completed (purged errors)
[2025-06-06 10:40:00] 2025-06-06 14:39:28,549 | INFO     | overall cleanup function is called
[2025-06-06 10:40:00] 2025-06-06 14:39:29,559 | INFO     | --- collectZombieJob: --- 10, [3663661]
[2025-06-06 10:40:00] 2025-06-06 14:39:29,559 | INFO     | zombie collector waiting for pid 3663661
[2025-06-06 10:40:00] 2025-06-06 14:39:29,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 10:40:00] 2025-06-06 14:39:29,560 | INFO     | collected zombie processes
[2025-06-06 10:40:00] 2025-06-06 14:39:29,560 | INFO     | will attempt to kill all subprocesses of pid=3663661
[2025-06-06 10:40:00] 2025-06-06 14:39:29,779 | INFO     | process IDs to be killed: [3663661] (in reverse order)
[2025-06-06 10:40:00] 2025-06-06 14:39:29,844 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 10:40:00] 2025-06-06 14:39:29,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 10:40:00] 2025-06-06 14:39:29,851 | INFO     | did not find any defunct processes belonging to 3663661
[2025-06-06 10:40:00] 2025-06-06 14:39:29,858 | INFO     | did not find any defunct processes belonging to 3663661
[2025-06-06 10:40:00] 2025-06-06 14:39:29,858 | INFO     | ready for new job
[2025-06-06 10:40:00] 2025-06-06 14:39:29,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 10:40:00] 2025-06-06 14:39:29,859 | INFO     | ***************************************
[2025-06-06 10:40:00] 2025-06-06 14:39:29,859 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 10:40:00] 2025-06-06 14:39:29,859 | INFO     | ***************************************
[2025-06-06 10:40:00] 2025-06-06 14:39:29,860 | INFO     | 
[2025-06-06 10:40:00] 2025-06-06 14:39:29,874 | INFO     | architecture information:
[2025-06-06 10:40:00] 2025-06-06 14:39:29,874 | INFO     | executing command: cat /etc/os-release
[2025-06-06 10:40:00] 2025-06-06 14:39:29,885 | INFO     | cat /etc/os-release:
[2025-06-06 10:40:00] NAME="CentOS Linux"
[2025-06-06 10:40:00] VERSION="7 (Core)"
[2025-06-06 10:40:00] ID="centos"
[2025-06-06 10:40:00] ID_LIKE="rhel fedora"
[2025-06-06 10:40:00] VERSION_ID="7"
[2025-06-06 10:40:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 10:40:00] ANSI_COLOR="0;31"
[2025-06-06 10:40:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 10:40:00] HOME_URL="https://www.centos.org/"
[2025-06-06 10:40:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 10:40:00] 
[2025-06-06 10:40:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 10:40:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 10:40:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 10:40:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 10:40:00] 
[2025-06-06 10:40:00] 2025-06-06 14:39:29,885 | INFO     | ***************************************
[2025-06-06 10:40:00] 2025-06-06 14:39:30,388 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 10:40:00] 2025-06-06 14:39:30,403 | INFO     | sufficient remaining disk space (75859230720 B)
[2025-06-06 10:40:00] 2025-06-06 14:39:30,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 10:40:00] 2025-06-06 14:39:30,404 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 10:40:00] 2025-06-06 14:39:30,404 | INFO     | update_server=False
[2025-06-06 10:40:00] 2025-06-06 14:39:30,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 10:40:00] 2025-06-06 14:39:30,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 10:40:00] 2025-06-06 14:39:30,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:40:00] 2025-06-06 14:39:30,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 10:40:00] 2025-06-06 14:39:30,804 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 10:40:00] 2025-06-06 14:39:30,805 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 10:40:00] 2025-06-06 14:39:30,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:40:00] 2025-06-06 14:39:30,805 | INFO     | will abort loop
[2025-06-06 10:40:00] 2025-06-06 14:39:30,917 | INFO     | all payload control threads have been joined
[2025-06-06 10:40:00] 2025-06-06 14:39:31,182 | INFO     | all job control threads have been joined
[2025-06-06 10:40:00] 2025-06-06 14:39:31,379 | INFO     | all data control threads have been joined
[2025-06-06 10:40:00] 2025-06-06 14:39:31,409 | INFO     | [job] queue monitor thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:31,410 | INFO     | [job] retrieve thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:31,668 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:31,810 | INFO     | [job] job monitor thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:31,923 | INFO     | [payload] control thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,164 | INFO     | [data] copytool_in thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,183 | INFO     | [job] control thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,230 | INFO     | [job] validate thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,361 | INFO     | [payload] validate_post thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,384 | INFO     | [data] control thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,445 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,452 | INFO     | [data] copytool_out thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,656 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:32,741 | INFO     | [payload] failed_post thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:34,411 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 10:40:00] 2025-06-06 14:39:35,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139931122952000)>', '<ExcThread(monitor, started 139930495870720)>']
[2025-06-06 10:40:00] 2025-06-06 14:39:40,265 | INFO     | all workflow threads have been joined
[2025-06-06 10:40:00] 2025-06-06 14:39:40,265 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 10:40:00] 2025-06-06 14:39:40,265 | INFO     | traces error code: 0
[2025-06-06 10:40:00] 2025-06-06 14:39:40,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 10:40:00] 2025-06-06 14:40:00,372 | INFO     | PID=3656490 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 10:40:00] 2025-06-06 14:40:00,373 | INFO     | .. there are 12 such processes running
[2025-06-06 10:40:00] 2025-06-06 14:40:00,373 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 10:40:00] 2025-06-06 14:40:00,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 10:40:00] 2025-06-06 14:40:00,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 10:40:00] 2025-06-06 14:40:00,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 10:40:00] 2025-06-06 14:40:00,374 | INFO     | [monitor] control thread has ended
[2025-06-06 10:40:00] 2025-06-06 14:40:00,513 [wrapper] ==== pilot stdout END ====
[2025-06-06 10:40:00] 2025-06-06 14:40:00,515 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 10:40:00] 2025-06-06 14:40:00,517 [wrapper] pilotpid: 3656490
[2025-06-06 10:40:00] 2025-06-06 14:40:00,519 [wrapper] Pilot exit status: 0
[2025-06-06 10:40:00] 2025-06-06 14:40:00,527 [wrapper] pandaids: 6668229936
[2025-06-06 10:40:00] 2025-06-06 14:40:00,572 [wrapper] cleanup supervisor_pilot 3855018 3656491
[2025-06-06 10:40:00] 2025-06-06 14:40:00,576 [wrapper] Test setup, not cleaning
[2025-06-06 10:40:00] 2025-06-06 14:40:00,580 [wrapper] apfmon messages muted
[2025-06-06 10:40:00] 2025-06-06 14:40:00,585 [wrapper] ==== wrapper stdout END ====
[2025-06-06 10:40:00] 2025-06-06 14:40:00,588 [wrapper] ==== wrapper stderr END ====
[2025-06-06 10:40:00]  *** Error codes and diagnostics ***
[2025-06-06 10:40:00]     "exeErrorCode": 0,
[2025-06-06 10:40:00]     "exeErrorDiag": "",
[2025-06-06 10:40:00]     "pilotErrorCode": 0,
[2025-06-06 10:40:00]     "pilotErrorDiag": "",
[2025-06-06 10:40:00]  *** Listing of results directory ***
[2025-06-06 10:40:00] total 419888
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas    529402 Jun  6 09:11 pilot3.tar.gz
[2025-06-06 10:40:00] -rwx------. 1 boincer umatlas     37140 Jun  6 09:31 runpilot2-wrapper.sh
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas      5112 Jun  6 09:31 queuedata.json
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas       100 Jun  6 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 10:40:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 09:31 run_atlas
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas       105 Jun  6 09:31 job.xml
[2025-06-06 10:40:00] -rw-r--r--. 2 boincer umatlas 223249699 Jun  6 09:31 EVNT.44871834._003150.pool.root.1
[2025-06-06 10:40:00] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 09:31 start_atlas.sh
[2025-06-06 10:40:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 09:31 shared
[2025-06-06 10:40:00] -rw-r--r--. 2 boincer umatlas    541914 Jun  6 09:31 input.tar.gz
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas         0 Jun  6 09:31 boinc_lockfile
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 09:31 pandaJob.out
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas    985728 Jun  6 09:31 agis_schedconf.cvmfs.json
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas   1598969 Jun  6 09:31 agis_ddmendpoints.agis.ALL.json
[2025-06-06 10:40:00] drwx------. 4 boincer umatlas      4096 Jun  6 09:31 pilot3
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas      6841 Jun  6 10:36 init_data.xml
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas 201263704 Jun  6 10:38 HITS.44871837._080694.pool.root.1
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas       530 Jun  6 10:38 boinc_task_state.xml
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas      1038 Jun  6 10:39 memory_monitor_summary.json
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas    366832 Jun  6 10:39 log.44871837._080694.job.log.tgz.1
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas      7757 Jun  6 10:39 heartbeat.json
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 10:39 boinc_mmap_file
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas        27 Jun  6 10:39 wrapper_checkpoint.txt
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas       823 Jun  6 10:40 pilotlog.txt
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas        95 Jun  6 10:40 pilot_heartbeat.json
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas    414113 Jun  6 10:40 log.44871837._080694.job.log.1
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas       357 Jun  6 10:40 output.list
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas       620 Jun  6 10:40 runtime_log
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas    798720 Jun  6 10:40 result.tar.gz
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas      8667 Jun  6 10:40 runtime_log.err
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas       654 Jun  6 10:40 0euMDmBLmh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmz5aKDmWw3W7m.diag
[2025-06-06 10:40:00] -rw-r--r--. 1 boincer umatlas     22048 Jun  6 10:40 stderr.txt
[2025-06-06 10:40:00] HITS file was successfully produced:
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas 201263704 Jun  6 10:38 shared/HITS.pool.root.1
[2025-06-06 10:40:00]  *** Contents of shared directory: ***
[2025-06-06 10:40:00] total 415900
[2025-06-06 10:40:00] -rw-r--r--. 2 boincer umatlas 223249699 Jun  6 09:31 ATLAS.root_0
[2025-06-06 10:40:00] -rw-r--r--. 2 boincer umatlas     15095 Jun  6 09:31 start_atlas.sh
[2025-06-06 10:40:00] -rw-r--r--. 2 boincer umatlas    541914 Jun  6 09:31 input.tar.gz
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas 201263704 Jun  6 10:38 HITS.pool.root.1
[2025-06-06 10:40:00] -rw-------. 1 boincer umatlas    798720 Jun  6 10:40 result.tar.gz
10:40:02 (3652857): run_atlas exited; CPU time 44362.993391
10:40:02 (3652857): called boinc_finish(0)

</stderr_txt>
]]>

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