Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:29:51 (1830718): wrapper (7.7.26015): starting
09:29:51 (1830718): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 09:29:51] Arguments: --nthreads 8
[2025-06-06 09:29:51] Threads: 8
[2025-06-06 09:29:51] Checking for CVMFS
[2025-06-06 09:29:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 09:29:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 09:29:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 09:29:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 09:29:51] 2.12.6.0 5676 4281 274900 146860 1 78 26216958 32935936 11225 16776704 0 31596992 99.863 12051908 39079 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 09:29:51] CVMFS is ok
[2025-06-06 09:29:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 09:29:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 09:29:51] Further information can be found at the LHC@home message board.
[2025-06-06 09:29:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 09:29:51] Checking for apptainer binary...
[2025-06-06 09:29:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 09:29:51] Running /usr/bin/apptainer --version
[2025-06-06 09:29:52] apptainer version 1.4.1-1.el9
[2025-06-06 09:29:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 09:29:52] c7-3-28.aglt2.org
[2025-06-06 09:29:52] apptainer works
[2025-06-06 09:29:52] Set ATHENA_PROC_NUMBER=8
[2025-06-06 09:29:52] Set ATHENA_CORE_NUMBER=8
[2025-06-06 09:29:52] Starting ATLAS job with PandaID=6678362723
[2025-06-06 09:29:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 10:14:19]  *** The last 200 lines of the pilot log: ***
[2025-06-06 10:14:19]  is_tar=False
[2025-06-06 10:14:19]  lfn=log.45006595._053218.job.log.tgz.1
[2025-06-06 10:14:19]  mtime=0
[2025-06-06 10:14:19]  protocol_id=None
[2025-06-06 10:14:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 10:14:19]  replicas=None
[2025-06-06 10:14:19]  scope=mc23_13p6TeV
[2025-06-06 10:14:19]  status=None
[2025-06-06 10:14:19]  status_code=0
[2025-06-06 10:14:19]  storage_token=
[2025-06-06 10:14:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678362723/log.45006595._053218.job.log.tgz.1
[2025-06-06 10:14:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/ab/log.45006595._053218.job.log.tgz.1
[2025-06-06 10:14:19]  workdir=None
[2025-06-06 10:14:19] ]
[2025-06-06 10:14:19] 2025-06-06 14:13:53,470 | INFO     | transferring file log.45006595._053218.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678362723/log.45006595._053218.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 10:14:19] 2025-06-06 14:13:53,470 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678362723/log.45006595._053218.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053218.job
[2025-06-06 10:14:19] 2025-06-06 14:13:53,483 | INFO     | adding to output.list: log.45006595._053218.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/ab/log.45006595._053218.job.log.tg
[2025-06-06 10:14:19] 2025-06-06 14:13:53,483 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 10:14:19] 2025-06-06 14:13:53,483 | INFO     | summary of transferred files:
[2025-06-06 10:14:19] 2025-06-06 14:13:53,483 | INFO     |  -- lfn=log.45006595._053218.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 10:14:19] 2025-06-06 14:13:53,483 | INFO     | stage-out finished correctly
[2025-06-06 10:14:19] 2025-06-06 14:13:53,521 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 10:14:19] 2025-06-06 14:13:54,037 | INFO     | monitor loop #198: job 0:6678362723 is in state 'finished'
[2025-06-06 10:14:19] 2025-06-06 14:13:54,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:14:19] 2025-06-06 14:13:55,778 | INFO     | job 6678362723 has state=finished
[2025-06-06 10:14:19] 2025-06-06 14:13:55,778 | INFO     | preparing for final server update for job 6678362723 in state='finished'
[2025-06-06 10:14:19] 2025-06-06 14:13:55,778 | INFO     | this job has now completed (state=finished)
[2025-06-06 10:14:19] 2025-06-06 14:13:55,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 10:14:19] 2025-06-06 14:13:55,778 | INFO     | log transfer has been attempted: DONE
[2025-06-06 10:14:19] 2025-06-06 14:13:55,778 | INFO     | job 6678362723 has finished - writing final server update
[2025-06-06 10:14:19] 2025-06-06 14:13:55,779 | INFO     | total number of processed events: 400 (read)
[2025-06-06 10:14:19] 2025-06-06 14:13:55,795 | INFO     | executing command: lscpu
[2025-06-06 10:14:19] 2025-06-06 14:13:55,876 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 10:14:19] 2025-06-06 14:13:56,540 | INFO     | monitor loop #199: job 0:6678362723 is in state 'finished'
[2025-06-06 10:14:19] 2025-06-06 14:13:56,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:14:19] 2025-06-06 14:13:59,043 | INFO     | monitor loop #200: job 0:6678362723 is in state 'finished'
[2025-06-06 10:14:19] 2025-06-06 14:13:59,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 10:14:19] 2025-06-06 14:13:59,115 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 10:14:19] 2025-06-06 14:13:59,115 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678362723/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 10:14:19] 2025-06-06 14:13:59,116 | INFO     | extracted standard info from prmon json
[2025-06-06 10:14:19] 2025-06-06 14:13:59,116 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 10:14:19] 2025-06-06 14:13:59,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 10:14:19] 2025-06-06 14:13:59,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 10:14:19] 2025-06-06 14:13:59,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 10:14:19] 2025-06-06 14:13:59,117 | INFO     | fitting pss+swap vs Time
[2025-06-06 10:14:19] 2025-06-06 14:13:59,117 | INFO     | sum of square deviations: 14456085.0
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | sum of deviations: -3907028406.0
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | mean x: 1749217998.5
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | mean y: 2450477.5555555555
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | -- intersect: 472761458772.39923
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | intersect: 472761458772.39923
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | chi2: 0.07949419238992608
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | -- intersect: 472761458772.39923
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | current memory leak: -270.27 B/s (using 36 data points, chi2=0.08)
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | ..............................
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | . Timing measurements:
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | . get job = 0 s
[2025-06-06 10:14:19] 2025-06-06 14:13:59,118 | INFO     | . initial setup = 2 s
[2025-06-06 10:14:19] 2025-06-06 14:13:59,119 | INFO     | . payload setup = 6 s
[2025-06-06 10:14:19] 2025-06-06 14:13:59,119 | INFO     | . stage-in = 0 s
[2025-06-06 10:14:19] 2025-06-06 14:13:59,119 | INFO     | . payload execution = 2606 s
[2025-06-06 10:14:19] 2025-06-06 14:13:59,119 | INFO     | . stage-out = 0 s
[2025-06-06 10:14:19] 2025-06-06 14:13:59,119 | INFO     | . log creation = 0 s
[2025-06-06 10:14:19] 2025-06-06 14:13:59,119 | INFO     | ..............................
[2025-06-06 10:14:19] 2025-06-06 14:13:59,188 | INFO     | 
[2025-06-06 10:14:19] 2025-06-06 14:13:59,188 | INFO     | job summary report
[2025-06-06 10:14:19] 2025-06-06 14:13:59,188 | INFO     | --------------------------------------------------
[2025-06-06 10:14:19] 2025-06-06 14:13:59,188 | INFO     | PanDA job id: 6678362723
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | task id: 45006595
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | errors: (none)
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | pilot state: finished 
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | transexitcode: 0
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | exeerrorcode: 0
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | exeerrordiag: 
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | exitcode: 0
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | exitmsg: OK
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | cpuconsumptiontime: 19205 s
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | nevents: 400
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | neventsw: 0
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | pid: 1842671
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | pgrp: 1842671
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | corecount: 8
[2025-06-06 10:14:19] 2025-06-06 14:13:59,189 | INFO     | event service: False
[2025-06-06 10:14:19] 2025-06-06 14:13:59,190 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 2616: 2422786, 2617: 2431727, 2618: 2431783, 2623: 2432081}
[2025-06-06 10:14:19] 2025-06-06 14:13:59,190 | INFO     | --------------------------------------------------
[2025-06-06 10:14:19] 2025-06-06 14:13:59,190 | INFO     | 
[2025-06-06 10:14:19] 2025-06-06 14:13:59,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 10:14:19] 2025-06-06 14:13:59,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | job 6678362723 has completed (purged errors)
[2025-06-06 10:14:19] 2025-06-06 14:13:59,211 | INFO     | overall cleanup function is called
[2025-06-06 10:14:19] 2025-06-06 14:14:00,219 | INFO     | --- collectZombieJob: --- 10, [1842671]
[2025-06-06 10:14:19] 2025-06-06 14:14:00,219 | INFO     | zombie collector waiting for pid 1842671
[2025-06-06 10:14:19] 2025-06-06 14:14:00,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 10:14:19] 2025-06-06 14:14:00,220 | INFO     | collected zombie processes
[2025-06-06 10:14:19] 2025-06-06 14:14:00,220 | INFO     | will attempt to kill all subprocesses of pid=1842671
[2025-06-06 10:14:19] 2025-06-06 14:14:00,537 | INFO     | process IDs to be killed: [1842671] (in reverse order)
[2025-06-06 10:14:19] 2025-06-06 14:14:00,641 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 10:14:19] 2025-06-06 14:14:00,641 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 10:14:19] 2025-06-06 14:14:00,656 | INFO     | did not find any defunct processes belonging to 1842671
[2025-06-06 10:14:19] 2025-06-06 14:14:00,669 | INFO     | did not find any defunct processes belonging to 1842671
[2025-06-06 10:14:19] 2025-06-06 14:14:00,670 | INFO     | ready for new job
[2025-06-06 10:14:19] 2025-06-06 14:14:00,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 10:14:19] 2025-06-06 14:14:00,671 | INFO     | **************************************
[2025-06-06 10:14:19] 2025-06-06 14:14:00,671 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 10:14:19] 2025-06-06 14:14:00,671 | INFO     | **************************************
[2025-06-06 10:14:19] 2025-06-06 14:14:00,671 | INFO     | 
[2025-06-06 10:14:19] 2025-06-06 14:14:00,687 | INFO     | architecture information:
[2025-06-06 10:14:19] 2025-06-06 14:14:00,687 | INFO     | executing command: cat /etc/os-release
[2025-06-06 10:14:19] 2025-06-06 14:14:00,700 | INFO     | cat /etc/os-release:
[2025-06-06 10:14:19] NAME="CentOS Linux"
[2025-06-06 10:14:19] VERSION="7 (Core)"
[2025-06-06 10:14:19] ID="centos"
[2025-06-06 10:14:19] ID_LIKE="rhel fedora"
[2025-06-06 10:14:19] VERSION_ID="7"
[2025-06-06 10:14:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 10:14:19] ANSI_COLOR="0;31"
[2025-06-06 10:14:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 10:14:19] HOME_URL="https://www.centos.org/"
[2025-06-06 10:14:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 10:14:19] 
[2025-06-06 10:14:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 10:14:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 10:14:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 10:14:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 10:14:19] 
[2025-06-06 10:14:19] 2025-06-06 14:14:00,701 | INFO     | **************************************
[2025-06-06 10:14:19] 2025-06-06 14:14:01,201 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 10:14:19] 2025-06-06 14:14:01,213 | INFO     | sufficient remaining disk space (76653002752 B)
[2025-06-06 10:14:19] 2025-06-06 14:14:01,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 10:14:19] 2025-06-06 14:14:01,214 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 10:14:19] 2025-06-06 14:14:01,214 | INFO     | update_server=False
[2025-06-06 10:14:19] 2025-06-06 14:14:01,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 10:14:19] 2025-06-06 14:14:01,214 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 10:14:19] 2025-06-06 14:14:01,214 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 10:14:19] 2025-06-06 14:14:01,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 10:14:19] 2025-06-06 14:14:01,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 10:14:19] 2025-06-06 14:14:01,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 10:14:19] 2025-06-06 14:14:01,546 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 10:14:19] 2025-06-06 14:14:01,546 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 10:14:19] 2025-06-06 14:14:01,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:14:19] 2025-06-06 14:14:01,546 | INFO     | will abort loop
[2025-06-06 10:14:19] 2025-06-06 14:14:01,890 | INFO     | all data control threads have been joined
[2025-06-06 10:14:19] 2025-06-06 14:14:02,219 | INFO     | [job] retrieve thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:02,285 | INFO     | all job control threads have been joined
[2025-06-06 10:14:19] 2025-06-06 14:14:02,380 | INFO     | all payload control threads have been joined
[2025-06-06 10:14:19] 2025-06-06 14:14:02,438 | INFO     | [payload] validate_post thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:02,542 | INFO     | [payload] failed_post thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:02,551 | INFO     | [job] job monitor thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:02,896 | INFO     | [data] control thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:02,936 | INFO     | [job] validate thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:03,244 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:03,281 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:03,282 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:03,292 | INFO     | [job] control thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:03,386 | INFO     | [payload] control thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:03,537 | INFO     | [data] copytool_out thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:03,607 | INFO     | [data] copytool_in thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:04,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 10:14:19] 2025-06-06 14:14:04,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:14:19] 2025-06-06 14:14:05,204 | INFO     | [job] queue monitor thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:08,102 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:11,830 | INFO     | job.realtimelogging is not enabled
[2025-06-06 10:14:19] 2025-06-06 14:14:12,836 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 10:14:19] 2025-06-06 14:14:14,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972002678592)>', '<ExcThread(monitor, started 139971239343872)>']
[2025-06-06 10:14:19] 2025-06-06 14:14:15,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 10:14:19] 2025-06-06 14:14:15,285 | INFO     | [monitor] control thread has ended
[2025-06-06 10:14:19] 2025-06-06 14:14:19,574 | INFO     | all workflow threads have been joined
[2025-06-06 10:14:19] 2025-06-06 14:14:19,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 10:14:19] 2025-06-06 14:14:19,575 | INFO     | traces error code: 0
[2025-06-06 10:14:19] 2025-06-06 14:14:19,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 10:14:19] 2025-06-06 14:14:19,665 [wrapper] ==== pilot stdout END ====
[2025-06-06 10:14:19] 2025-06-06 14:14:19,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 10:14:19] 2025-06-06 14:14:19,671 [wrapper] pilotpid: 1834797
[2025-06-06 10:14:19] 2025-06-06 14:14:19,673 [wrapper] Pilot exit status: 0
[2025-06-06 10:14:19] 2025-06-06 14:14:19,682 [wrapper] pandaids: 6678362723
[2025-06-06 10:14:19] 2025-06-06 14:14:19,762 [wrapper] cleanup supervisor_pilot 1880998 1834798
[2025-06-06 10:14:19] 2025-06-06 14:14:19,766 [wrapper] Test setup, not cleaning
[2025-06-06 10:14:19] 2025-06-06 14:14:19,769 [wrapper] apfmon messages muted
[2025-06-06 10:14:19] 2025-06-06 14:14:19,772 [wrapper] ==== wrapper stdout END ====
[2025-06-06 10:14:19] 2025-06-06 14:14:19,773 [wrapper] ==== wrapper stderr END ====
[2025-06-06 10:14:19]  *** Error codes and diagnostics ***
[2025-06-06 10:14:19]     "exeErrorCode": 0,
[2025-06-06 10:14:19]     "exeErrorDiag": "",
[2025-06-06 10:14:19]     "pilotErrorCode": 0,
[2025-06-06 10:14:19]     "pilotErrorDiag": "",
[2025-06-06 10:14:19]  *** Listing of results directory ***
[2025-06-06 10:14:19] total 386420
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-06 10:14:19] -rwx------. 1 boincer umatlas     37140 Jun  4 01:17 runpilot2-wrapper.sh
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:17 queuedata.json
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas       100 Jun  6 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 10:14:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 09:29 run_atlas
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas       105 Jun  6 09:29 job.xml
[2025-06-06 10:14:19] -rw-r--r--. 2 boincer umatlas 214802496 Jun  6 09:29 EVNT.45006593._002130.pool.root.1
[2025-06-06 10:14:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 09:29 start_atlas.sh
[2025-06-06 10:14:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 09:29 shared
[2025-06-06 10:14:19] -rw-r--r--. 2 boincer umatlas    508884 Jun  6 09:29 input.tar.gz
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas         0 Jun  6 09:29 boinc_lockfile
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas      2525 Jun  6 09:29 pandaJob.out
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas    985728 Jun  6 09:29 agis_schedconf.cvmfs.json
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas   1598969 Jun  6 09:30 agis_ddmendpoints.agis.ALL.json
[2025-06-06 10:14:19] drwx------. 4 boincer umatlas      4096 Jun  6 09:30 pilot3
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas      6933 Jun  6 10:10 init_data.xml
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas 175935959 Jun  6 10:13 HITS.45006595._053218.pool.root.1
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas       529 Jun  6 10:13 boinc_task_state.xml
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas      1018 Jun  6 10:13 memory_monitor_summary.json
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas    280573 Jun  6 10:13 log.45006595._053218.job.log.tgz.1
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas        95 Jun  6 10:13 pilot_heartbeat.json
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 10:13 boinc_mmap_file
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas        27 Jun  6 10:13 wrapper_checkpoint.txt
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas      7677 Jun  6 10:13 heartbeat.json
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas      4734 Jun  6 10:14 pilotlog.txt
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas    282331 Jun  6 10:14 log.45006595._053218.job.log.1
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas       357 Jun  6 10:14 output.list
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas       620 Jun  6 10:14 runtime_log
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas    583680 Jun  6 10:14 result.tar.gz
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas      8654 Jun  6 10:14 runtime_log.err
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas       650 Jun  6 10:14 FuNMDmagvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFlaKDmTETfen.diag
[2025-06-06 10:14:19] -rw-r--r--. 1 boincer umatlas     21471 Jun  6 10:14 stderr.txt
[2025-06-06 10:14:19] HITS file was successfully produced:
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas 175935959 Jun  6 10:13 shared/HITS.pool.root.1
[2025-06-06 10:14:19]  *** Contents of shared directory: ***
[2025-06-06 10:14:19] total 382676
[2025-06-06 10:14:19] -rw-r--r--. 2 boincer umatlas 214802496 Jun  6 09:29 ATLAS.root_0
[2025-06-06 10:14:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 09:29 start_atlas.sh
[2025-06-06 10:14:19] -rw-r--r--. 2 boincer umatlas    508884 Jun  6 09:29 input.tar.gz
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas 175935959 Jun  6 10:13 HITS.pool.root.1
[2025-06-06 10:14:19] -rw-------. 1 boincer umatlas    583680 Jun  6 10:14 result.tar.gz
10:14:21 (1830718): run_atlas exited; CPU time 19245.266288
10:14:21 (1830718): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN