Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:20:12 (833654): wrapper (7.7.26015): starting
09:20:12 (833654): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 09:20:12] Arguments: --nthreads 12
[2025-06-06 09:20:12] Threads: 12
[2025-06-06 09:20:12] Checking for CVMFS
[2025-06-06 09:20:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 09:20:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 09:20:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 09:20:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 09:20:13] 2.12.6.0 5616 3753 189628 146860 0 439 29967449 32935937 18292 16776704 0 15000306 99.532 15135036 31666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 09:20:13] CVMFS is ok
[2025-06-06 09:20:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 09:20:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 09:20:13] Further information can be found at the LHC@home message board.
[2025-06-06 09:20:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 09:20:13] Checking for apptainer binary...
[2025-06-06 09:20:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 09:20:13] Running /usr/bin/apptainer --version
[2025-06-06 09:20:13] apptainer version 1.4.1-1.el9
[2025-06-06 09:20:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 09:20:14] c6-1-24-1.aglt2.org
[2025-06-06 09:20:14] apptainer works
[2025-06-06 09:20:14] Set ATHENA_PROC_NUMBER=12
[2025-06-06 09:20:14] Set ATHENA_CORE_NUMBER=12
[2025-06-06 09:20:14] Starting ATLAS job with PandaID=6669443590
[2025-06-06 09:20:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:07:26]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:07:26] 2025-06-06 15:07:01,129 | INFO     | monitor loop #449: job 0:6669443590 is in state 'finished'
[2025-06-06 11:07:26] 2025-06-06 15:07:01,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:07:26] 2025-06-06 15:07:03,633 | INFO     | monitor loop #450: job 0:6669443590 is in state 'finished'
[2025-06-06 11:07:26] 2025-06-06 15:07:03,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:07:26] 2025-06-06 15:07:06,139 | INFO     | monitor loop #451: job 0:6669443590 is in state 'finished'
[2025-06-06 11:07:26] 2025-06-06 15:07:06,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:07:26] 2025-06-06 15:07:08,646 | INFO     | monitor loop #452: job 0:6669443590 is in state 'finished'
[2025-06-06 11:07:26] 2025-06-06 15:07:08,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,101 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 11:07:26] 2025-06-06 15:07:10,101 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669443590/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,102 | INFO     | extracted standard info from prmon json
[2025-06-06 11:07:26] 2025-06-06 15:07:10,102 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:07:26] 2025-06-06 15:07:10,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:07:26] 2025-06-06 15:07:10,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:07:26] 2025-06-06 15:07:10,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:07:26] 2025-06-06 15:07:10,105 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:07:26] 2025-06-06 15:07:10,106 | INFO     | sum of square deviations: 348733594.6153839
[2025-06-06 11:07:26] 2025-06-06 15:07:10,106 | INFO     | sum of deviations: -10960692581.846153
[2025-06-06 11:07:26] 2025-06-06 15:07:10,106 | INFO     | mean x: 1749219257.6153846
[2025-06-06 11:07:26] 2025-06-06 15:07:10,107 | INFO     | mean y: 2394611.403846154
[2025-06-06 11:07:26] 2025-06-06 15:07:10,107 | INFO     | -- intersect: 54980334325.2785
[2025-06-06 11:07:26] 2025-06-06 15:07:10,107 | INFO     | intersect: 54980334325.2785
[2025-06-06 11:07:26] 2025-06-06 15:07:10,107 | INFO     | chi2: 2.732263241566568
[2025-06-06 11:07:26] 2025-06-06 15:07:10,107 | INFO     | sum of square deviations: 300810774.54545367
[2025-06-06 11:07:26] 2025-06-06 15:07:10,108 | INFO     | sum of deviations: -1675615542.909092
[2025-06-06 11:07:26] 2025-06-06 15:07:10,108 | INFO     | mean x: 1749219105.121212
[2025-06-06 11:07:26] 2025-06-06 15:07:10,108 | INFO     | mean y: 2423460.909090909
[2025-06-06 11:07:26] 2025-06-06 15:07:10,108 | INFO     | -- intersect: 9746152637.244652
[2025-06-06 11:07:26] 2025-06-06 15:07:10,108 | INFO     | intersect: 9746152637.244652
[2025-06-06 11:07:26] 2025-06-06 15:07:10,108 | INFO     | chi2: 2.066616100248528
[2025-06-06 11:07:26] 2025-06-06 15:07:10,108 | INFO     | current chi2=2.066616100248528 (change=24.362482032894654 %)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,109 | INFO     | right removable region: 98
[2025-06-06 11:07:26] 2025-06-06 15:07:10,109 | INFO     | sum of square deviations: 300803454.54545367
[2025-06-06 11:07:26] 2025-06-06 15:07:10,109 | INFO     | sum of deviations: -28704548591.787872
[2025-06-06 11:07:26] 2025-06-06 15:07:10,110 | INFO     | mean x: 1749219410.121212
[2025-06-06 11:07:26] 2025-06-06 15:07:10,110 | INFO     | mean y: 2450209.898989899
[2025-06-06 11:07:26] 2025-06-06 15:07:10,110 | INFO     | -- intersect: 166923916026.82715
[2025-06-06 11:07:26] 2025-06-06 15:07:10,110 | INFO     | intersect: 166923916026.82715
[2025-06-06 11:07:26] 2025-06-06 15:07:10,110 | INFO     | chi2: 0.9468577066038506
[2025-06-06 11:07:26] 2025-06-06 15:07:10,110 | INFO     | current chi2=0.9468577066038506 (change=65.3452971807738 %)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,110 | INFO     | sum of square deviations: 257484212.21276584
[2025-06-06 11:07:26] 2025-06-06 15:07:10,111 | INFO     | sum of deviations: -27730586059.14894
[2025-06-06 11:07:26] 2025-06-06 15:07:10,111 | INFO     | mean x: 1749219562.6170213
[2025-06-06 11:07:26] 2025-06-06 15:07:10,111 | INFO     | mean y: 2446494.9680851065
[2025-06-06 11:07:26] 2025-06-06 15:07:10,111 | INFO     | -- intersect: 188390243947.2472
[2025-06-06 11:07:26] 2025-06-06 15:07:10,111 | INFO     | intersect: 188390243947.2472
[2025-06-06 11:07:26] 2025-06-06 15:07:10,111 | INFO     | chi2: 0.8854419818435592
[2025-06-06 11:07:26] 2025-06-06 15:07:10,111 | INFO     | current chi2=0.8854419818435592 (change=6.486267612540725 %)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,111 | INFO     | left removable region: 20
[2025-06-06 11:07:26] 2025-06-06 15:07:10,112 | INFO     | sum of square deviations: 147124775.29487178
[2025-06-06 11:07:26] 2025-06-06 15:07:10,112 | INFO     | sum of deviations: -12189977756.08974
[2025-06-06 11:07:26] 2025-06-06 15:07:10,112 | INFO     | mean x: 1749219684.5512822
[2025-06-06 11:07:26] 2025-06-06 15:07:10,112 | INFO     | mean y: 2455642.3974358975
[2025-06-06 11:07:26] 2025-06-06 15:07:10,112 | INFO     | -- intersect: 144933511628.43625
[2025-06-06 11:07:26] 2025-06-06 15:07:10,112 | INFO     | intersect: 144933511628.43625
[2025-06-06 11:07:26] 2025-06-06 15:07:10,112 | INFO     | chi2: 0.17947149856921846
[2025-06-06 11:07:26] 2025-06-06 15:07:10,113 | INFO     | -- intersect: 144933511628.43625
[2025-06-06 11:07:26] 2025-06-06 15:07:10,113 | INFO     | current memory leak: -82.85 B/s (using 78 data points, chi2=0.18)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,113 | INFO     | ..............................
[2025-06-06 11:07:26] 2025-06-06 15:07:10,113 | INFO     | . Timing measurements:
[2025-06-06 11:07:26] 2025-06-06 15:07:10,113 | INFO     | . get job = 0 s
[2025-06-06 11:07:26] 2025-06-06 15:07:10,114 | INFO     | . initial setup = 4 s
[2025-06-06 11:07:26] 2025-06-06 15:07:10,114 | INFO     | . payload setup = 19 s
[2025-06-06 11:07:26] 2025-06-06 15:07:10,114 | INFO     | . stage-in = 0 s
[2025-06-06 11:07:26] 2025-06-06 15:07:10,114 | INFO     | . payload execution = 6309 s
[2025-06-06 11:07:26] 2025-06-06 15:07:10,114 | INFO     | . stage-out = 1 s
[2025-06-06 11:07:26] 2025-06-06 15:07:10,114 | INFO     | . log creation = 0 s
[2025-06-06 11:07:26] 2025-06-06 15:07:10,114 | INFO     | ..............................
[2025-06-06 11:07:26] 2025-06-06 15:07:10,205 | INFO     | 
[2025-06-06 11:07:26] 2025-06-06 15:07:10,205 | INFO     | job summary report
[2025-06-06 11:07:26] 2025-06-06 15:07:10,205 | INFO     | --------------------------------------------------
[2025-06-06 11:07:26] 2025-06-06 15:07:10,205 | INFO     | PanDA job id: 6669443590
[2025-06-06 11:07:26] 2025-06-06 15:07:10,205 | INFO     | task id: 44871837
[2025-06-06 11:07:26] 2025-06-06 15:07:10,205 | INFO     | errors: (none)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | pilot state: finished 
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | transexitcode: 0
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | exeerrorcode: 0
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | exeerrordiag: 
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | exitcode: 0
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | exitmsg: OK
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | cpuconsumptiontime: 48512 s
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | nevents: 400
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | neventsw: 0
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | pid: 856274
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | pgrp: 856274
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | corecount: 12
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | event service: False
[2025-06-06 11:07:26] 2025-06-06 15:07:10,206 | INFO     | sizes: {0: 2397220, 1: 2397419, 12: 2397653, 23: 2397653, 6332: 2424423, 6333: 2424422, 6334: 2433547, 6335: 2433603, 6349: 2433773}
[2025-06-06 11:07:26] 2025-06-06 15:07:10,207 | INFO     | --------------------------------------------------
[2025-06-06 11:07:26] 2025-06-06 15:07:10,207 | INFO     | 
[2025-06-06 11:07:26] 2025-06-06 15:07:10,207 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 11:07:26] 2025-06-06 15:07:10,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | job 6669443590 has completed (purged errors)
[2025-06-06 11:07:26] 2025-06-06 15:07:10,255 | INFO     | overall cleanup function is called
[2025-06-06 11:07:26] 2025-06-06 15:07:11,266 | INFO     | --- collectZombieJob: --- 10, [856274]
[2025-06-06 11:07:26] 2025-06-06 15:07:11,266 | INFO     | zombie collector waiting for pid 856274
[2025-06-06 11:07:26] 2025-06-06 15:07:11,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:07:26] 2025-06-06 15:07:11,270 | INFO     | collected zombie processes
[2025-06-06 11:07:26] 2025-06-06 15:07:11,271 | INFO     | will attempt to kill all subprocesses of pid=856274
[2025-06-06 11:07:26] 2025-06-06 15:07:11,617 | INFO     | process IDs to be killed: [856274] (in reverse order)
[2025-06-06 11:07:26] 2025-06-06 15:07:11,746 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:07:26] 2025-06-06 15:07:11,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:07:26] 2025-06-06 15:07:11,762 | INFO     | did not find any defunct processes belonging to 856274
[2025-06-06 11:07:26] 2025-06-06 15:07:11,776 | INFO     | did not find any defunct processes belonging to 856274
[2025-06-06 11:07:26] 2025-06-06 15:07:11,776 | INFO     | ready for new job
[2025-06-06 11:07:26] 2025-06-06 15:07:11,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:07:26] 2025-06-06 15:07:11,779 | INFO     | **************************************
[2025-06-06 11:07:26] 2025-06-06 15:07:11,779 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:07:26] 2025-06-06 15:07:11,779 | INFO     | **************************************
[2025-06-06 11:07:26] 2025-06-06 15:07:11,779 | INFO     | 
[2025-06-06 11:07:26] 2025-06-06 15:07:11,782 | INFO     | architecture information:
[2025-06-06 11:07:26] 2025-06-06 15:07:11,783 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:07:26] 2025-06-06 15:07:11,809 | INFO     | cat /etc/os-release:
[2025-06-06 11:07:26] NAME="CentOS Linux"
[2025-06-06 11:07:26] VERSION="7 (Core)"
[2025-06-06 11:07:26] ID="centos"
[2025-06-06 11:07:26] ID_LIKE="rhel fedora"
[2025-06-06 11:07:26] VERSION_ID="7"
[2025-06-06 11:07:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:07:26] ANSI_COLOR="0;31"
[2025-06-06 11:07:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:07:26] HOME_URL="https://www.centos.org/"
[2025-06-06 11:07:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:07:26] 
[2025-06-06 11:07:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:07:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:07:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:07:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:07:26] 
[2025-06-06 11:07:26] 2025-06-06 15:07:11,809 | INFO     | **************************************
[2025-06-06 11:07:26] 2025-06-06 15:07:12,314 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 11:07:26] 2025-06-06 15:07:12,346 | INFO     | sufficient remaining disk space (76475793408 B)
[2025-06-06 11:07:26] 2025-06-06 15:07:12,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:07:26] 2025-06-06 15:07:12,346 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:07:26] 2025-06-06 15:07:12,347 | INFO     | update_server=False
[2025-06-06 11:07:26] 2025-06-06 15:07:12,347 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:07:26] 2025-06-06 15:07:12,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:07:26] 2025-06-06 15:07:12,347 | INFO     | aborting loop
[2025-06-06 11:07:26] 2025-06-06 15:07:12,545 | INFO     | all job control threads have been joined
[2025-06-06 11:07:26] 2025-06-06 15:07:12,960 | INFO     | all data control threads have been joined
[2025-06-06 11:07:26] 2025-06-06 15:07:13,169 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:07:26] 2025-06-06 15:07:13,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:07:26] 2025-06-06 15:07:13,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:07:26] 2025-06-06 15:07:13,351 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:13,352 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:13,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:07:26] 2025-06-06 15:07:13,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:13,513 | INFO     | all payload control threads have been joined
[2025-06-06 11:07:26] 2025-06-06 15:07:13,550 | INFO     | [job] control thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:13,744 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:13,879 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:13,966 | INFO     | [data] control thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:13,981 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:13,985 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:14,199 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:14,479 | INFO     | [job] validate thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:14,522 | INFO     | [payload] control thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:14,855 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:15,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:07:26] 2025-06-06 15:07:15,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:07:26] 2025-06-06 15:07:15,389 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:16,227 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:19,314 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:07:26] 2025-06-06 15:07:21,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716228118336)>', '<ExcThread(monitor, started 140715115923200)>']
[2025-06-06 11:07:26] 2025-06-06 15:07:22,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:07:26] 2025-06-06 15:07:22,221 | INFO     | [monitor] control thread has ended
[2025-06-06 11:07:26] 2025-06-06 15:07:26,440 | INFO     | all workflow threads have been joined
[2025-06-06 11:07:26] 2025-06-06 15:07:26,440 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:07:26] 2025-06-06 15:07:26,441 | INFO     | traces error code: 0
[2025-06-06 11:07:26] 2025-06-06 15:07:26,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:07:26] 2025-06-06 15:07:26,603 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:07:26] 2025-06-06 15:07:26,607 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:07:26] 2025-06-06 15:07:26,611 [wrapper] pilotpid: 839357
[2025-06-06 11:07:26] 2025-06-06 15:07:26,617 [wrapper] Pilot exit status: 0
[2025-06-06 11:07:26] 2025-06-06 15:07:26,636 [wrapper] pandaids: 6669443590
[2025-06-06 11:07:26] 2025-06-06 15:07:26,709 [wrapper] cleanup supervisor_pilot 1302958 839359
[2025-06-06 11:07:26] 2025-06-06 15:07:26,713 [wrapper] Test setup, not cleaning
[2025-06-06 11:07:26] 2025-06-06 15:07:26,717 [wrapper] apfmon messages muted
[2025-06-06 11:07:26] 2025-06-06 15:07:26,720 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:07:26] 2025-06-06 15:07:26,725 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:07:26]  *** Error codes and diagnostics ***
[2025-06-06 11:07:26]     "exeErrorCode": 0,
[2025-06-06 11:07:26]     "exeErrorDiag": "",
[2025-06-06 11:07:26]     "pilotErrorCode": 0,
[2025-06-06 11:07:26]     "pilotErrorDiag": "",
[2025-06-06 11:07:26]  *** Listing of results directory ***
[2025-06-06 11:07:26] total 417336
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas    495897 May 29 02:50 pilot3.tar.gz
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas      5111 May 29 02:54 queuedata.json
[2025-06-06 11:07:26] -rwx------. 1 boincer umatlas     37140 May 29 02:55 runpilot2-wrapper.sh
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas       100 Jun  6 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:07:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 09:20 run_atlas
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas       105 Jun  6 09:20 job.xml
[2025-06-06 11:07:26] -rw-r--r--. 2 boincer umatlas 225028758 Jun  6 09:20 EVNT.44871834._003802.pool.root.1
[2025-06-06 11:07:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 09:20 start_atlas.sh
[2025-06-06 11:07:26] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 09:20 shared
[2025-06-06 11:07:26] -rw-r--r--. 2 boincer umatlas    508881 Jun  6 09:20 input.tar.gz
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas         0 Jun  6 09:20 boinc_lockfile
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas      2558 Jun  6 09:20 pandaJob.out
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas    985728 Jun  6 09:20 agis_schedconf.cvmfs.json
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas   1598969 Jun  6 09:20 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:07:26] drwx------. 4 boincer umatlas      4096 Jun  6 09:20 pilot3
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas      6840 Jun  6 11:03 init_data.xml
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas 196558972 Jun  6 11:06 HITS.44871837._096468.pool.root.1
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas       529 Jun  6 11:06 boinc_task_state.xml
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas        95 Jun  6 11:06 pilot_heartbeat.json
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas      1040 Jun  6 11:06 memory_monitor_summary.json
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas    376030 Jun  6 11:06 log.44871837._096468.job.log.tgz.1
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas      7723 Jun  6 11:07 heartbeat.json
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas        27 Jun  6 11:07 wrapper_checkpoint.txt
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 11:07 boinc_mmap_file
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas      4353 Jun  6 11:07 pilotlog.txt
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas    590989 Jun  6 11:07 log.44871837._096468.job.log.1
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas       357 Jun  6 11:07 output.list
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas       620 Jun  6 11:07 runtime_log
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas    983040 Jun  6 11:07 result.tar.gz
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas      8666 Jun  6 11:07 runtime_log.err
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas       654 Jun  6 11:07 e3PNDmrLme7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX1dKDmRzq12m.diag
[2025-06-06 11:07:26] -rw-r--r--. 1 boincer umatlas     21169 Jun  6 11:07 stderr.txt
[2025-06-06 11:07:26] HITS file was successfully produced:
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas 196558972 Jun  6 11:06 shared/HITS.pool.root.1
[2025-06-06 11:07:26]  *** Contents of shared directory: ***
[2025-06-06 11:07:26] total 413196
[2025-06-06 11:07:26] -rw-r--r--. 2 boincer umatlas 225028758 Jun  6 09:20 ATLAS.root_0
[2025-06-06 11:07:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 09:20 start_atlas.sh
[2025-06-06 11:07:26] -rw-r--r--. 2 boincer umatlas    508881 Jun  6 09:20 input.tar.gz
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas 196558972 Jun  6 11:06 HITS.pool.root.1
[2025-06-06 11:07:26] -rw-------. 1 boincer umatlas    983040 Jun  6 11:07 result.tar.gz
11:07:28 (833654): run_atlas exited; CPU time 48640.088677
11:07:28 (833654): called boinc_finish(0)

</stderr_txt>
]]>

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