Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:09 (1091229): wrapper (7.7.26015): starting
08:30:09 (1091229): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 08:30:09] Arguments: --nthreads 12
[2025-06-06 08:30:09] Threads: 12
[2025-06-06 08:30:09] Checking for CVMFS
[2025-06-06 08:30:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 08:30:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 08:30:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 08:30:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 08:30:09] 2.12.6.0 4996 3632 119308 146857 0 337 32335633 32935937 11429 16776704 0 6421575 99.796 4312840 32944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 08:30:09] CVMFS is ok
[2025-06-06 08:30:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 08:30:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 08:30:09] Further information can be found at the LHC@home message board.
[2025-06-06 08:30:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 08:30:09] Checking for apptainer binary...
[2025-06-06 08:30:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 08:30:09] Running /usr/bin/apptainer --version
[2025-06-06 08:30:10] apptainer version 1.4.1-1.el9
[2025-06-06 08:30:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 08:30:10] c6-5-7-3.aglt2.org
[2025-06-06 08:30:10] apptainer works
[2025-06-06 08:30:10] Set ATHENA_PROC_NUMBER=12
[2025-06-06 08:30:10] Set ATHENA_CORE_NUMBER=12
[2025-06-06 08:30:10] Starting ATLAS job with PandaID=6669238528
[2025-06-06 08:30:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:31:21]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:31:21] 2025-06-06 15:31:07,971 | INFO     | extracted standard info from prmon json
[2025-06-06 11:31:21] 2025-06-06 15:31:07,971 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:31:21] 2025-06-06 15:31:07,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:31:21] 2025-06-06 15:31:07,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:31:21] 2025-06-06 15:31:07,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:31:21] 2025-06-06 15:31:07,975 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:31:21] 2025-06-06 15:31:07,975 | INFO     | sum of square deviations: 1719343481.932199
[2025-06-06 11:31:21] 2025-06-06 15:31:07,976 | INFO     | sum of deviations: 30028732692.542374
[2025-06-06 11:31:21] 2025-06-06 15:31:07,976 | INFO     | mean x: 1749218438.542373
[2025-06-06 11:31:21] 2025-06-06 15:31:07,976 | INFO     | mean y: 2318665.661016949
[2025-06-06 11:31:21] 2025-06-06 15:31:07,976 | INFO     | -- intersect: -30548187073.207184
[2025-06-06 11:31:21] 2025-06-06 15:31:07,977 | INFO     | intersect: -30548187073.207184
[2025-06-06 11:31:21] 2025-06-06 15:31:07,977 | INFO     | chi2: 1.7995907793044645
[2025-06-06 11:31:21] 2025-06-06 15:31:07,977 | INFO     | sum of square deviations: 1577722220.5290756
[2025-06-06 11:31:21] 2025-06-06 15:31:07,978 | INFO     | sum of deviations: 31596141771.79652
[2025-06-06 11:31:21] 2025-06-06 15:31:07,978 | INFO     | mean x: 1749218286.0523255
[2025-06-06 11:31:21] 2025-06-06 15:31:07,978 | INFO     | mean y: 2320298.13372093
[2025-06-06 11:31:21] 2025-06-06 15:31:07,978 | INFO     | -- intersect: -35028275225.4524
[2025-06-06 11:31:21] 2025-06-06 15:31:07,979 | INFO     | intersect: -35028275225.4524
[2025-06-06 11:31:21] 2025-06-06 15:31:07,979 | INFO     | chi2: 1.7703260743051248
[2025-06-06 11:31:21] 2025-06-06 15:31:07,979 | INFO     | current chi2=1.7703260743051248 (change=1.6261866495365385 %)
[2025-06-06 11:31:21] 2025-06-06 15:31:07,979 | INFO     | right removable region: 171
[2025-06-06 11:31:21] 2025-06-06 15:31:07,979 | INFO     | sum of square deviations: 1577674335.418603
[2025-06-06 11:31:21] 2025-06-06 15:31:07,980 | INFO     | sum of deviations: 547114592.3488374
[2025-06-06 11:31:21] 2025-06-06 15:31:07,980 | INFO     | mean x: 1749218591.0581396
[2025-06-06 11:31:21] 2025-06-06 15:31:07,980 | INFO     | mean y: 2350138.965116279
[2025-06-06 11:31:21] 2025-06-06 15:31:07,980 | INFO     | -- intersect: -604253514.8376539
[2025-06-06 11:31:21] 2025-06-06 15:31:07,980 | INFO     | intersect: -604253514.8376539
[2025-06-06 11:31:21] 2025-06-06 15:31:07,981 | INFO     | chi2: 0.2330040544357659
[2025-06-06 11:31:21] 2025-06-06 15:31:07,981 | INFO     | current chi2=0.2330040544357659 (change=87.0523867361767 %)
[2025-06-06 11:31:21] 2025-06-06 15:31:07,981 | INFO     | sum of square deviations: 1444015586.9580853
[2025-06-06 11:31:21] 2025-06-06 15:31:07,982 | INFO     | sum of deviations: -4971060452.706587
[2025-06-06 11:31:21] 2025-06-06 15:31:07,982 | INFO     | mean x: 1749218743.5688622
[2025-06-06 11:31:21] 2025-06-06 15:31:07,982 | INFO     | mean y: 2356320.017964072
[2025-06-06 11:31:21] 2025-06-06 15:31:07,982 | INFO     | -- intersect: 6024086416.163162
[2025-06-06 11:31:21] 2025-06-06 15:31:07,982 | INFO     | intersect: 6024086416.163162
[2025-06-06 11:31:21] 2025-06-06 15:31:07,982 | INFO     | chi2: 0.12287664419818141
[2025-06-06 11:31:21] 2025-06-06 15:31:07,982 | INFO     | current chi2=0.12287664419818141 (change=47.264160490367864 %)
[2025-06-06 11:31:21] 2025-06-06 15:31:07,983 | INFO     | sum of square deviations: 1318145288.2530828
[2025-06-06 11:31:21] 2025-06-06 15:31:07,983 | INFO     | sum of deviations: -4830983210.765431
[2025-06-06 11:31:21] 2025-06-06 15:31:07,983 | INFO     | mean x: 1749218896.0679011
[2025-06-06 11:31:21] 2025-06-06 15:31:07,984 | INFO     | mean y: 2356148.160493827
[2025-06-06 11:31:21] 2025-06-06 15:31:07,984 | INFO     | -- intersect: 6413217829.46796
[2025-06-06 11:31:21] 2025-06-06 15:31:07,984 | INFO     | intersect: 6413217829.46796
[2025-06-06 11:31:21] 2025-06-06 15:31:07,984 | INFO     | chi2: 0.11863057557994755
[2025-06-06 11:31:21] 2025-06-06 15:31:07,984 | INFO     | current chi2=0.11863057557994755 (change=3.4555538572371765 %)
[2025-06-06 11:31:21] 2025-06-06 15:31:07,984 | INFO     | left removable region: 30
[2025-06-06 11:31:21] 2025-06-06 15:31:07,984 | INFO     | sum of square deviations: 869092044.4680843
[2025-06-06 11:31:21] 2025-06-06 15:31:07,985 | INFO     | sum of deviations: 2698235571.042553
[2025-06-06 11:31:21] 2025-06-06 15:31:07,985 | INFO     | mean x: 1749219170.5744681
[2025-06-06 11:31:21] 2025-06-06 15:31:07,985 | INFO     | mean y: 2351299.9007092197
[2025-06-06 11:31:21] 2025-06-06 15:31:07,985 | INFO     | -- intersect: -5428380022.0989895
[2025-06-06 11:31:21] 2025-06-06 15:31:07,985 | INFO     | intersect: -5428380022.0989895
[2025-06-06 11:31:21] 2025-06-06 15:31:07,985 | INFO     | chi2: 0.06914990906989076
[2025-06-06 11:31:21] 2025-06-06 15:31:07,985 | INFO     | -- intersect: -5428380022.0989895
[2025-06-06 11:31:21] 2025-06-06 15:31:07,986 | INFO     | current memory leak: 3.10 B/s (using 141 data points, chi2=0.07)
[2025-06-06 11:31:21] 2025-06-06 15:31:07,986 | INFO     | ..............................
[2025-06-06 11:31:21] 2025-06-06 15:31:07,986 | INFO     | . Timing measurements:
[2025-06-06 11:31:21] 2025-06-06 15:31:07,986 | INFO     | . get job = 0 s
[2025-06-06 11:31:21] 2025-06-06 15:31:07,986 | INFO     | . initial setup = 3 s
[2025-06-06 11:31:21] 2025-06-06 15:31:07,986 | INFO     | . payload setup = 11 s
[2025-06-06 11:31:21] 2025-06-06 15:31:07,986 | INFO     | . stage-in = 0 s
[2025-06-06 11:31:21] 2025-06-06 15:31:07,986 | INFO     | . payload execution = 10789 s
[2025-06-06 11:31:21] 2025-06-06 15:31:07,987 | INFO     | . stage-out = 3 s
[2025-06-06 11:31:21] 2025-06-06 15:31:07,987 | INFO     | . log creation = 0 s
[2025-06-06 11:31:21] 2025-06-06 15:31:07,987 | INFO     | ..............................
[2025-06-06 11:31:21] 2025-06-06 15:31:08,157 | INFO     | 
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | job summary report
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | --------------------------------------------------
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | PanDA job id: 6669238528
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | task id: 44871837
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | errors: (none)
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | pilot state: finished 
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | transexitcode: 0
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | exeerrorcode: 0
[2025-06-06 11:31:21] 2025-06-06 15:31:08,158 | INFO     | exeerrordiag: 
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | exitcode: 0
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | exitmsg: OK
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | cpuconsumptiontime: 53091 s
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | nevents: 400
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | neventsw: 0
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | pid: 1104220
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | pgrp: 1104220
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | corecount: 12
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | event service: False
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | sizes: {0: 2397221, 1: 2397420, 10: 2397626, 11: 2397654, 10805: 2426546, 10806: 2426545, 10809: 2435670, 10811: 2435726, 10819: 2435896}
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | --------------------------------------------------
[2025-06-06 11:31:21] 2025-06-06 15:31:08,159 | INFO     | 
[2025-06-06 11:31:21] 2025-06-06 15:31:08,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 11:31:21] 2025-06-06 15:31:08,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,223 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:31:21] 2025-06-06 15:31:08,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:31:21] 2025-06-06 15:31:08,225 | INFO     | job 6669238528 has completed (purged errors)
[2025-06-06 11:31:21] 2025-06-06 15:31:08,225 | INFO     | overall cleanup function is called
[2025-06-06 11:31:21] 2025-06-06 15:31:09,242 | INFO     | --- collectZombieJob: --- 10, [1104220]
[2025-06-06 11:31:21] 2025-06-06 15:31:09,243 | INFO     | zombie collector waiting for pid 1104220
[2025-06-06 11:31:21] 2025-06-06 15:31:09,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:31:21] 2025-06-06 15:31:09,243 | INFO     | collected zombie processes
[2025-06-06 11:31:21] 2025-06-06 15:31:09,243 | INFO     | will attempt to kill all subprocesses of pid=1104220
[2025-06-06 11:31:21] 2025-06-06 15:31:09,663 | INFO     | process IDs to be killed: [1104220] (in reverse order)
[2025-06-06 11:31:21] 2025-06-06 15:31:09,766 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:31:21] 2025-06-06 15:31:09,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:31:21] 2025-06-06 15:31:09,784 | INFO     | did not find any defunct processes belonging to 1104220
[2025-06-06 11:31:21] 2025-06-06 15:31:09,797 | INFO     | did not find any defunct processes belonging to 1104220
[2025-06-06 11:31:21] 2025-06-06 15:31:09,798 | INFO     | ready for new job
[2025-06-06 11:31:21] 2025-06-06 15:31:09,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:31:21] 2025-06-06 15:31:09,800 | INFO     | **************************************
[2025-06-06 11:31:21] 2025-06-06 15:31:09,800 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:31:21] 2025-06-06 15:31:09,800 | INFO     | **************************************
[2025-06-06 11:31:21] 2025-06-06 15:31:09,800 | INFO     | 
[2025-06-06 11:31:21] 2025-06-06 15:31:09,817 | INFO     | architecture information:
[2025-06-06 11:31:21] 2025-06-06 15:31:09,820 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:31:21] 2025-06-06 15:31:09,858 | INFO     | cat /etc/os-release:
[2025-06-06 11:31:21] NAME="CentOS Linux"
[2025-06-06 11:31:21] VERSION="7 (Core)"
[2025-06-06 11:31:21] ID="centos"
[2025-06-06 11:31:21] ID_LIKE="rhel fedora"
[2025-06-06 11:31:21] VERSION_ID="7"
[2025-06-06 11:31:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:31:21] ANSI_COLOR="0;31"
[2025-06-06 11:31:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:31:21] HOME_URL="https://www.centos.org/"
[2025-06-06 11:31:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:31:21] 
[2025-06-06 11:31:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:31:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:31:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:31:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:31:21] 
[2025-06-06 11:31:21] 2025-06-06 15:31:09,859 | INFO     | **************************************
[2025-06-06 11:31:21] 2025-06-06 15:31:10,362 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 11:31:21] 2025-06-06 15:31:10,424 | INFO     | sufficient remaining disk space (76539756544 B)
[2025-06-06 11:31:21] 2025-06-06 15:31:10,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:31:21] 2025-06-06 15:31:10,424 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:31:21] 2025-06-06 15:31:10,425 | INFO     | update_server=False
[2025-06-06 11:31:21] 2025-06-06 15:31:10,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:31:21] 2025-06-06 15:31:10,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:31:21] 2025-06-06 15:31:10,742 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 11:31:21] 2025-06-06 15:31:10,743 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 11:31:21] 2025-06-06 15:31:10,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:31:21] 2025-06-06 15:31:10,743 | INFO     | will abort loop
[2025-06-06 11:31:21] 2025-06-06 15:31:11,092 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:31:21] 2025-06-06 15:31:11,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:31:21] 2025-06-06 15:31:11,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:31:21] 2025-06-06 15:31:11,297 | INFO     | all payload control threads have been joined
[2025-06-06 11:31:21] 2025-06-06 15:31:11,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:31:21] 2025-06-06 15:31:11,431 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:11,462 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:11,532 | INFO     | all data control threads have been joined
[2025-06-06 11:31:21] 2025-06-06 15:31:11,749 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:11,827 | INFO     | all job control threads have been joined
[2025-06-06 11:31:21] 2025-06-06 15:31:12,115 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,208 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,303 | INFO     | [payload] control thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,440 | INFO     | [job] validate thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,538 | INFO     | [data] control thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,780 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,833 | INFO     | [job] control thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,882 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:12,886 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:13,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:31:21] 2025-06-06 15:31:13,341 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:14,099 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:14,509 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:31:21] 2025-06-06 15:31:15,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437128140608)>', '<ExcThread(monitor, started 140435901118208)>']
[2025-06-06 11:31:21] 2025-06-06 15:31:16,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:31:21] 2025-06-06 15:31:16,122 | INFO     | [monitor] control thread has ended
[2025-06-06 11:31:21] 2025-06-06 15:31:20,785 | INFO     | all workflow threads have been joined
[2025-06-06 11:31:21] 2025-06-06 15:31:20,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:31:21] 2025-06-06 15:31:20,786 | INFO     | traces error code: 0
[2025-06-06 11:31:21] 2025-06-06 15:31:20,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:31:21] 2025-06-06 15:31:21,161 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:31:21] 2025-06-06 15:31:21,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:31:21] 2025-06-06 15:31:21,223 [wrapper] pilotpid: 1094933
[2025-06-06 11:31:21] 2025-06-06 15:31:21,262 [wrapper] Pilot exit status: 0
[2025-06-06 11:31:21] 2025-06-06 15:31:21,444 [wrapper] pandaids: 6669238528
[2025-06-06 11:31:21] 2025-06-06 15:31:21,517 [wrapper] cleanup supervisor_pilot 1399983 1094934
[2025-06-06 11:31:21] 2025-06-06 15:31:21,521 [wrapper] Test setup, not cleaning
[2025-06-06 11:31:21] 2025-06-06 15:31:21,524 [wrapper] apfmon messages muted
[2025-06-06 11:31:21] 2025-06-06 15:31:21,528 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:31:21] 2025-06-06 15:31:21,531 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:31:21]  *** Error codes and diagnostics ***
[2025-06-06 11:31:21]     "exeErrorCode": 0,
[2025-06-06 11:31:21]     "exeErrorDiag": "",
[2025-06-06 11:31:21]     "pilotErrorCode": 0,
[2025-06-06 11:31:21]     "pilotErrorDiag": "",
[2025-06-06 11:31:21]  *** Listing of results directory ***
[2025-06-06 11:31:21] total 424896
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas    495897 May 29 00:11 pilot3.tar.gz
[2025-06-06 11:31:21] -rwx------. 1 boincer umatlas     37140 May 29 00:54 runpilot2-wrapper.sh
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas      5111 May 29 00:54 queuedata.json
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas       100 Jun  6 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:31:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 08:30 run_atlas
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas       105 Jun  6 08:30 job.xml
[2025-06-06 11:31:21] -rw-r--r--. 2 boincer umatlas 222818451 Jun  6 08:30 EVNT.44871834._003742.pool.root.1
[2025-06-06 11:31:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 08:30 start_atlas.sh
[2025-06-06 11:31:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 08:30 shared
[2025-06-06 11:31:21] -rw-r--r--. 2 boincer umatlas    508875 Jun  6 08:30 input.tar.gz
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas         0 Jun  6 08:30 boinc_lockfile
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 08:30 pandaJob.out
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas    985741 Jun  6 08:30 agis_schedconf.cvmfs.json
[2025-06-06 11:31:21] drwx------. 4 boincer umatlas      4096 Jun  6 08:30 pilot3
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas      6841 Jun  6 11:29 init_data.xml
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas 205697211 Jun  6 11:30 HITS.44871837._095290.pool.root.1
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas       531 Jun  6 11:30 boinc_task_state.xml
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas        95 Jun  6 11:30 pilot_heartbeat.json
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas      1039 Jun  6 11:30 memory_monitor_summary.json
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas   1598969 Jun  6 11:30 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas    425953 Jun  6 11:30 log.44871837._095290.job.log.tgz.1
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas      7721 Jun  6 11:31 heartbeat.json
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 11:31 boinc_mmap_file
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas        28 Jun  6 11:31 wrapper_checkpoint.txt
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas      4539 Jun  6 11:31 pilotlog.txt
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas    946876 Jun  6 11:31 log.44871837._095290.job.log.1
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas       357 Jun  6 11:31 output.list
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas       620 Jun  6 11:31 runtime_log
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas   1392640 Jun  6 11:31 result.tar.gz
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas       655 Jun  6 11:31 sh7LDmTSke7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJgUKDmNjrlUn.diag
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas      8662 Jun  6 11:31 runtime_log.err
[2025-06-06 11:31:21] -rw-r--r--. 1 boincer umatlas     20892 Jun  6 11:31 stderr.txt
[2025-06-06 11:31:21] HITS file was successfully produced:
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas 205697211 Jun  6 11:30 shared/HITS.pool.root.1
[2025-06-06 11:31:21]  *** Contents of shared directory: ***
[2025-06-06 11:31:21] total 420360
[2025-06-06 11:31:21] -rw-r--r--. 2 boincer umatlas 222818451 Jun  6 08:30 ATLAS.root_0
[2025-06-06 11:31:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 08:30 start_atlas.sh
[2025-06-06 11:31:21] -rw-r--r--. 2 boincer umatlas    508875 Jun  6 08:30 input.tar.gz
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas 205697211 Jun  6 11:30 HITS.pool.root.1
[2025-06-06 11:31:21] -rw-------. 1 boincer umatlas   1392640 Jun  6 11:31 result.tar.gz
11:31:44 (1091229): run_atlas exited; CPU time 53235.551575
11:31:44 (1091229): called boinc_finish(0)

</stderr_txt>
]]>

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