Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:10:32 (898352): wrapper (7.7.26015): starting
07:10:32 (898352): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 07:10:32] Arguments: --nthreads 12
[2025-06-06 07:10:32] Threads: 12
[2025-06-06 07:10:32] Checking for CVMFS
[2025-06-06 07:10:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:10:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:10:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:10:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:10:32] 2.12.6.0 4996 3553 107268 146854 0 14 32312866 32935937 10486 16776704 0 6185645 99.789 4309267 32956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 07:10:32] CVMFS is ok
[2025-06-06 07:10:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 07:10:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 07:10:32] Further information can be found at the LHC@home message board.
[2025-06-06 07:10:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:10:32] Checking for apptainer binary...
[2025-06-06 07:10:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 07:10:32] Running /usr/bin/apptainer --version
[2025-06-06 07:10:32] apptainer version 1.4.1-1.el9
[2025-06-06 07:10:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:10:33] c6-5-7-3.aglt2.org
[2025-06-06 07:10:33] apptainer works
[2025-06-06 07:10:33] Set ATHENA_PROC_NUMBER=12
[2025-06-06 07:10:33] Set ATHENA_CORE_NUMBER=12
[2025-06-06 07:10:33] Starting ATLAS job with PandaID=6677617320
[2025-06-06 07:10:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:30:04]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:30:04]  status=None
[2025-06-06 08:30:04]  status_code=0
[2025-06-06 08:30:04]  storage_token=
[2025-06-06 08:30:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677617320/log.45006595._031947.job.log.tgz.1
[2025-06-06 08:30:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/bb/log.45006595._031947.job.log.tgz.1
[2025-06-06 08:30:04]  workdir=None
[2025-06-06 08:30:04] ]
[2025-06-06 08:30:04] 2025-06-06 12:29:35,669 | INFO     | transferring file log.45006595._031947.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677617320/log.45006595._031947.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 08:30:04] 2025-06-06 12:29:35,669 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677617320/log.45006595._031947.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._031947.job
[2025-06-06 08:30:04] 2025-06-06 12:29:35,725 | INFO     | adding to output.list: log.45006595._031947.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/bb/log.45006595._031947.job.log.tg
[2025-06-06 08:30:04] 2025-06-06 12:29:35,726 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 08:30:04] 2025-06-06 12:29:35,726 | INFO     | summary of transferred files:
[2025-06-06 08:30:04] 2025-06-06 12:29:35,726 | INFO     |  -- lfn=log.45006595._031947.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 08:30:04] 2025-06-06 12:29:35,727 | INFO     | stage-out finished correctly
[2025-06-06 08:30:04] 2025-06-06 12:29:38,113 | WARNING  | process 908946 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 08:30:04] 2025-06-06 12:29:38,113 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677617320/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:30:04] 2025-06-06 12:29:38,633 | INFO     | number of running child processes to parent process 908946: 1
[2025-06-06 08:30:04] 2025-06-06 12:29:38,633 | INFO     | maximum number of monitored processes: 6
[2025-06-06 08:30:04] 2025-06-06 12:29:39,282 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 08:30:04] 2025-06-06 12:29:41,138 | INFO     | monitor loop #329: job 0:6677617320 is in state 'finished'
[2025-06-06 08:30:04] 2025-06-06 12:29:41,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:30:04] 2025-06-06 12:29:41,793 | INFO     | job 6677617320 has state=finished
[2025-06-06 08:30:04] 2025-06-06 12:29:41,793 | INFO     | preparing for final server update for job 6677617320 in state='finished'
[2025-06-06 08:30:04] 2025-06-06 12:29:41,794 | INFO     | this job has now completed (state=finished)
[2025-06-06 08:30:04] 2025-06-06 12:29:41,794 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 08:30:04] 2025-06-06 12:29:41,794 | INFO     | log transfer has been attempted: DONE
[2025-06-06 08:30:04] 2025-06-06 12:29:41,794 | INFO     | job 6677617320 has finished - writing final server update
[2025-06-06 08:30:04] 2025-06-06 12:29:41,795 | INFO     | total number of processed events: 400 (read)
[2025-06-06 08:30:04] 2025-06-06 12:29:41,828 | INFO     | executing command: lscpu
[2025-06-06 08:30:04] 2025-06-06 12:29:42,074 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 08:30:04] 2025-06-06 12:29:43,644 | INFO     | monitor loop #330: job 0:6677617320 is in state 'finished'
[2025-06-06 08:30:04] 2025-06-06 12:29:43,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:30:04] 2025-06-06 12:29:46,149 | INFO     | monitor loop #331: job 0:6677617320 is in state 'finished'
[2025-06-06 08:30:04] 2025-06-06 12:29:46,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:30:04] 2025-06-06 12:29:48,668 | INFO     | monitor loop #332: job 0:6677617320 is in state 'finished'
[2025-06-06 08:30:04] 2025-06-06 12:29:48,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:30:04] 2025-06-06 12:29:49,366 | INFO     | PID=902364 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-06 08:30:04] 2025-06-06 12:29:49,366 | INFO     | .. there are 8 such processes running
[2025-06-06 08:30:04] 2025-06-06 12:29:51,173 | INFO     | monitor loop #333: job 0:6677617320 is in state 'finished'
[2025-06-06 08:30:04] 2025-06-06 12:29:51,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:30:04] 2025-06-06 12:29:51,631 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 08:30:04] 2025-06-06 12:29:51,633 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677617320/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:30:04] 2025-06-06 12:29:51,633 | INFO     | extracted standard info from prmon json
[2025-06-06 08:30:04] 2025-06-06 12:29:51,634 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:30:04] 2025-06-06 12:29:51,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:30:04] 2025-06-06 12:29:51,634 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:30:04] 2025-06-06 12:29:51,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:30:04] 2025-06-06 12:29:51,636 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:30:04] 2025-06-06 12:29:51,637 | INFO     | sum of square deviations: 110984144.39436613
[2025-06-06 08:30:04] 2025-06-06 12:29:51,637 | INFO     | sum of deviations: -10656164294.352112
[2025-06-06 08:30:04] 2025-06-06 12:29:51,637 | INFO     | mean x: 1749210711.225352
[2025-06-06 08:30:04] 2025-06-06 12:29:51,637 | INFO     | mean y: 2471962.084507042
[2025-06-06 08:30:04] 2025-06-06 12:29:51,637 | INFO     | -- intersect: 167953279944.38284
[2025-06-06 08:30:04] 2025-06-06 12:29:51,638 | INFO     | intersect: 167953279944.38284
[2025-06-06 08:30:04] 2025-06-06 12:29:51,638 | INFO     | chi2: 0.14520002785173922
[2025-06-06 08:30:04] 2025-06-06 12:29:51,638 | INFO     | -- intersect: 167953279944.38284
[2025-06-06 08:30:04] 2025-06-06 12:29:51,638 | INFO     | current memory leak: -96.02 B/s (using 71 data points, chi2=0.15)
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | ..............................
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | . Timing measurements:
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | . get job = 0 s
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | . initial setup = 2 s
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | . payload setup = 7 s
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | . stage-in = 0 s
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | . payload execution = 4704 s
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | . stage-out = 1 s
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | . log creation = 0 s
[2025-06-06 08:30:04] 2025-06-06 12:29:51,639 | INFO     | ..............................
[2025-06-06 08:30:04] 2025-06-06 12:29:51,766 | INFO     | 
[2025-06-06 08:30:04] 2025-06-06 12:29:51,767 | INFO     | job summary report
[2025-06-06 08:30:04] 2025-06-06 12:29:51,767 | INFO     | --------------------------------------------------
[2025-06-06 08:30:04] 2025-06-06 12:29:51,768 | INFO     | PanDA job id: 6677617320
[2025-06-06 08:30:04] 2025-06-06 12:29:51,768 | INFO     | task id: 45006595
[2025-06-06 08:30:04] 2025-06-06 12:29:51,768 | INFO     | errors: (none)
[2025-06-06 08:30:04] 2025-06-06 12:29:51,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | pilot state: finished 
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | transexitcode: 0
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | exeerrorcode: 0
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | exeerrordiag: 
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | exitcode: 0
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | exitmsg: OK
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | cpuconsumptiontime: 35566 s
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | nevents: 400
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | neventsw: 0
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | pid: 908946
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | pgrp: 908946
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | corecount: 12
[2025-06-06 08:30:04] 2025-06-06 12:29:51,769 | INFO     | event service: False
[2025-06-06 08:30:04] 2025-06-06 12:29:51,770 | INFO     | sizes: {0: 2397228, 1: 2397370, 5: 2397576, 11: 2397632, 4715: 2423630, 4717: 2432571, 4721: 2432755, 4733: 2432925}
[2025-06-06 08:30:04] 2025-06-06 12:29:51,770 | INFO     | --------------------------------------------------
[2025-06-06 08:30:04] 2025-06-06 12:29:51,770 | INFO     | 
[2025-06-06 08:30:04] 2025-06-06 12:29:51,770 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 08:30:04] 2025-06-06 12:29:51,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,795 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,795 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,795 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:30:04] 2025-06-06 12:29:51,796 | INFO     | job 6677617320 has completed (purged errors)
[2025-06-06 08:30:04] 2025-06-06 12:29:51,797 | INFO     | overall cleanup function is called
[2025-06-06 08:30:04] 2025-06-06 12:29:52,806 | INFO     | --- collectZombieJob: --- 10, [908946]
[2025-06-06 08:30:04] 2025-06-06 12:29:52,807 | INFO     | zombie collector waiting for pid 908946
[2025-06-06 08:30:04] 2025-06-06 12:29:52,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:30:04] 2025-06-06 12:29:52,808 | INFO     | collected zombie processes
[2025-06-06 08:30:04] 2025-06-06 12:29:52,808 | INFO     | will attempt to kill all subprocesses of pid=908946
[2025-06-06 08:30:04] 2025-06-06 12:29:53,462 | INFO     | process IDs to be killed: [908946] (in reverse order)
[2025-06-06 08:30:04] 2025-06-06 12:29:53,623 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:30:04] 2025-06-06 12:29:53,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:30:04] 2025-06-06 12:29:53,639 | INFO     | did not find any defunct processes belonging to 908946
[2025-06-06 08:30:04] 2025-06-06 12:29:53,649 | INFO     | did not find any defunct processes belonging to 908946
[2025-06-06 08:30:04] 2025-06-06 12:29:53,649 | INFO     | ready for new job
[2025-06-06 08:30:04] 2025-06-06 12:29:53,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:30:04] 2025-06-06 12:29:53,653 | INFO     | **************************************
[2025-06-06 08:30:04] 2025-06-06 12:29:53,653 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:30:04] 2025-06-06 12:29:53,653 | INFO     | **************************************
[2025-06-06 08:30:04] 2025-06-06 12:29:53,653 | INFO     | 
[2025-06-06 08:30:04] 2025-06-06 12:29:53,671 | INFO     | architecture information:
[2025-06-06 08:30:04] 2025-06-06 12:29:53,671 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:30:04] 2025-06-06 12:29:53,686 | INFO     | cat /etc/os-release:
[2025-06-06 08:30:04] NAME="CentOS Linux"
[2025-06-06 08:30:04] VERSION="7 (Core)"
[2025-06-06 08:30:04] ID="centos"
[2025-06-06 08:30:04] ID_LIKE="rhel fedora"
[2025-06-06 08:30:04] VERSION_ID="7"
[2025-06-06 08:30:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:30:04] ANSI_COLOR="0;31"
[2025-06-06 08:30:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:30:04] HOME_URL="https://www.centos.org/"
[2025-06-06 08:30:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:30:04] 
[2025-06-06 08:30:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:30:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:30:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:30:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:30:04] 
[2025-06-06 08:30:04] 2025-06-06 12:29:53,686 | INFO     | **************************************
[2025-06-06 08:30:04] 2025-06-06 12:29:54,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 08:30:04] 2025-06-06 12:29:54,239 | INFO     | sufficient remaining disk space (76356255744 B)
[2025-06-06 08:30:04] 2025-06-06 12:29:54,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:30:04] 2025-06-06 12:29:54,240 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:30:04] 2025-06-06 12:29:54,240 | INFO     | update_server=False
[2025-06-06 08:30:04] 2025-06-06 12:29:54,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:30:04] 2025-06-06 12:29:54,241 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 08:30:04] 2025-06-06 12:29:54,242 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:30:04] 2025-06-06 12:29:54,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:30:04] 2025-06-06 12:29:54,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:30:04] 2025-06-06 12:29:54,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:30:04] 2025-06-06 12:29:54,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:30:04] 2025-06-06 12:29:54,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:30:04] 2025-06-06 12:29:54,687 | INFO     | aborting loop
[2025-06-06 08:30:04] 2025-06-06 12:29:54,818 | INFO     | all job control threads have been joined
[2025-06-06 08:30:04] 2025-06-06 12:29:54,838 | INFO     | all payload control threads have been joined
[2025-06-06 08:30:04] 2025-06-06 12:29:55,092 | INFO     | all data control threads have been joined
[2025-06-06 08:30:04] 2025-06-06 12:29:55,246 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:55,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:55,693 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:55,811 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:55,816 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:55,825 | INFO     | [job] control thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:55,845 | INFO     | [payload] control thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:56,082 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:56,098 | INFO     | [data] control thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:56,194 | INFO     | [job] validate thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:56,207 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:56,255 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:56,389 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:56,398 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:56,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:30:04] 2025-06-06 12:29:57,786 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:58,546 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:30:04] 2025-06-06 12:29:58,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040199137088)>', '<ExcThread(monitor, started 140039270946560)>']
[2025-06-06 08:30:04] 2025-06-06 12:29:59,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:30:04] 2025-06-06 12:29:59,276 | INFO     | [monitor] control thread has ended
[2025-06-06 08:30:04] 2025-06-06 12:30:03,734 | INFO     | all workflow threads have been joined
[2025-06-06 08:30:04] 2025-06-06 12:30:03,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:30:04] 2025-06-06 12:30:03,735 | INFO     | traces error code: 0
[2025-06-06 08:30:04] 2025-06-06 12:30:03,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:30:04] 2025-06-06 12:30:04,107 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:30:04] 2025-06-06 12:30:04,110 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:30:04] 2025-06-06 12:30:04,113 [wrapper] pilotpid: 902364
[2025-06-06 08:30:04] 2025-06-06 12:30:04,116 [wrapper] Pilot exit status: 0
[2025-06-06 08:30:04] 2025-06-06 12:30:04,151 [wrapper] pandaids: 6677617320
[2025-06-06 08:30:04] 2025-06-06 12:30:04,206 [wrapper] cleanup supervisor_pilot 1070863 902365
[2025-06-06 08:30:04] 2025-06-06 12:30:04,220 [wrapper] Test setup, not cleaning
[2025-06-06 08:30:04] 2025-06-06 12:30:04,223 [wrapper] apfmon messages muted
[2025-06-06 08:30:04] 2025-06-06 12:30:04,226 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:30:04] 2025-06-06 12:30:04,228 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:30:04]  *** Error codes and diagnostics ***
[2025-06-06 08:30:04]     "exeErrorCode": 0,
[2025-06-06 08:30:04]     "exeErrorDiag": "",
[2025-06-06 08:30:04]     "pilotErrorCode": 0,
[2025-06-06 08:30:04]     "pilotErrorDiag": "",
[2025-06-06 08:30:04]  *** Listing of results directory ***
[2025-06-06 08:30:04] total 392632
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:17 queuedata.json
[2025-06-06 08:30:04] -rwx------. 1 boincer umatlas     37140 Jun  3 08:18 runpilot2-wrapper.sh
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas       100 Jun  6 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:30:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 07:10 run_atlas
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas       105 Jun  6 07:10 job.xml
[2025-06-06 08:30:04] -rw-r--r--. 2 boincer umatlas 216302807 Jun  6 07:10 EVNT.45006593._001286.pool.root.1
[2025-06-06 08:30:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 07:10 start_atlas.sh
[2025-06-06 08:30:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 07:10 shared
[2025-06-06 08:30:04] -rw-r--r--. 2 boincer umatlas    508886 Jun  6 07:10 input.tar.gz
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas         0 Jun  6 07:10 boinc_lockfile
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas      2525 Jun  6 07:10 pandaJob.out
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas    985732 Jun  6 07:10 agis_schedconf.cvmfs.json
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas   1598969 Jun  6 07:10 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:30:04] drwx------. 4 boincer umatlas      4096 Jun  6 07:10 pilot3
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas      6840 Jun  6 08:28 init_data.xml
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas 180298591 Jun  6 08:28 HITS.45006595._031947.pool.root.1
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas       529 Jun  6 08:28 boinc_task_state.xml
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas        95 Jun  6 08:29 pilot_heartbeat.json
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas      1041 Jun  6 08:29 memory_monitor_summary.json
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas    357456 Jun  6 08:29 log.45006595._031947.job.log.tgz.1
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas      7720 Jun  6 08:29 heartbeat.json
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas        27 Jun  6 08:29 wrapper_checkpoint.txt
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 08:29 boinc_mmap_file
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas      4476 Jun  6 08:30 pilotlog.txt
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas    449809 Jun  6 08:30 log.45006595._031947.job.log.1
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas       357 Jun  6 08:30 output.list
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas       620 Jun  6 08:30 runtime_log
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas    829440 Jun  6 08:30 result.tar.gz
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas       653 Jun  6 08:30 Z7GNDmQmfg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVZYKDmFRLrTo.diag
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas      8661 Jun  6 08:30 runtime_log.err
[2025-06-06 08:30:04] -rw-r--r--. 1 boincer umatlas     22122 Jun  6 08:30 stderr.txt
[2025-06-06 08:30:04] HITS file was successfully produced:
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas 180298591 Jun  6 08:28 shared/HITS.pool.root.1
[2025-06-06 08:30:04]  *** Contents of shared directory: ***
[2025-06-06 08:30:04] total 388648
[2025-06-06 08:30:04] -rw-r--r--. 2 boincer umatlas 216302807 Jun  6 07:10 ATLAS.root_0
[2025-06-06 08:30:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 07:10 start_atlas.sh
[2025-06-06 08:30:04] -rw-r--r--. 2 boincer umatlas    508886 Jun  6 07:10 input.tar.gz
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas 180298591 Jun  6 08:28 HITS.pool.root.1
[2025-06-06 08:30:04] -rw-------. 1 boincer umatlas    829440 Jun  6 08:30 result.tar.gz
08:30:05 (898352): run_atlas exited; CPU time 35611.104871
08:30:05 (898352): called boinc_finish(0)

</stderr_txt>
]]>

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