Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:55:46 (3963287): wrapper (7.7.26015): starting
06:55:46 (3963287): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 06:55:46] Arguments: --nthreads 12
[2025-06-06 06:55:46] Threads: 12
[2025-06-06 06:55:46] Checking for CVMFS
[2025-06-06 06:55:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 06:55:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 06:55:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 06:55:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 06:55:46] 2.12.6.0 5109 34291 464744 146852 0 138 32393760 32935936 10410 16776704 0 133530656 99.667 119587397 32557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 06:55:46] CVMFS is ok
[2025-06-06 06:55:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:55:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 06:55:46] Further information can be found at the LHC@home message board.
[2025-06-06 06:55:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:55:46] Checking for apptainer binary...
[2025-06-06 06:55:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 06:55:46] Running /usr/bin/apptainer --version
[2025-06-06 06:55:46] apptainer version 1.4.1-1.el9
[2025-06-06 06:55:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:55:46] c6-2-29-2.aglt2.org
[2025-06-06 06:55:46] apptainer works
[2025-06-06 06:55:46] Set ATHENA_PROC_NUMBER=12
[2025-06-06 06:55:46] Set ATHENA_CORE_NUMBER=12
[2025-06-06 06:55:46] Starting ATLAS job with PandaID=6669136061
[2025-06-06 06:55:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:15:13]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:15:13]  is_tar=False
[2025-06-06 08:15:13]  lfn=log.44871837._094262.job.log.tgz.1
[2025-06-06 08:15:13]  mtime=0
[2025-06-06 08:15:13]  protocol_id=None
[2025-06-06 08:15:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 08:15:13]  replicas=None
[2025-06-06 08:15:13]  scope=mc23_13p6TeV
[2025-06-06 08:15:13]  status=None
[2025-06-06 08:15:13]  status_code=0
[2025-06-06 08:15:13]  storage_token=
[2025-06-06 08:15:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669136061/log.44871837._094262.job.log.tgz.1
[2025-06-06 08:15:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/e3/log.44871837._094262.job.log.tgz.1
[2025-06-06 08:15:13]  workdir=None
[2025-06-06 08:15:13] ]
[2025-06-06 08:15:13] 2025-06-06 12:14:50,245 | INFO     | transferring file log.44871837._094262.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669136061/log.44871837._094262.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 08:15:13] 2025-06-06 12:14:50,245 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669136061/log.44871837._094262.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._094262.job
[2025-06-06 08:15:13] 2025-06-06 12:14:50,263 | INFO     | adding to output.list: log.44871837._094262.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/e3/log.44871837._094262.job.log.tg
[2025-06-06 08:15:13] 2025-06-06 12:14:50,264 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 08:15:13] 2025-06-06 12:14:50,264 | INFO     | summary of transferred files:
[2025-06-06 08:15:13] 2025-06-06 12:14:50,265 | INFO     |  -- lfn=log.44871837._094262.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 08:15:13] 2025-06-06 12:14:50,265 | INFO     | stage-out finished correctly
[2025-06-06 08:15:13] 2025-06-06 12:14:52,285 | WARNING  | process 3974849 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 08:15:13] 2025-06-06 12:14:52,285 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669136061/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:15:13] 2025-06-06 12:14:52,510 | INFO     | number of running child processes to parent process 3974849: 1
[2025-06-06 08:15:13] 2025-06-06 12:14:52,511 | INFO     | maximum number of monitored processes: 6
[2025-06-06 08:15:13] 2025-06-06 12:14:52,873 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 08:15:13] 2025-06-06 12:14:55,013 | INFO     | monitor loop #341: job 0:6669136061 is in state 'finished'
[2025-06-06 08:15:13] 2025-06-06 12:14:55,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:15:13] 2025-06-06 12:14:55,019 | INFO     | job 6669136061 has state=finished
[2025-06-06 08:15:13] 2025-06-06 12:14:55,020 | INFO     | preparing for final server update for job 6669136061 in state='finished'
[2025-06-06 08:15:13] 2025-06-06 12:14:55,021 | INFO     | this job has now completed (state=finished)
[2025-06-06 08:15:13] 2025-06-06 12:14:55,021 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 08:15:13] 2025-06-06 12:14:55,021 | INFO     | log transfer has been attempted: DONE
[2025-06-06 08:15:13] 2025-06-06 12:14:55,021 | INFO     | job 6669136061 has finished - writing final server update
[2025-06-06 08:15:13] 2025-06-06 12:14:55,021 | INFO     | total number of processed events: 400 (read)
[2025-06-06 08:15:13] 2025-06-06 12:14:55,039 | INFO     | executing command: lscpu
[2025-06-06 08:15:13] 2025-06-06 12:14:55,108 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 08:15:13] 2025-06-06 12:14:57,516 | INFO     | monitor loop #342: job 0:6669136061 is in state 'finished'
[2025-06-06 08:15:13] 2025-06-06 12:14:57,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:15:13] 2025-06-06 12:14:58,907 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 08:15:13] 2025-06-06 12:14:58,908 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669136061/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:15:13] 2025-06-06 12:14:58,909 | INFO     | extracted standard info from prmon json
[2025-06-06 08:15:13] 2025-06-06 12:14:58,909 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:15:13] 2025-06-06 12:14:58,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:15:13] 2025-06-06 12:14:58,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:15:13] 2025-06-06 12:14:58,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:15:13] 2025-06-06 12:14:58,912 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:15:13] 2025-06-06 12:14:58,912 | INFO     | sum of square deviations: 110961928.98591547
[2025-06-06 08:15:13] 2025-06-06 12:14:58,913 | INFO     | sum of deviations: -5634264477.478872
[2025-06-06 08:15:13] 2025-06-06 12:14:58,913 | INFO     | mean x: 1749209816.0140846
[2025-06-06 08:15:13] 2025-06-06 12:14:58,913 | INFO     | mean y: 2431352.4788732394
[2025-06-06 08:15:13] 2025-06-06 12:14:58,913 | INFO     | -- intersect: 88821279583.53731
[2025-06-06 08:15:13] 2025-06-06 12:14:58,913 | INFO     | intersect: 88821279583.53731
[2025-06-06 08:15:13] 2025-06-06 12:14:58,914 | INFO     | chi2: 0.11075728887529729
[2025-06-06 08:15:13] 2025-06-06 12:14:58,914 | INFO     | -- intersect: 88821279583.53731
[2025-06-06 08:15:13] 2025-06-06 12:14:58,914 | INFO     | current memory leak: -50.78 B/s (using 71 data points, chi2=0.11)
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | ..............................
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | . Timing measurements:
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | . get job = 0 s
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | . initial setup = 2 s
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | . payload setup = 4 s
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | . stage-in = 0 s
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | . payload execution = 4712 s
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | . stage-out = 0 s
[2025-06-06 08:15:13] 2025-06-06 12:14:58,915 | INFO     | . log creation = 0 s
[2025-06-06 08:15:13] 2025-06-06 12:14:58,916 | INFO     | ..............................
[2025-06-06 08:15:13] 2025-06-06 12:14:58,999 | INFO     | 
[2025-06-06 08:15:13] 2025-06-06 12:14:58,999 | INFO     | job summary report
[2025-06-06 08:15:13] 2025-06-06 12:14:58,999 | INFO     | --------------------------------------------------
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | PanDA job id: 6669136061
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | task id: 44871837
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | errors: (none)
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | pilot state: finished 
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | transexitcode: 0
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | exeerrorcode: 0
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | exeerrordiag: 
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | exitcode: 0
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | exitmsg: OK
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | cpuconsumptiontime: 45327 s
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | nevents: 400
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | neventsw: 0
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | pid: 3974849
[2025-06-06 08:15:13] 2025-06-06 12:14:59,000 | INFO     | pgrp: 3974849
[2025-06-06 08:15:13] 2025-06-06 12:14:59,001 | INFO     | corecount: 12
[2025-06-06 08:15:13] 2025-06-06 12:14:59,001 | INFO     | event service: False
[2025-06-06 08:15:13] 2025-06-06 12:14:59,001 | INFO     | sizes: {0: 2397386, 3: 2397592, 11: 2397620, 4721: 2423797, 4722: 2432738, 4725: 2432794, 4731: 2433092}
[2025-06-06 08:15:13] 2025-06-06 12:14:59,001 | INFO     | --------------------------------------------------
[2025-06-06 08:15:13] 2025-06-06 12:14:59,001 | INFO     | 
[2025-06-06 08:15:13] 2025-06-06 12:14:59,001 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 08:15:13] 2025-06-06 12:14:59,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:15:13] 2025-06-06 12:14:59,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:15:13] 2025-06-06 12:14:59,020 | INFO     | job 6669136061 has completed (purged errors)
[2025-06-06 08:15:13] 2025-06-06 12:14:59,020 | INFO     | overall cleanup function is called
[2025-06-06 08:15:13] 2025-06-06 12:14:59,265 | INFO     | PID=3966926 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 08:15:13] 2025-06-06 12:14:59,266 | INFO     | .. there are 15 such processes running
[2025-06-06 08:15:13] 2025-06-06 12:15:00,030 | INFO     | --- collectZombieJob: --- 10, [3974849]
[2025-06-06 08:15:13] 2025-06-06 12:15:00,031 | INFO     | zombie collector waiting for pid 3974849
[2025-06-06 08:15:13] 2025-06-06 12:15:00,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:15:13] 2025-06-06 12:15:00,031 | INFO     | collected zombie processes
[2025-06-06 08:15:13] 2025-06-06 12:15:00,031 | INFO     | will attempt to kill all subprocesses of pid=3974849
[2025-06-06 08:15:13] 2025-06-06 12:15:00,279 | INFO     | process IDs to be killed: [3974849] (in reverse order)
[2025-06-06 08:15:13] 2025-06-06 12:15:00,367 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:15:13] 2025-06-06 12:15:00,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:15:13] 2025-06-06 12:15:00,378 | INFO     | did not find any defunct processes belonging to 3974849
[2025-06-06 08:15:13] 2025-06-06 12:15:00,389 | INFO     | did not find any defunct processes belonging to 3974849
[2025-06-06 08:15:13] 2025-06-06 12:15:00,389 | INFO     | ready for new job
[2025-06-06 08:15:13] 2025-06-06 12:15:00,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:15:13] 2025-06-06 12:15:00,391 | INFO     | **************************************
[2025-06-06 08:15:13] 2025-06-06 12:15:00,391 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:15:13] 2025-06-06 12:15:00,391 | INFO     | **************************************
[2025-06-06 08:15:13] 2025-06-06 12:15:00,391 | INFO     | 
[2025-06-06 08:15:13] 2025-06-06 12:15:00,406 | INFO     | architecture information:
[2025-06-06 08:15:13] 2025-06-06 12:15:00,407 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:15:13] 2025-06-06 12:15:00,421 | INFO     | cat /etc/os-release:
[2025-06-06 08:15:13] NAME="CentOS Linux"
[2025-06-06 08:15:13] VERSION="7 (Core)"
[2025-06-06 08:15:13] ID="centos"
[2025-06-06 08:15:13] ID_LIKE="rhel fedora"
[2025-06-06 08:15:13] VERSION_ID="7"
[2025-06-06 08:15:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:15:13] ANSI_COLOR="0;31"
[2025-06-06 08:15:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:15:13] HOME_URL="https://www.centos.org/"
[2025-06-06 08:15:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:15:13] 
[2025-06-06 08:15:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:15:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:15:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:15:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:15:13] 
[2025-06-06 08:15:13] 2025-06-06 12:15:00,422 | INFO     | **************************************
[2025-06-06 08:15:13] 2025-06-06 12:15:00,924 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 08:15:13] 2025-06-06 12:15:00,941 | INFO     | sufficient remaining disk space (76453773312 B)
[2025-06-06 08:15:13] 2025-06-06 12:15:00,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:15:13] 2025-06-06 12:15:00,942 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:15:13] 2025-06-06 12:15:00,942 | INFO     | update_server=False
[2025-06-06 08:15:13] 2025-06-06 12:15:00,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:15:13] 2025-06-06 12:15:00,942 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:15:13] 2025-06-06 12:15:00,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:15:13] 2025-06-06 12:15:01,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:15:13] 2025-06-06 12:15:01,026 | INFO     | aborting loop
[2025-06-06 08:15:13] 2025-06-06 12:15:01,233 | INFO     | all data control threads have been joined
[2025-06-06 08:15:13] 2025-06-06 12:15:01,270 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:15:13] 2025-06-06 12:15:01,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:15:13] 2025-06-06 12:15:01,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:15:13] 2025-06-06 12:15:01,949 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:01,950 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,033 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,066 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,080 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,128 | INFO     | [job] validate thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,191 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,239 | INFO     | [data] control thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,300 | INFO     | all job control threads have been joined
[2025-06-06 08:15:13] 2025-06-06 12:15:02,388 | INFO     | all payload control threads have been joined
[2025-06-06 08:15:13] 2025-06-06 12:15:02,523 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,686 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:02,948 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:03,188 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:03,305 | INFO     | [job] control thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:03,318 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:03,392 | INFO     | [payload] control thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:03,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:15:13] 2025-06-06 12:15:07,474 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:15:13] 2025-06-06 12:15:08,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710537750336)>', '<ExcThread(monitor, started 140709906609920)>']
[2025-06-06 08:15:13] 2025-06-06 12:15:08,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:15:13] 2025-06-06 12:15:08,301 | INFO     | [monitor] control thread has ended
[2025-06-06 08:15:13] 2025-06-06 12:15:13,126 | INFO     | all workflow threads have been joined
[2025-06-06 08:15:13] 2025-06-06 12:15:13,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:15:13] 2025-06-06 12:15:13,127 | INFO     | traces error code: 0
[2025-06-06 08:15:13] 2025-06-06 12:15:13,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:15:13] 2025-06-06 12:15:13,292 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:15:13] 2025-06-06 12:15:13,294 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:15:13] 2025-06-06 12:15:13,296 [wrapper] pilotpid: 3966926
[2025-06-06 08:15:13] 2025-06-06 12:15:13,305 [wrapper] Pilot exit status: 0
[2025-06-06 08:15:13] 2025-06-06 12:15:13,314 [wrapper] pandaids: 6669136061
[2025-06-06 08:15:13] 2025-06-06 12:15:13,374 [wrapper] cleanup supervisor_pilot   76113 3966927
[2025-06-06 08:15:13] 2025-06-06 12:15:13,377 [wrapper] Test setup, not cleaning
[2025-06-06 08:15:13] 2025-06-06 12:15:13,379 [wrapper] apfmon messages muted
[2025-06-06 08:15:13] 2025-06-06 12:15:13,381 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:15:13] 2025-06-06 12:15:13,383 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:15:13]  *** Error codes and diagnostics ***
[2025-06-06 08:15:13]     "exeErrorCode": 0,
[2025-06-06 08:15:13]     "exeErrorDiag": "",
[2025-06-06 08:15:13]     "pilotErrorCode": 0,
[2025-06-06 08:15:13]     "pilotErrorDiag": "",
[2025-06-06 08:15:13]  *** Listing of results directory ***
[2025-06-06 08:15:13] total 414944
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas    495897 May 28 23:09 pilot3.tar.gz
[2025-06-06 08:15:13] -rwx------. 1 boincer umatlas     37140 May 28 23:14 runpilot2-wrapper.sh
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas      5111 May 28 23:14 queuedata.json
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas       100 Jun  6 06:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:15:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 06:55 run_atlas
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas       105 Jun  6 06:55 job.xml
[2025-06-06 08:15:13] -rw-r--r--. 2 boincer umatlas 226180283 Jun  6 06:55 EVNT.44871834._003665.pool.root.1
[2025-06-06 08:15:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 06:55 start_atlas.sh
[2025-06-06 08:15:13] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 06:55 shared
[2025-06-06 08:15:13] -rw-r--r--. 2 boincer umatlas    508877 Jun  6 06:55 input.tar.gz
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas         0 Jun  6 06:55 boinc_lockfile
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas      2556 Jun  6 06:55 pandaJob.out
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas    985732 Jun  6 06:55 agis_schedconf.cvmfs.json
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas   1598969 Jun  6 06:55 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:15:13] drwx------. 4 boincer umatlas      4096 Jun  6 06:55 pilot3
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas      6842 Jun  6 08:13 init_data.xml
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas 193261288 Jun  6 08:14 HITS.44871837._094262.pool.root.1
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas       529 Jun  6 08:14 boinc_task_state.xml
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas        95 Jun  6 08:14 pilot_heartbeat.json
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas      1040 Jun  6 08:14 memory_monitor_summary.json
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas    351529 Jun  6 08:14 log.44871837._094262.job.log.tgz.1
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas        27 Jun  6 08:14 wrapper_checkpoint.txt
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 08:14 boinc_mmap_file
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas      7724 Jun  6 08:14 heartbeat.json
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas      4353 Jun  6 08:15 pilotlog.txt
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas    464470 Jun  6 08:15 log.44871837._094262.job.log.1
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas       357 Jun  6 08:15 output.list
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas       620 Jun  6 08:15 runtime_log
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas    839680 Jun  6 08:15 result.tar.gz
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas       654 Jun  6 08:15 tPoNDmSuie7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxfdKDmidvLNn.diag
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas      8666 Jun  6 08:15 runtime_log.err
[2025-06-06 08:15:13] -rw-r--r--. 1 boincer umatlas     21613 Jun  6 08:15 stderr.txt
[2025-06-06 08:15:13] HITS file was successfully produced:
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas 193261288 Jun  6 08:14 shared/HITS.pool.root.1
[2025-06-06 08:15:13]  *** Contents of shared directory: ***
[2025-06-06 08:15:13] total 410952
[2025-06-06 08:15:13] -rw-r--r--. 2 boincer umatlas 226180283 Jun  6 06:55 ATLAS.root_0
[2025-06-06 08:15:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 06:55 start_atlas.sh
[2025-06-06 08:15:13] -rw-r--r--. 2 boincer umatlas    508877 Jun  6 06:55 input.tar.gz
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas 193261288 Jun  6 08:14 HITS.pool.root.1
[2025-06-06 08:15:13] -rw-------. 1 boincer umatlas    839680 Jun  6 08:15 result.tar.gz
08:15:14 (3963287): run_atlas exited; CPU time 45420.529807
08:15:14 (3963287): called boinc_finish(0)

</stderr_txt>
]]>

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