Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:32:28 (2259688): wrapper (7.7.26015): starting
06:32:28 (2259688): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 06:32:28] Arguments: --nthreads 8
[2025-06-06 06:32:28] Threads: 8
[2025-06-06 06:32:28] Checking for CVMFS
[2025-06-06 06:32:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 06:32:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 06:32:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 06:32:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 06:32:28] 2.12.6.0 8999 40070 510328 146850 2 315 32471547 32935937 11350 16776704 1 176662440 99.601 192303869 25580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 06:32:28] CVMFS is ok
[2025-06-06 06:32:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:32:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 06:32:28] Further information can be found at the LHC@home message board.
[2025-06-06 06:32:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:32:28] Checking for apptainer binary...
[2025-06-06 06:32:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 06:32:28] Running /usr/bin/apptainer --version
[2025-06-06 06:32:28] apptainer version 1.4.1-1.el9
[2025-06-06 06:32:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:32:28] c7-11-16.aglt2.org
[2025-06-06 06:32:28] apptainer works
[2025-06-06 06:32:28] Set ATHENA_PROC_NUMBER=8
[2025-06-06 06:32:28] Set ATHENA_CORE_NUMBER=8
[2025-06-06 06:32:28] Starting ATLAS job with PandaID=6669234052
[2025-06-06 06:32:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:04:21]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:04:21]  guid=1bacaa8b-df94-41c6-a505-ad76e7a82fe6
[2025-06-06 08:04:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 08:04:21]  is_altstaged=None
[2025-06-06 08:04:21]  is_tar=False
[2025-06-06 08:04:21]  lfn=log.44871837._094617.job.log.tgz.1
[2025-06-06 08:04:21]  mtime=0
[2025-06-06 08:04:21]  protocol_id=None
[2025-06-06 08:04:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 08:04:21]  replicas=None
[2025-06-06 08:04:21]  scope=mc23_13p6TeV
[2025-06-06 08:04:21]  status=None
[2025-06-06 08:04:21]  status_code=0
[2025-06-06 08:04:21]  storage_token=
[2025-06-06 08:04:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669234052/log.44871837._094617.job.log.tgz.1
[2025-06-06 08:04:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/d9/log.44871837._094617.job.log.tgz.1
[2025-06-06 08:04:21]  workdir=None
[2025-06-06 08:04:21] ]
[2025-06-06 08:04:21] 2025-06-06 12:03:56,936 | INFO     | transferring file log.44871837._094617.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669234052/log.44871837._094617.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 08:04:21] 2025-06-06 12:03:56,936 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669234052/log.44871837._094617.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._094617.job
[2025-06-06 08:04:21] 2025-06-06 12:03:56,958 | INFO     | adding to output.list: log.44871837._094617.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/d9/log.44871837._094617.job.log.tg
[2025-06-06 08:04:21] 2025-06-06 12:03:56,959 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 08:04:21] 2025-06-06 12:03:56,959 | INFO     | summary of transferred files:
[2025-06-06 08:04:21] 2025-06-06 12:03:56,959 | INFO     |  -- lfn=log.44871837._094617.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 08:04:21] 2025-06-06 12:03:56,959 | INFO     | stage-out finished correctly
[2025-06-06 08:04:21] 2025-06-06 12:03:57,032 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 08:04:21] 2025-06-06 12:03:57,108 | INFO     | job 6669234052 has state=finished
[2025-06-06 08:04:21] 2025-06-06 12:03:57,109 | INFO     | preparing for final server update for job 6669234052 in state='finished'
[2025-06-06 08:04:21] 2025-06-06 12:03:57,110 | INFO     | this job has now completed (state=finished)
[2025-06-06 08:04:21] 2025-06-06 12:03:57,110 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 08:04:21] 2025-06-06 12:03:57,110 | INFO     | log transfer has been attempted: DONE
[2025-06-06 08:04:21] 2025-06-06 12:03:57,110 | INFO     | job 6669234052 has finished - writing final server update
[2025-06-06 08:04:21] 2025-06-06 12:03:57,110 | INFO     | total number of processed events: 400 (read)
[2025-06-06 08:04:21] 2025-06-06 12:03:57,127 | INFO     | executing command: lscpu
[2025-06-06 08:04:21] 2025-06-06 12:03:57,197 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 08:04:21] 2025-06-06 12:03:58,105 | INFO     | monitor loop #407: job 0:6669234052 is in state 'finished'
[2025-06-06 08:04:21] 2025-06-06 12:03:58,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:04:21] 2025-06-06 12:04:00,608 | INFO     | monitor loop #408: job 0:6669234052 is in state 'finished'
[2025-06-06 08:04:21] 2025-06-06 12:04:00,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:04:21] 2025-06-06 12:04:01,233 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 08:04:21] 2025-06-06 12:04:01,234 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669234052/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:04:21] 2025-06-06 12:04:01,235 | INFO     | extracted standard info from prmon json
[2025-06-06 08:04:21] 2025-06-06 12:04:01,235 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:04:21] 2025-06-06 12:04:01,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:04:21] 2025-06-06 12:04:01,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:04:21] 2025-06-06 12:04:01,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:04:21] 2025-06-06 12:04:01,237 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:04:21] 2025-06-06 12:04:01,238 | INFO     | sum of square deviations: 177275882.0
[2025-06-06 08:04:21] 2025-06-06 12:04:01,238 | INFO     | sum of deviations: -426184430.00000024
[2025-06-06 08:04:21] 2025-06-06 12:04:01,238 | INFO     | mean x: 1749208793.0
[2025-06-06 08:04:21] 2025-06-06 12:04:01,238 | INFO     | mean y: 2226225.373493976
[2025-06-06 08:04:21] 2025-06-06 12:04:01,238 | INFO     | -- intersect: 4207454505.6405945
[2025-06-06 08:04:21] 2025-06-06 12:04:01,238 | INFO     | intersect: 4207454505.6405945
[2025-06-06 08:04:21] 2025-06-06 12:04:01,239 | INFO     | chi2: 0.04438974499904883
[2025-06-06 08:04:21] 2025-06-06 12:04:01,239 | INFO     | -- intersect: 4207454505.6405945
[2025-06-06 08:04:21] 2025-06-06 12:04:01,239 | INFO     | current memory leak: -2.40 B/s (using 83 data points, chi2=0.04)
[2025-06-06 08:04:21] 2025-06-06 12:04:01,239 | INFO     | ..............................
[2025-06-06 08:04:21] 2025-06-06 12:04:01,239 | INFO     | . Timing measurements:
[2025-06-06 08:04:21] 2025-06-06 12:04:01,240 | INFO     | . get job = 0 s
[2025-06-06 08:04:21] 2025-06-06 12:04:01,240 | INFO     | . initial setup = 2 s
[2025-06-06 08:04:21] 2025-06-06 12:04:01,240 | INFO     | . payload setup = 6 s
[2025-06-06 08:04:21] 2025-06-06 12:04:01,240 | INFO     | . stage-in = 0 s
[2025-06-06 08:04:21] 2025-06-06 12:04:01,240 | INFO     | . payload execution = 5450 s
[2025-06-06 08:04:21] 2025-06-06 12:04:01,240 | INFO     | . stage-out = 0 s
[2025-06-06 08:04:21] 2025-06-06 12:04:01,240 | INFO     | . log creation = 0 s
[2025-06-06 08:04:21] 2025-06-06 12:04:01,240 | INFO     | ..............................
[2025-06-06 08:04:21] 2025-06-06 12:04:01,772 | INFO     | 
[2025-06-06 08:04:21] 2025-06-06 12:04:01,772 | INFO     | job summary report
[2025-06-06 08:04:21] 2025-06-06 12:04:01,772 | INFO     | --------------------------------------------------
[2025-06-06 08:04:21] 2025-06-06 12:04:01,772 | INFO     | PanDA job id: 6669234052
[2025-06-06 08:04:21] 2025-06-06 12:04:01,772 | INFO     | task id: 44871837
[2025-06-06 08:04:21] 2025-06-06 12:04:01,772 | INFO     | errors: (none)
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | pilot state: finished 
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | transexitcode: 0
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | exeerrorcode: 0
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | exeerrordiag: 
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | exitcode: 0
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | exitmsg: OK
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | cpuconsumptiontime: 40255 s
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | nevents: 400
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | neventsw: 0
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | pid: 2274664
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | pgrp: 2274664
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | corecount: 8
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | event service: False
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | sizes: {0: 2397392, 5: 2397598, 11: 2397654, 5461: 2424212, 5462: 2433209, 5466: 2433323}
[2025-06-06 08:04:21] 2025-06-06 12:04:01,773 | INFO     | --------------------------------------------------
[2025-06-06 08:04:21] 2025-06-06 12:04:01,774 | INFO     | 
[2025-06-06 08:04:21] 2025-06-06 12:04:01,774 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 08:04:21] 2025-06-06 12:04:01,798 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,798 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,798 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,798 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,798 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:04:21] 2025-06-06 12:04:01,799 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,800 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:04:21] 2025-06-06 12:04:01,800 | INFO     | job 6669234052 has completed (purged errors)
[2025-06-06 08:04:21] 2025-06-06 12:04:01,800 | INFO     | overall cleanup function is called
[2025-06-06 08:04:21] 2025-06-06 12:04:02,596 | INFO     | PID=2263463 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 08:04:21] 2025-06-06 12:04:02,596 | INFO     | .. there are 15 such processes running
[2025-06-06 08:04:21] 2025-06-06 12:04:02,808 | INFO     | --- collectZombieJob: --- 10, [2274664]
[2025-06-06 08:04:21] 2025-06-06 12:04:02,808 | INFO     | zombie collector waiting for pid 2274664
[2025-06-06 08:04:21] 2025-06-06 12:04:02,808 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:04:21] 2025-06-06 12:04:02,808 | INFO     | collected zombie processes
[2025-06-06 08:04:21] 2025-06-06 12:04:02,808 | INFO     | will attempt to kill all subprocesses of pid=2274664
[2025-06-06 08:04:21] 2025-06-06 12:04:03,103 | INFO     | process IDs to be killed: [2274664] (in reverse order)
[2025-06-06 08:04:21] 2025-06-06 12:04:03,216 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:04:21] 2025-06-06 12:04:03,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:04:21] 2025-06-06 12:04:03,230 | INFO     | did not find any defunct processes belonging to 2274664
[2025-06-06 08:04:21] 2025-06-06 12:04:03,243 | INFO     | did not find any defunct processes belonging to 2274664
[2025-06-06 08:04:21] 2025-06-06 12:04:03,244 | INFO     | ready for new job
[2025-06-06 08:04:21] 2025-06-06 12:04:03,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:04:21] 2025-06-06 12:04:03,246 | INFO     | **************************************
[2025-06-06 08:04:21] 2025-06-06 12:04:03,246 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:04:21] 2025-06-06 12:04:03,246 | INFO     | **************************************
[2025-06-06 08:04:21] 2025-06-06 12:04:03,246 | INFO     | 
[2025-06-06 08:04:21] 2025-06-06 12:04:03,263 | INFO     | architecture information:
[2025-06-06 08:04:21] 2025-06-06 12:04:03,264 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:04:21] 2025-06-06 12:04:03,282 | INFO     | cat /etc/os-release:
[2025-06-06 08:04:21] NAME="CentOS Linux"
[2025-06-06 08:04:21] VERSION="7 (Core)"
[2025-06-06 08:04:21] ID="centos"
[2025-06-06 08:04:21] ID_LIKE="rhel fedora"
[2025-06-06 08:04:21] VERSION_ID="7"
[2025-06-06 08:04:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:04:21] ANSI_COLOR="0;31"
[2025-06-06 08:04:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:04:21] HOME_URL="https://www.centos.org/"
[2025-06-06 08:04:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:04:21] 
[2025-06-06 08:04:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:04:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:04:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:04:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:04:21] 
[2025-06-06 08:04:21] 2025-06-06 12:04:03,284 | INFO     | **************************************
[2025-06-06 08:04:21] 2025-06-06 12:04:03,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 08:04:21] 2025-06-06 12:04:03,814 | INFO     | sufficient remaining disk space (96661929984 B)
[2025-06-06 08:04:21] 2025-06-06 12:04:03,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:04:21] 2025-06-06 12:04:03,814 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:04:21] 2025-06-06 12:04:03,815 | INFO     | update_server=False
[2025-06-06 08:04:21] 2025-06-06 12:04:03,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:04:21] 2025-06-06 12:04:03,815 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:04:21] 2025-06-06 12:04:03,980 | INFO     | all data control threads have been joined
[2025-06-06 08:04:21] 2025-06-06 12:04:04,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:04:21] 2025-06-06 12:04:04,118 | INFO     | aborting loop
[2025-06-06 08:04:21] 2025-06-06 12:04:04,301 | INFO     | all job control threads have been joined
[2025-06-06 08:04:21] 2025-06-06 12:04:04,599 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:04:21] 2025-06-06 12:04:04,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:04:21] 2025-06-06 12:04:04,600 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:04:21] 2025-06-06 12:04:04,820 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:04,932 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:04,950 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:04,986 | INFO     | [data] control thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:05,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:04:21] 2025-06-06 12:04:05,123 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:05,291 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:05,310 | INFO     | [job] control thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:05,312 | INFO     | all payload control threads have been joined
[2025-06-06 08:04:21] 2025-06-06 12:04:05,473 | INFO     | [job] validate thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:05,660 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:06,243 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:06,290 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:06,318 | INFO     | [payload] control thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:06,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:04:21] 2025-06-06 12:04:07,048 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:07,337 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:07,822 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:14,090 | INFO     | job.realtimelogging is not enabled
[2025-06-06 08:04:21] 2025-06-06 12:04:15,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:04:21] 2025-06-06 12:04:15,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684530878272)>', '<ExcThread(monitor, started 140684036126464)>']
[2025-06-06 08:04:21] 2025-06-06 12:04:16,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:04:21] 2025-06-06 12:04:16,654 | INFO     | [monitor] control thread has ended
[2025-06-06 08:04:21] 2025-06-06 12:04:20,882 | INFO     | all workflow threads have been joined
[2025-06-06 08:04:21] 2025-06-06 12:04:20,883 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:04:21] 2025-06-06 12:04:20,883 | INFO     | traces error code: 0
[2025-06-06 08:04:21] 2025-06-06 12:04:20,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:04:21] 2025-06-06 12:04:21,033 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:04:21] 2025-06-06 12:04:21,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:04:21] 2025-06-06 12:04:21,043 [wrapper] pilotpid: 2263463
[2025-06-06 08:04:21] 2025-06-06 12:04:21,046 [wrapper] Pilot exit status: 0
[2025-06-06 08:04:21] 2025-06-06 12:04:21,067 [wrapper] pandaids: 6669234052
[2025-06-06 08:04:21] 2025-06-06 12:04:21,152 [wrapper] cleanup supervisor_pilot 2611846 2263464
[2025-06-06 08:04:21] 2025-06-06 12:04:21,155 [wrapper] Test setup, not cleaning
[2025-06-06 08:04:21] 2025-06-06 12:04:21,158 [wrapper] apfmon messages muted
[2025-06-06 08:04:21] 2025-06-06 12:04:21,161 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:04:21] 2025-06-06 12:04:21,164 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:04:21]  *** Error codes and diagnostics ***
[2025-06-06 08:04:21]     "exeErrorCode": 0,
[2025-06-06 08:04:21]     "exeErrorDiag": "",
[2025-06-06 08:04:21]     "pilotErrorCode": 0,
[2025-06-06 08:04:21]     "pilotErrorDiag": "",
[2025-06-06 08:04:21]  *** Listing of results directory ***
[2025-06-06 08:04:21] total 420816
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas      5111 May 29 00:02 queuedata.json
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas    495897 May 29 00:02 pilot3.tar.gz
[2025-06-06 08:04:21] -rwx------. 1 boincer umatlas     37140 May 29 00:04 runpilot2-wrapper.sh
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas       100 Jun  6 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:04:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 06:32 run_atlas
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas       105 Jun  6 06:32 job.xml
[2025-06-06 08:04:21] -rw-r--r--. 2 boincer umatlas 225155694 Jun  6 06:32 EVNT.44871834._003675.pool.root.1
[2025-06-06 08:04:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 06:32 start_atlas.sh
[2025-06-06 08:04:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 06:32 shared
[2025-06-06 08:04:21] -rw-r--r--. 2 boincer umatlas    508882 Jun  6 06:32 input.tar.gz
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas         0 Jun  6 06:32 boinc_lockfile
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas      2559 Jun  6 06:32 pandaJob.out
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas    985686 Jun  6 06:32 agis_schedconf.cvmfs.json
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas   1598969 Jun  6 06:32 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:04:21] drwx------. 4 boincer umatlas      4096 Jun  6 06:32 pilot3
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas 200205637 Jun  6 08:03 HITS.44871837._094617.pool.root.1
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas        95 Jun  6 08:03 pilot_heartbeat.json
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas       530 Jun  6 08:03 boinc_task_state.xml
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas      1031 Jun  6 08:03 memory_monitor_summary.json
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas    323636 Jun  6 08:03 log.44871837._094617.job.log.tgz.1
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas      6898 Jun  6 08:03 init_data.xml
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas      7686 Jun  6 08:04 heartbeat.json
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 08:04 boinc_mmap_file
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas        27 Jun  6 08:04 wrapper_checkpoint.txt
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas      4425 Jun  6 08:04 pilotlog.txt
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas    535825 Jun  6 08:04 log.44871837._094617.job.log.1
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas       357 Jun  6 08:04 output.list
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas       620 Jun  6 08:04 runtime_log
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas    880640 Jun  6 08:04 result.tar.gz
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas       653 Jun  6 08:04 tj9KDmTgje7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAbUKDm8z9nxm.diag
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas      8659 Jun  6 08:04 runtime_log.err
[2025-06-06 08:04:21] -rw-r--r--. 1 boincer umatlas     21336 Jun  6 08:04 stderr.txt
[2025-06-06 08:04:21] HITS file was successfully produced:
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas 200205637 Jun  6 08:03 shared/HITS.pool.root.1
[2025-06-06 08:04:21]  *** Contents of shared directory: ***
[2025-06-06 08:04:21] total 416780
[2025-06-06 08:04:21] -rw-r--r--. 2 boincer umatlas 225155694 Jun  6 06:32 ATLAS.root_0
[2025-06-06 08:04:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 06:32 start_atlas.sh
[2025-06-06 08:04:21] -rw-r--r--. 2 boincer umatlas    508882 Jun  6 06:32 input.tar.gz
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas 200205637 Jun  6 08:03 HITS.pool.root.1
[2025-06-06 08:04:21] -rw-------. 1 boincer umatlas    880640 Jun  6 08:04 result.tar.gz
08:04:22 (2259688): run_atlas exited; CPU time 40311.583576
08:04:22 (2259688): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN