Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:29:49 (3398458): wrapper (7.7.26015): starting
06:29:49 (3398458): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 06:29:49] Arguments: --nthreads 8
[2025-06-06 06:29:49] Threads: 8
[2025-06-06 06:29:49] Checking for CVMFS
[2025-06-06 06:29:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 06:29:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 06:29:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 06:29:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 06:29:49] 2.12.6.0 676006 26490 105228 146849 0 130 29959135 32503809 20609 16776704 0 339126157 99.689 249780258 36815 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 06:29:49] CVMFS is ok
[2025-06-06 06:29:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:29:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 06:29:49] Further information can be found at the LHC@home message board.
[2025-06-06 06:29:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:29:49] Checking for apptainer binary...
[2025-06-06 06:29:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 06:29:49] Running /usr/bin/apptainer --version
[2025-06-06 06:29:49] apptainer version 1.4.1-1.el9
[2025-06-06 06:29:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:29:49] c8-7-2.aglt2.org
[2025-06-06 06:29:49] apptainer works
[2025-06-06 06:29:50] Set ATHENA_PROC_NUMBER=8
[2025-06-06 06:29:50] Set ATHENA_CORE_NUMBER=8
[2025-06-06 06:29:50] Starting ATLAS job with PandaID=6669233945
[2025-06-06 06:29:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:32:01]  *** The last 200 lines of the pilot log: ***
[2025-06-06 07:32:01]  is_altstaged=None
[2025-06-06 07:32:01]  is_tar=False
[2025-06-06 07:32:01]  lfn=log.44871837._094510.job.log.tgz.1
[2025-06-06 07:32:01]  mtime=0
[2025-06-06 07:32:01]  protocol_id=None
[2025-06-06 07:32:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 07:32:01]  replicas=None
[2025-06-06 07:32:01]  scope=mc23_13p6TeV
[2025-06-06 07:32:01]  status=None
[2025-06-06 07:32:01]  status_code=0
[2025-06-06 07:32:01]  storage_token=
[2025-06-06 07:32:01]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6669233945/log.44871837._094510.job.log.tgz.1
[2025-06-06 07:32:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/6a/log.44871837._094510.job.log.tgz.1
[2025-06-06 07:32:01]  workdir=None
[2025-06-06 07:32:01] ]
[2025-06-06 07:32:01] 2025-06-06 11:31:33,319 | INFO     | transferring file log.44871837._094510.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6669233945/log.44871837._094510.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-06 07:32:01] 2025-06-06 11:31:33,320 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6669233945/log.44871837._094510.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._094510.job
[2025-06-06 07:32:01] 2025-06-06 11:31:33,336 | INFO     | adding to output.list: log.44871837._094510.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/6a/log.44871837._094510.job.log.tg
[2025-06-06 07:32:01] 2025-06-06 11:31:33,336 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 07:32:01] 2025-06-06 11:31:33,336 | INFO     | summary of transferred files:
[2025-06-06 07:32:01] 2025-06-06 11:31:33,336 | INFO     |  -- lfn=log.44871837._094510.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 07:32:01] 2025-06-06 11:31:33,336 | INFO     | stage-out finished correctly
[2025-06-06 07:32:01] 2025-06-06 11:31:35,694 | INFO     | monitor loop #275: job 0:6669233945 is in state 'finished'
[2025-06-06 07:32:01] 2025-06-06 11:31:35,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:32:01] 2025-06-06 11:31:36,808 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 07:32:01] 2025-06-06 11:31:37,409 | INFO     | job 6669233945 has state=finished
[2025-06-06 07:32:01] 2025-06-06 11:31:37,409 | INFO     | preparing for final server update for job 6669233945 in state='finished'
[2025-06-06 07:32:01] 2025-06-06 11:31:37,409 | INFO     | this job has now completed (state=finished)
[2025-06-06 07:32:01] 2025-06-06 11:31:37,409 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 07:32:01] 2025-06-06 11:31:37,410 | INFO     | log transfer has been attempted: DONE
[2025-06-06 07:32:01] 2025-06-06 11:31:37,410 | INFO     | job 6669233945 has finished - writing final server update
[2025-06-06 07:32:01] 2025-06-06 11:31:37,410 | INFO     | total number of processed events: 400 (read)
[2025-06-06 07:32:01] 2025-06-06 11:31:37,426 | INFO     | executing command: lscpu
[2025-06-06 07:32:01] 2025-06-06 11:31:37,510 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 07:32:01] 2025-06-06 11:31:38,197 | INFO     | monitor loop #276: job 0:6669233945 is in state 'finished'
[2025-06-06 07:32:01] 2025-06-06 11:31:38,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:32:01] 2025-06-06 11:31:38,266 | INFO     | 3699s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 07:32:01] 2025-06-06 11:31:40,700 | INFO     | monitor loop #277: job 0:6669233945 is in state 'finished'
[2025-06-06 07:32:01] 2025-06-06 11:31:40,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:32:01] 2025-06-06 11:31:41,037 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 07:32:01] 2025-06-06 11:31:41,038 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6669233945/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:32:01] 2025-06-06 11:31:41,038 | INFO     | extracted standard info from prmon json
[2025-06-06 07:32:01] 2025-06-06 11:31:41,039 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:32:01] 2025-06-06 11:31:41,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:32:01] 2025-06-06 11:31:41,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:32:01] 2025-06-06 11:31:41,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | sum of square deviations: 46147842.0
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | sum of deviations: -427363926.0
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | mean x: 1749207721.0
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | mean y: 2548898.2641509436
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | -- intersect: 16201535603.55955
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | intersect: 16201535603.55955
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | chi2: 0.0038092704873877396
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | -- intersect: 16201535603.55955
[2025-06-06 07:32:01] 2025-06-06 11:31:41,040 | INFO     | current memory leak: -9.26 B/s (using 53 data points, chi2=0.00)
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | ..............................
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | . Timing measurements:
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | . get job = 0 s
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | . initial setup = 2 s
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | . payload setup = 6 s
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | . stage-in = 0 s
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | . payload execution = 3663 s
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | . stage-out = 0 s
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | . log creation = 0 s
[2025-06-06 07:32:01] 2025-06-06 11:31:41,041 | INFO     | ..............................
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | 
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | job summary report
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | --------------------------------------------------
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | PanDA job id: 6669233945
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | task id: 44871837
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | errors: (none)
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | pilot state: finished 
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | transexitcode: 0
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | exeerrorcode: 0
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | exeerrordiag: 
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | exitcode: 0
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | exitmsg: OK
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | cpuconsumptiontime: 26648 s
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | nevents: 400
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | neventsw: 0
[2025-06-06 07:32:01] 2025-06-06 11:31:41,212 | INFO     | pid: 3413575
[2025-06-06 07:32:01] 2025-06-06 11:31:41,213 | INFO     | pgrp: 3413575
[2025-06-06 07:32:01] 2025-06-06 11:31:41,213 | INFO     | corecount: 8
[2025-06-06 07:32:01] 2025-06-06 11:31:41,213 | INFO     | event service: False
[2025-06-06 07:32:01] 2025-06-06 11:31:41,213 | INFO     | sizes: {0: 2396563, 1: 2397419, 5: 2397625, 11: 2397681, 3674: 2432166, 3678: 2432166, 3682: 2432464}
[2025-06-06 07:32:01] 2025-06-06 11:31:41,213 | INFO     | --------------------------------------------------
[2025-06-06 07:32:01] 2025-06-06 11:31:41,213 | INFO     | 
[2025-06-06 07:32:01] 2025-06-06 11:31:41,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-06 07:32:01] 2025-06-06 11:31:41,229 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 07:32:01] 2025-06-06 11:31:41,230 | INFO     | job 6669233945 has completed (purged errors)
[2025-06-06 07:32:01] 2025-06-06 11:31:41,231 | INFO     | overall cleanup function is called
[2025-06-06 07:32:01] 2025-06-06 11:31:42,237 | INFO     | --- collectZombieJob: --- 10, [3413575]
[2025-06-06 07:32:01] 2025-06-06 11:31:42,237 | INFO     | zombie collector waiting for pid 3413575
[2025-06-06 07:32:01] 2025-06-06 11:31:42,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 07:32:01] 2025-06-06 11:31:42,237 | INFO     | collected zombie processes
[2025-06-06 07:32:01] 2025-06-06 11:31:42,237 | INFO     | will attempt to kill all subprocesses of pid=3413575
[2025-06-06 07:32:01] 2025-06-06 11:31:42,586 | INFO     | process IDs to be killed: [3413575] (in reverse order)
[2025-06-06 07:32:01] 2025-06-06 11:31:42,718 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 07:32:01] 2025-06-06 11:31:42,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 07:32:01] 2025-06-06 11:31:42,738 | INFO     | did not find any defunct processes belonging to 3413575
[2025-06-06 07:32:01] 2025-06-06 11:31:42,757 | INFO     | did not find any defunct processes belonging to 3413575
[2025-06-06 07:32:01] 2025-06-06 11:31:42,758 | INFO     | ready for new job
[2025-06-06 07:32:01] 2025-06-06 11:31:42,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 07:32:01] 2025-06-06 11:31:42,759 | INFO     | **************************************
[2025-06-06 07:32:01] 2025-06-06 11:31:42,759 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 07:32:01] 2025-06-06 11:31:42,759 | INFO     | **************************************
[2025-06-06 07:32:01] 2025-06-06 11:31:42,759 | INFO     | 
[2025-06-06 07:32:01] 2025-06-06 11:31:42,776 | INFO     | architecture information:
[2025-06-06 07:32:01] 2025-06-06 11:31:42,777 | INFO     | executing command: cat /etc/os-release
[2025-06-06 07:32:01] 2025-06-06 11:31:42,789 | INFO     | cat /etc/os-release:
[2025-06-06 07:32:01] NAME="CentOS Linux"
[2025-06-06 07:32:01] VERSION="7 (Core)"
[2025-06-06 07:32:01] ID="centos"
[2025-06-06 07:32:01] ID_LIKE="rhel fedora"
[2025-06-06 07:32:01] VERSION_ID="7"
[2025-06-06 07:32:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 07:32:01] ANSI_COLOR="0;31"
[2025-06-06 07:32:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 07:32:01] HOME_URL="https://www.centos.org/"
[2025-06-06 07:32:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 07:32:01] 
[2025-06-06 07:32:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 07:32:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 07:32:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 07:32:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 07:32:01] 
[2025-06-06 07:32:01] 2025-06-06 11:31:42,790 | INFO     | **************************************
[2025-06-06 07:32:01] 2025-06-06 11:31:43,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-06 07:32:01] 2025-06-06 11:31:43,306 | INFO     | sufficient remaining disk space (96007618560 B)
[2025-06-06 07:32:01] 2025-06-06 11:31:43,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 07:32:01] 2025-06-06 11:31:43,306 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 07:32:01] 2025-06-06 11:31:43,307 | INFO     | update_server=False
[2025-06-06 07:32:01] 2025-06-06 11:31:43,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 07:32:01] 2025-06-06 11:31:43,307 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 07:32:01] 2025-06-06 11:31:43,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 07:32:01] 2025-06-06 11:31:43,307 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 07:32:01] 2025-06-06 11:31:43,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 07:32:01] 2025-06-06 11:31:43,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 07:32:01] 2025-06-06 11:31:43,316 | INFO     | all job control threads have been joined
[2025-06-06 07:32:01] 2025-06-06 11:31:43,325 | INFO     | all data control threads have been joined
[2025-06-06 07:32:01] 2025-06-06 11:31:43,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 07:32:01] 2025-06-06 11:31:44,207 | INFO     | all payload control threads have been joined
[2025-06-06 07:32:01] 2025-06-06 11:31:44,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:32:01] 2025-06-06 11:31:44,208 | INFO     | aborting loop
[2025-06-06 07:32:01] 2025-06-06 11:31:44,310 | INFO     | [job] retrieve thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:44,321 | INFO     | [job] control thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:44,324 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:44,330 | INFO     | [data] control thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:44,331 | INFO     | [payload] failed_post thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:45,016 | INFO     | [data] copytool_in thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:45,071 | INFO     | [payload] validate_post thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:45,213 | INFO     | [job] job monitor thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:45,214 | INFO     | [payload] control thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:45,260 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:45,285 | INFO     | [job] validate thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:45,288 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:45,903 | INFO     | [data] copytool_out thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:46,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:32:01] 2025-06-06 11:31:47,107 | INFO     | [job] queue monitor thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:47,313 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:53,410 | INFO     | job.realtimelogging is not enabled
[2025-06-06 07:32:01] 2025-06-06 11:31:54,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 07:32:01] 2025-06-06 11:31:56,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325361518400)>', '<ExcThread(monitor, started 140324861093632)>']
[2025-06-06 07:32:01] 2025-06-06 11:31:56,362 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 07:32:01] 2025-06-06 11:31:56,362 | INFO     | [monitor] control thread has ended
[2025-06-06 07:32:01] 2025-06-06 11:32:01,273 | INFO     | all workflow threads have been joined
[2025-06-06 07:32:01] 2025-06-06 11:32:01,274 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 07:32:01] 2025-06-06 11:32:01,274 | INFO     | traces error code: 0
[2025-06-06 07:32:01] 2025-06-06 11:32:01,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 07:32:01] 2025-06-06 11:32:01,472 [wrapper] ==== pilot stdout END ====
[2025-06-06 07:32:01] 2025-06-06 11:32:01,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 07:32:01] 2025-06-06 11:32:01,476 [wrapper] pilotpid: 3403275
[2025-06-06 07:32:01] 2025-06-06 11:32:01,479 [wrapper] Pilot exit status: 0
[2025-06-06 07:32:01] 2025-06-06 11:32:01,489 [wrapper] pandaids: 6669233945
[2025-06-06 07:32:01] 2025-06-06 11:32:01,588 [wrapper] cleanup supervisor_pilot   52867 3403276
[2025-06-06 07:32:01] 2025-06-06 11:32:01,590 [wrapper] Test setup, not cleaning
[2025-06-06 07:32:01] 2025-06-06 11:32:01,592 [wrapper] apfmon messages muted
[2025-06-06 07:32:01] 2025-06-06 11:32:01,595 [wrapper] ==== wrapper stdout END ====
[2025-06-06 07:32:01] 2025-06-06 11:32:01,598 [wrapper] ==== wrapper stderr END ====
[2025-06-06 07:32:01]  *** Error codes and diagnostics ***
[2025-06-06 07:32:01]     "exeErrorCode": 0,
[2025-06-06 07:32:01]     "exeErrorDiag": "",
[2025-06-06 07:32:01]     "pilotErrorCode": 0,
[2025-06-06 07:32:01]     "pilotErrorDiag": "",
[2025-06-06 07:32:01]  *** Listing of results directory ***
[2025-06-06 07:32:01] total 412696
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas    495897 May 28 23:56 pilot3.tar.gz
[2025-06-06 07:32:01] -rwx------. 1 boincer umatlas     37140 May 28 23:57 runpilot2-wrapper.sh
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas      5111 May 28 23:57 queuedata.json
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas       100 Jun  6 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 07:32:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  6 06:29 run_atlas
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas       105 Jun  6 06:29 job.xml
[2025-06-06 07:32:01] -rw-r--r--. 2 boincer umatlas 223383069 Jun  6 06:29 EVNT.44871834._003671.pool.root.1
[2025-06-06 07:32:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 06:29 start_atlas.sh
[2025-06-06 07:32:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 06:29 shared
[2025-06-06 07:32:01] -rw-r--r--. 2 boincer umatlas    508873 Jun  6 06:29 input.tar.gz
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas         0 Jun  6 06:29 boinc_lockfile
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas      2558 Jun  6 06:29 pandaJob.out
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas    985686 Jun  6 06:29 agis_schedconf.cvmfs.json
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas   1598969 Jun  6 06:30 agis_ddmendpoints.agis.ALL.json
[2025-06-06 07:32:01] drwx------. 4 boincer umatlas      4096 Jun  6 06:30 pilot3
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas      7158 Jun  6 07:30 init_data.xml
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas 194043062 Jun  6 07:31 HITS.44871837._094510.pool.root.1
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas       529 Jun  6 07:31 boinc_task_state.xml
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas        95 Jun  6 07:31 pilot_heartbeat.json
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas      1028 Jun  6 07:31 memory_monitor_summary.json
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas    295835 Jun  6 07:31 log.44871837._094510.job.log.tgz.1
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas      7680 Jun  6 07:31 heartbeat.json
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas        27 Jun  6 07:31 wrapper_checkpoint.txt
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 07:31 boinc_mmap_file
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas      4548 Jun  6 07:32 pilotlog.txt
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas    377120 Jun  6 07:32 log.44871837._094510.job.log.1
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas       357 Jun  6 07:32 output.list
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas       620 Jun  6 07:32 runtime_log
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas    696320 Jun  6 07:32 result.tar.gz
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas      8649 Jun  6 07:32 runtime_log.err
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas       652 Jun  6 07:32 QnbKDmnZje7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUaUKDmot5CVm.diag
[2025-06-06 07:32:01] -rw-r--r--. 1 boincer umatlas     21417 Jun  6 07:32 stderr.txt
[2025-06-06 07:32:01] HITS file was successfully produced:
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas 194043062 Jun  6 07:31 shared/HITS.pool.root.1
[2025-06-06 07:32:01]  *** Contents of shared directory: ***
[2025-06-06 07:32:01] total 408840
[2025-06-06 07:32:01] -rw-r--r--. 2 boincer umatlas 223383069 Jun  6 06:29 ATLAS.root_0
[2025-06-06 07:32:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  6 06:29 start_atlas.sh
[2025-06-06 07:32:01] -rw-r--r--. 2 boincer umatlas    508873 Jun  6 06:29 input.tar.gz
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas 194043062 Jun  6 07:31 HITS.pool.root.1
[2025-06-06 07:32:01] -rw-------. 1 boincer umatlas    696320 Jun  6 07:32 result.tar.gz
07:32:03 (3398458): run_atlas exited; CPU time 26720.481875
07:32:03 (3398458): called boinc_finish(0)

</stderr_txt>
]]>

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