Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:18:33 (23861): wrapper (7.7.26015): starting
06:18:33 (23861): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 06:18:33] Arguments: --nthreads 12
[2025-06-06 06:18:33] Threads: 12
[2025-06-06 06:18:33] Checking for CVMFS
[2025-06-06 06:18:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 06:18:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 06:18:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 06:18:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 06:18:34] 2.11.2.0 2979 38446 86356 146847 0 1 10391967 20275201 1 130560 0 16264496 99.982 6778481 7966 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-06 06:18:34] CVMFS is ok
[2025-06-06 06:18:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:18:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 06:18:34] Further information can be found at the LHC@home message board.
[2025-06-06 06:18:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:18:34] Checking for apptainer binary...
[2025-06-06 06:18:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 06:18:34] Running /usr/bin/apptainer --version
[2025-06-06 06:18:34] apptainer version 1.3.2-1.el7
[2025-06-06 06:18:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:18:35] c-205-21.aglt2.org
[2025-06-06 06:18:35] apptainer works
[2025-06-06 06:18:35] Set ATHENA_PROC_NUMBER=12
[2025-06-06 06:18:35] Set ATHENA_CORE_NUMBER=12
[2025-06-06 06:18:35] Starting ATLAS job with PandaID=6669233980
[2025-06-06 06:18:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:51:03]  *** The last 200 lines of the pilot log: ***
[2025-06-06 07:51:03] 2025-06-06 11:50:33,189 | INFO     | maximum number of monitored processes: 6
[2025-06-06 07:51:03] 2025-06-06 11:50:33,189 | INFO     | will send heartbeat for job in 'finished' state
[2025-06-06 07:51:03] 2025-06-06 11:50:33,189 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2025-06-06 07:51:03] 2025-06-06 11:50:33,189 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 07:51:03] 2025-06-06 11:50:33,190 | INFO     | log transfer has been attempted: DONE
[2025-06-06 07:51:03] 2025-06-06 11:50:33,190 | INFO     | job 6669233980 has state 'running' - writing heartbeat
[2025-06-06 07:51:03] 2025-06-06 11:50:33,190 | INFO     | total number of processed events: 400 (read)
[2025-06-06 07:51:03] 2025-06-06 11:50:33,191 | INFO     | executing command: lscpu
[2025-06-06 07:51:03] 2025-06-06 11:50:33,217 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 07:51:03] 2025-06-06 11:50:35,597 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 07:51:03] 2025-06-06 11:50:36,097 | INFO     | job 6669233980 has state=finished
[2025-06-06 07:51:03] 2025-06-06 11:50:36,098 | INFO     | preparing for final server update for job 6669233980 in state='finished'
[2025-06-06 07:51:03] 2025-06-06 11:50:36,098 | INFO     | this job has now completed (state=finished)
[2025-06-06 07:51:03] 2025-06-06 11:50:36,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 07:51:03] 2025-06-06 11:50:36,099 | INFO     | log transfer has been attempted: DONE
[2025-06-06 07:51:03] 2025-06-06 11:50:36,099 | INFO     | job 6669233980 has finished - writing final server update
[2025-06-06 07:51:03] 2025-06-06 11:50:36,099 | INFO     | total number of processed events: 400 (read)
[2025-06-06 07:51:03] 2025-06-06 11:50:36,100 | INFO     | executing command: lscpu
[2025-06-06 07:51:03] 2025-06-06 11:50:36,317 | INFO     | PID=27818 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 07:51:03] 2025-06-06 11:50:37,961 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 07:51:03] 2025-06-06 11:50:37,961 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669233980/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:51:03] 2025-06-06 11:50:37,963 | INFO     | extracted standard info from prmon json
[2025-06-06 07:51:03] 2025-06-06 11:50:37,963 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:51:03] 2025-06-06 11:50:37,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:51:03] 2025-06-06 11:50:37,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:51:03] 2025-06-06 11:50:37,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:51:03] 2025-06-06 11:50:37,972 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:51:03] 2025-06-06 11:50:37,973 | INFO     | sum of square deviations: 177275882.0
[2025-06-06 07:51:03] 2025-06-06 11:50:37,973 | INFO     | sum of deviations: -2663877442.0
[2025-06-06 07:51:03] 2025-06-06 11:50:37,973 | INFO     | mean x: 1749207969.0
[2025-06-06 07:51:03] 2025-06-06 11:50:37,974 | INFO     | mean y: 2695657.1686746986
[2025-06-06 07:51:03] 2025-06-06 11:50:37,974 | INFO     | -- intersect: 26287577714.53582
[2025-06-06 07:51:03] 2025-06-06 11:50:37,974 | INFO     | intersect: 26287577714.53582
[2025-06-06 07:51:03] 2025-06-06 11:50:37,974 | INFO     | chi2: 0.04496581127872938
[2025-06-06 07:51:03] 2025-06-06 11:50:37,974 | INFO     | -- intersect: 26287577714.53582
[2025-06-06 07:51:03] 2025-06-06 11:50:37,974 | INFO     | current memory leak: -15.03 B/s (using 83 data points, chi2=0.04)
[2025-06-06 07:51:03] 2025-06-06 11:50:37,989 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 07:51:03] 2025-06-06 11:50:40,479 | INFO     | monitor loop #411: job 0:6669233980 is in state 'finished'
[2025-06-06 07:51:03] 2025-06-06 11:50:40,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:51:03] 2025-06-06 11:50:42,579 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 07:51:03] 2025-06-06 11:50:42,579 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669233980/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:51:03] 2025-06-06 11:50:42,580 | INFO     | extracted standard info from prmon json
[2025-06-06 07:51:03] 2025-06-06 11:50:42,580 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:51:03] 2025-06-06 11:50:42,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:51:03] 2025-06-06 11:50:42,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:51:03] 2025-06-06 11:50:42,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:51:03] 2025-06-06 11:50:42,582 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:51:03] 2025-06-06 11:50:42,583 | INFO     | sum of square deviations: 177275882.0
[2025-06-06 07:51:03] 2025-06-06 11:50:42,583 | INFO     | sum of deviations: -2663877442.0
[2025-06-06 07:51:03] 2025-06-06 11:50:42,583 | INFO     | mean x: 1749207969.0
[2025-06-06 07:51:03] 2025-06-06 11:50:42,583 | INFO     | mean y: 2695657.1686746986
[2025-06-06 07:51:03] 2025-06-06 11:50:42,583 | INFO     | -- intersect: 26287577714.53582
[2025-06-06 07:51:03] 2025-06-06 11:50:42,584 | INFO     | intersect: 26287577714.53582
[2025-06-06 07:51:03] 2025-06-06 11:50:42,584 | INFO     | chi2: 0.04496581127872938
[2025-06-06 07:51:03] 2025-06-06 11:50:42,584 | INFO     | -- intersect: 26287577714.53582
[2025-06-06 07:51:03] 2025-06-06 11:50:42,584 | INFO     | current memory leak: -15.03 B/s (using 83 data points, chi2=0.04)
[2025-06-06 07:51:03] 2025-06-06 11:50:42,584 | INFO     | ..............................
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | . Timing measurements:
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | . get job = 0 s
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | . initial setup = 2 s
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | . payload setup = 10 s
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | . stage-in = 0 s
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | . payload execution = 5469 s
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | . stage-out = 0 s
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | . log creation = 0 s
[2025-06-06 07:51:03] 2025-06-06 11:50:42,585 | INFO     | ..............................
[2025-06-06 07:51:03] 2025-06-06 11:50:42,677 | INFO     | 
[2025-06-06 07:51:03] 2025-06-06 11:50:42,677 | INFO     | job summary report
[2025-06-06 07:51:03] 2025-06-06 11:50:42,677 | INFO     | --------------------------------------------------
[2025-06-06 07:51:03] 2025-06-06 11:50:42,677 | INFO     | PanDA job id: 6669233980
[2025-06-06 07:51:03] 2025-06-06 11:50:42,677 | INFO     | task id: 44871837
[2025-06-06 07:51:03] 2025-06-06 11:50:42,678 | INFO     | errors: (none)
[2025-06-06 07:51:03] 2025-06-06 11:50:42,678 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 07:51:03] 2025-06-06 11:50:42,678 | INFO     | pilot state: finished 
[2025-06-06 07:51:03] 2025-06-06 11:50:42,678 | INFO     | transexitcode: 0
[2025-06-06 07:51:03] 2025-06-06 11:50:42,678 | INFO     | exeerrorcode: 0
[2025-06-06 07:51:03] 2025-06-06 11:50:42,678 | INFO     | exeerrordiag: 
[2025-06-06 07:51:03] 2025-06-06 11:50:42,679 | INFO     | exitcode: 0
[2025-06-06 07:51:03] 2025-06-06 11:50:42,679 | INFO     | exitmsg: OK
[2025-06-06 07:51:03] 2025-06-06 11:50:42,679 | INFO     | cpuconsumptiontime: 59132 s
[2025-06-06 07:51:03] 2025-06-06 11:50:42,679 | INFO     | nevents: 400
[2025-06-06 07:51:03] 2025-06-06 11:50:42,679 | INFO     | neventsw: 0
[2025-06-06 07:51:03] 2025-06-06 11:50:42,679 | INFO     | pid: 1886
[2025-06-06 07:51:03] 2025-06-06 11:50:42,680 | INFO     | pgrp: 1886
[2025-06-06 07:51:03] 2025-06-06 11:50:42,680 | INFO     | corecount: 12
[2025-06-06 07:51:03] 2025-06-06 11:50:42,680 | INFO     | event service: False
[2025-06-06 07:51:03] 2025-06-06 11:50:42,680 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 12: 2397654, 5483: 2424097, 5485: 2433038, 5488: 2433222, 5495: 2433392}
[2025-06-06 07:51:03] 2025-06-06 11:50:42,680 | INFO     | --------------------------------------------------
[2025-06-06 07:51:03] 2025-06-06 11:50:42,680 | INFO     | 
[2025-06-06 07:51:03] 2025-06-06 11:50:42,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 07:51:03] 2025-06-06 11:50:42,706 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,707 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 07:51:03] 2025-06-06 11:50:42,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 07:51:03] 2025-06-06 11:50:42,710 | INFO     | job 6669233980 has completed (purged errors)
[2025-06-06 07:51:03] 2025-06-06 11:50:42,710 | INFO     | overall cleanup function is called
[2025-06-06 07:51:03] 2025-06-06 11:50:43,714 | INFO     | --- collectZombieJob: --- 10, [1886]
[2025-06-06 07:51:03] 2025-06-06 11:50:43,715 | INFO     | zombie collector waiting for pid 1886
[2025-06-06 07:51:03] 2025-06-06 11:50:43,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 07:51:03] 2025-06-06 11:50:43,715 | INFO     | collected zombie processes
[2025-06-06 07:51:03] 2025-06-06 11:50:43,715 | INFO     | will attempt to kill all subprocesses of pid=1886
[2025-06-06 07:51:03] 2025-06-06 11:50:43,803 | INFO     | process IDs to be killed: [1886] (in reverse order)
[2025-06-06 07:51:03] 2025-06-06 11:50:43,852 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 07:51:03] 2025-06-06 11:50:43,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 07:51:03] 2025-06-06 11:50:43,856 | INFO     | did not find any defunct processes belonging to 1886
[2025-06-06 07:51:03] 2025-06-06 11:50:43,860 | INFO     | did not find any defunct processes belonging to 1886
[2025-06-06 07:51:03] 2025-06-06 11:50:43,860 | INFO     | ready for new job
[2025-06-06 07:51:03] 2025-06-06 11:50:43,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 07:51:03] 2025-06-06 11:50:43,862 | INFO     | **************************************
[2025-06-06 07:51:03] 2025-06-06 11:50:43,862 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 07:51:03] 2025-06-06 11:50:43,862 | INFO     | **************************************
[2025-06-06 07:51:03] 2025-06-06 11:50:43,862 | INFO     | 
[2025-06-06 07:51:03] 2025-06-06 11:50:43,863 | INFO     | architecture information:
[2025-06-06 07:51:03] 2025-06-06 11:50:43,863 | INFO     | executing command: cat /etc/os-release
[2025-06-06 07:51:03] 2025-06-06 11:50:43,878 | INFO     | cat /etc/os-release:
[2025-06-06 07:51:03] NAME="CentOS Linux"
[2025-06-06 07:51:03] VERSION="7 (Core)"
[2025-06-06 07:51:03] ID="centos"
[2025-06-06 07:51:03] ID_LIKE="rhel fedora"
[2025-06-06 07:51:03] VERSION_ID="7"
[2025-06-06 07:51:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 07:51:03] ANSI_COLOR="0;31"
[2025-06-06 07:51:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 07:51:03] HOME_URL="https://www.centos.org/"
[2025-06-06 07:51:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 07:51:03] 
[2025-06-06 07:51:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 07:51:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 07:51:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 07:51:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 07:51:03] 
[2025-06-06 07:51:03] 2025-06-06 11:50:43,878 | INFO     | **************************************
[2025-06-06 07:51:03] 2025-06-06 11:50:44,381 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 07:51:03] 2025-06-06 11:50:44,397 | INFO     | sufficient remaining disk space (29377953792 B)
[2025-06-06 07:51:03] 2025-06-06 11:50:44,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 07:51:03] 2025-06-06 11:50:44,397 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 07:51:03] 2025-06-06 11:50:44,398 | INFO     | update_server=False
[2025-06-06 07:51:03] 2025-06-06 11:50:44,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 07:51:03] 2025-06-06 11:50:44,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:51:03] 2025-06-06 11:50:44,398 | INFO     | aborting loop
[2025-06-06 07:51:03] 2025-06-06 11:50:44,399 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 07:51:03] 2025-06-06 11:50:44,399 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:51:03] 2025-06-06 11:50:44,399 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 07:51:03] 2025-06-06 11:50:44,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 07:51:03] 2025-06-06 11:50:44,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 07:51:03] 2025-06-06 11:50:44,465 | INFO     | all job control threads have been joined
[2025-06-06 07:51:03] 2025-06-06 11:50:44,922 | INFO     | all payload control threads have been joined
[2025-06-06 07:51:03] 2025-06-06 11:50:45,403 | INFO     | [job] retrieve thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:45,404 | INFO     | [job] job monitor thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:45,405 | INFO     | [job] queue monitor thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:45,417 | INFO     | [data] copytool_in thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:45,470 | INFO     | all data control threads have been joined
[2025-06-06 07:51:03] 2025-06-06 11:50:45,471 | INFO     | [job] control thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:45,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 07:51:03] 2025-06-06 11:50:45,903 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:45,928 | INFO     | [payload] control thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:45,931 | INFO     | [job] validate thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:46,123 | INFO     | [payload] validate_post thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:46,181 | INFO     | [payload] failed_post thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:46,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 07:51:03] 2025-06-06 11:50:46,382 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:46,474 | INFO     | [data] control thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:46,648 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:47,851 | INFO     | [data] copytool_out thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:50,192 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:55,290 | INFO     | job.realtimelogging is not enabled
[2025-06-06 07:51:03] 2025-06-06 11:50:56,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 07:51:03] 2025-06-06 11:50:58,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071084226368)>', '<ExcThread(monitor, started 140070174562048)>']
[2025-06-06 07:51:03] 2025-06-06 11:50:58,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 07:51:03] 2025-06-06 11:50:58,471 | INFO     | [monitor] control thread has ended
[2025-06-06 07:51:03] 2025-06-06 11:51:03,260 | INFO     | all workflow threads have been joined
[2025-06-06 07:51:03] 2025-06-06 11:51:03,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 07:51:03] 2025-06-06 11:51:03,261 | INFO     | traces error code: 0
[2025-06-06 07:51:03] 2025-06-06 11:51:03,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 07:51:03] 2025-06-06 11:51:03,362 [wrapper] ==== pilot stdout END ====
[2025-06-06 07:51:03] 2025-06-06 11:51:03,366 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 07:51:03] 2025-06-06 11:51:03,370 [wrapper] pilotpid: 27818
[2025-06-06 07:51:03] 2025-06-06 11:51:03,374 [wrapper] Pilot exit status: 0
[2025-06-06 07:51:03] 2025-06-06 11:51:03,390 [wrapper] pandaids: 6669233980
[2025-06-06 07:51:03] 2025-06-06 11:51:03,432 [wrapper] cleanup supervisor_pilot 26376 27819
[2025-06-06 07:51:03] 2025-06-06 11:51:03,436 [wrapper] Test setup, not cleaning
[2025-06-06 07:51:03] 2025-06-06 11:51:03,440 [wrapper] apfmon messages muted
[2025-06-06 07:51:03] 2025-06-06 11:51:03,444 [wrapper] ==== wrapper stdout END ====
[2025-06-06 07:51:03] 2025-06-06 11:51:03,447 [wrapper] ==== wrapper stderr END ====
[2025-06-06 07:51:03]  *** Error codes and diagnostics ***
[2025-06-06 07:51:03]     "exeErrorCode": 0,
[2025-06-06 07:51:03]     "exeErrorDiag": "",
[2025-06-06 07:51:03]     "pilotErrorCode": 0,
[2025-06-06 07:51:03]     "pilotErrorDiag": "",
[2025-06-06 07:51:03]  *** Listing of results directory ***
[2025-06-06 07:51:03] total 416472
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas    495897 May 28 23:56 pilot3.tar.gz
[2025-06-06 07:51:03] -rwx------ 1 boincer umatlas     37140 May 28 23:59 runpilot2-wrapper.sh
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas      5111 May 28 23:59 queuedata.json
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas       100 Jun  6 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 07:51:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  6 06:18 run_atlas
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas       105 Jun  6 06:18 job.xml
[2025-06-06 07:51:03] -rw-r--r-- 2 boincer umatlas 225247566 Jun  6 06:18 EVNT.44871834._003672.pool.root.1
[2025-06-06 07:51:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 06:18 start_atlas.sh
[2025-06-06 07:51:03] drwxrwx--x 2 boincer umatlas      4096 Jun  6 06:18 shared
[2025-06-06 07:51:03] -rw-r--r-- 2 boincer umatlas    508882 Jun  6 06:18 input.tar.gz
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas         0 Jun  6 06:18 boinc_lockfile
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas      2559 Jun  6 06:18 pandaJob.out
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas    987967 Jun  6 06:18 agis_schedconf.cvmfs.json
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas   1598969 Jun  6 06:18 agis_ddmendpoints.agis.ALL.json
[2025-06-06 07:51:03] drwx------ 4 boincer umatlas      4096 Jun  6 06:18 pilot3
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas      5866 Jun  6 07:48 init_data.xml
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas 195585720 Jun  6 07:50 HITS.44871837._094545.pool.root.1
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas        95 Jun  6 07:50 pilot_heartbeat.json
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas      1047 Jun  6 07:50 memory_monitor_summary.json
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas       529 Jun  6 07:50 boinc_task_state.xml
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas    384255 Jun  6 07:50 log.44871837._094545.job.log.tgz.1
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas      7750 Jun  6 07:50 heartbeat.json
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 07:50 boinc_mmap_file
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas        27 Jun  6 07:50 wrapper_checkpoint.txt
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas      4548 Jun  6 07:51 pilotlog.txt
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas    516551 Jun  6 07:51 log.44871837._094545.job.log.1
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas       357 Jun  6 07:51 output.list
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas       620 Jun  6 07:51 runtime_log
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas    921600 Jun  6 07:51 result.tar.gz
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas      8661 Jun  6 07:51 runtime_log.err
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas       660 Jun  6 07:51 GqALDmlbje7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVaUKDmVCufOm.diag
[2025-06-06 07:51:03] -rw-r--r-- 1 boincer umatlas     21745 Jun  6 07:51 stderr.txt
[2025-06-06 07:51:03] HITS file was successfully produced:
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas 195585720 Jun  6 07:50 shared/HITS.pool.root.1
[2025-06-06 07:51:03]  *** Contents of shared directory: ***
[2025-06-06 07:51:03] total 412392
[2025-06-06 07:51:03] -rw-r--r-- 2 boincer umatlas 225247566 Jun  6 06:18 ATLAS.root_0
[2025-06-06 07:51:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  6 06:18 start_atlas.sh
[2025-06-06 07:51:03] -rw-r--r-- 2 boincer umatlas    508882 Jun  6 06:18 input.tar.gz
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas 195585720 Jun  6 07:50 HITS.pool.root.1
[2025-06-06 07:51:03] -rw------- 1 boincer umatlas    921600 Jun  6 07:51 result.tar.gz
07:51:05 (23861): run_atlas exited; CPU time 59109.566901
07:51:05 (23861): called boinc_finish(0)

</stderr_txt>
]]>

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