Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-06 12:16:01 (24508): Detected: vboxwrapper 26206
2025-06-06 12:16:01 (24508): Detected: BOINC client v8.0.2
2025-06-06 12:16:01 (24508): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-06-06 12:16:02 (24508): Successfully copied 'init_data.xml' to the shared directory.
2025-06-06 12:16:02 (24508): Create VM. (boinc_e3a1e7391a403454, slot#27)
2025-06-06 12:16:03 (24508): Setting Memory Size for VM. (4400MB)
2025-06-06 12:16:03 (24508): Setting CPU Count for VM. (4)
2025-06-06 12:16:03 (24508): Setting Chipset Options for VM.
2025-06-06 12:16:03 (24508): Setting Graphics Controller Options for VM.
2025-06-06 12:16:04 (24508): Setting Boot Options for VM.
2025-06-06 12:16:04 (24508): Setting Network Configuration for NAT.
2025-06-06 12:16:04 (24508): Enabling VM Network Access.
2025-06-06 12:16:04 (24508): Disabling USB Support for VM.
2025-06-06 12:16:05 (24508): Disabling COM Port Support for VM.
2025-06-06 12:16:05 (24508): Disabling LPT Port Support for VM.
2025-06-06 12:16:05 (24508): Disabling Audio Support for VM.
2025-06-06 12:16:05 (24508): Disabling Clipboard Support for VM.
2025-06-06 12:16:06 (24508): Disabling Drag and Drop Support for VM.
2025-06-06 12:16:06 (24508): Adding storage controller(s) to VM.
2025-06-06 12:16:06 (24508): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-06 12:16:07 (24508): Adding VirtualBox Guest Additions to VM.
2025-06-06 12:16:07 (24508): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-06 12:16:07 (24508): forwarding host port 62913 to guest port 80
2025-06-06 12:16:08 (24508): Enabling remote desktop for VM.
2025-06-06 12:16:08 (24508): Required extension pack not installed, remote desktop not enabled.
2025-06-06 12:16:08 (24508): Enabling shared directory for VM.
2025-06-06 12:16:08 (24508): Starting VM using VBoxManage interface. (boinc_e3a1e7391a403454, slot#27)
2025-06-06 12:16:13 (24508): Successfully started VM. (PID = '34156')
2025-06-06 12:16:13 (24508): Reporting VM Process ID to BOINC.
2025-06-06 12:16:13 (24508): Guest Log: BIOS: VirtualBox 7.1.10
2025-06-06 12:16:13 (24508): Guest Log: CPUID EDX: 0x178bfbff
2025-06-06 12:16:13 (24508): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-06 12:16:13 (24508): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-06 12:16:13 (24508): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-06 12:16:13 (24508): Detected: Web Application Enabled (http://localhost:62913)
2025-06-06 12:16:13 (24508): Preference change detected
2025-06-06 12:16:13 (24508): Setting CPU throttle for VM. (100%)
2025-06-06 12:16:14 (24508): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 12:16:15 (24508): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-06 12:16:15 (24508): Guest Log: BIOS: Booting from Hard Disk...
2025-06-06 12:16:17 (24508): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-06 12:16:17 (24508): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-06 12:16:17 (24508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-06 12:16:22 (24508): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-06 12:16:22 (24508): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-06 12:16:26 (24508): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-06 12:16:26 (24508): Guest Log: 00:00:00.000098 main     Log opened 2025-06-06T12:16:24.683942000Z
2025-06-06 12:16:26 (24508): Guest Log: 00:00:00.000207 main     OS Product: Linux
2025-06-06 12:16:26 (24508): Guest Log: 00:00:00.000226 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-06 12:16:26 (24508): Guest Log: 00:00:00.000241 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-06 12:16:26 (24508): Guest Log: 00:00:00.000255 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-06 12:16:26 (24508): Guest Log: 00:00:00.000255 main     Process ID: 1306
2025-06-06 12:16:26 (24508): Guest Log: 00:00:00.000256 main     Package type: LINUX_64BITS_GENERIC
2025-06-06 12:16:26 (24508): Guest Log: 00:00:00.000732 main     5.2.32 r132073 started. Verbose level = 0
2025-06-06 12:16:26 (24508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-06 12:16:26 (24508): Guest Log: [INFO] Mounting shared directory
2025-06-06 12:16:26 (24508): Guest Log: [INFO] Checking for init_data.xml
2025-06-06 12:16:32 (24508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-06 12:16:32 (24508): Guest Log: [INFO] Detected branch: prod
2025-06-06 12:16:32 (24508): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-06 12:16:32 (24508): Guest Log: Copying input files
2025-06-06 12:16:33 (24508): Guest Log: Copied input files into RunAtlas.
2025-06-06 12:16:33 (24508): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-06 12:16:33 (24508): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-06 12:16:33 (24508): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-06 12:16:33 (24508): Guest Log: Further information can be found at the LHC@home message board.
2025-06-06 12:16:36 (24508): Guest Log: 00:00:10.010321 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 159 789 000ns (GuestNow=1 749 204 996 525 666 000 ns GuestLast=1 749 212 184 685 455 000 ns fSetTimeLastLoop=true )
2025-06-06 12:16:41 (24508): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-06 12:16:42 (24508): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-06 12:16:42 (24508): Guest Log: 2.6.3.0 1582 0 30192 146847 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-06 12:16:42 (24508): Guest Log: copied the webapp to /var/www
2025-06-06 12:16:42 (24508): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-06 12:16:42 (24508): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-06 12:16:43 (24508): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-06 12:16:43 (24508): Guest Log:  *** Starting ATLAS job. (PandaID=6678245523 taskID=45006595) ***
2025-06-06 13:56:16 (24508): Status Report: Elapsed Time: '6000.000000'
2025-06-06 13:56:16 (24508): Status Report: CPU Time: '20573.531250'
2025-06-06 14:11:58 (24508): Guest Log:  *** Job finished ***
2025-06-06 14:11:58 (24508): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:11:52,350 | INFO     | [payload] failed_post thread has finished
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:11:52,960 | INFO     | [data] copytool_out thread has finished
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:11:55,276 | INFO     | [data] queue_monitor thread has finished
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:11:57,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262130353984)>', '<ExcThread(monitor, started 140261367715584)>']
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:11:57,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:11:57,095 | INFO     | [monitor] control thread has ended
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,085 | INFO     | all workflow threads have been joined
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,086 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,086 | INFO     | traces error code: 0
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,177 [wrapper] ==== pilot stdout END ====
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,180 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,183 [wrapper] pilotpid: 5944
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,186 [wrapper] Pilot exit status: 0
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,275 [wrapper] pandaids: 6678245523
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,297 [wrapper] cleanup supervisor_pilot  3358 5945
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,299 [wrapper] Test setup, not cleaning
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,302 [wrapper] apfmon messages muted
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,305 [wrapper] ==== wrapper stdout END ====
2025-06-06 14:11:58 (24508): Guest Log: 2025-06-06 12:12:02,308 [wrapper] ==== wrapper stderr END ====
2025-06-06 14:11:58 (24508): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 14:11:58 (24508): Guest Log:     "exeErrorCode": 0,
2025-06-06 14:11:58 (24508): Guest Log:     "exeErrorDiag": "",
2025-06-06 14:11:58 (24508): Guest Log:     "pilotErrorCode": 0,
2025-06-06 14:11:58 (24508): Guest Log:     "pilotErrorDiag": "",
2025-06-06 14:11:58 (24508): Guest Log:  *** Listing of results directory ***
2025-06-06 14:11:58 (24508): Guest Log: total 180804
2025-06-06 14:11:58 (24508): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 00:59 pilot3.tar.gz
2025-06-06 14:11:58 (24508): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 01:06 runpilot2-wrapper.sh
2025-06-06 14:11:58 (24508): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 01:06 queuedata.json
2025-06-06 14:11:58 (24508): Guest Log: -rwxr-xr-x. 1 atlas atlas      9117 Jun  6 10:16 init_data.xml
2025-06-06 14:11:58 (24508): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Jun  6 10:16 input.tar.gz
2025-06-06 14:11:58 (24508): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 10:16 start_atlas.sh
2025-06-06 14:11:58 (24508): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 10:16 EVNT.45006593._001994.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 14:11:58 (24508): Guest Log: -rw-r--r--. 1 atlas atlas      2522 Jun  6 10:16 pandaJob.out
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas    985686 Jun  6 10:22 agis_schedconf.cvmfs.json
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  6 10:22 agis_ddmendpoints.agis.ALL.json
2025-06-06 14:11:58 (24508): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 10:23 pilot3
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas 179738756 Jun  6 12:11 HITS.45006595._049722.pool.root.1
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  6 12:11 memory_monitor_summary.json
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas        95 Jun  6 12:11 pilot_heartbeat.json
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas    239898 Jun  6 12:11 log.45006595._049722.job.log.tgz.1
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas      7671 Jun  6 12:11 heartbeat.json
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  6 12:12 pilotlog.txt
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas    583548 Jun  6 12:12 log.45006595._049722.job.log.1
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 12:12 output.list
2025-06-06 14:11:58 (24508): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  6 12:12 runtime_log
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas    839680 Jun  6 12:12 result.tar.gz
2025-06-06 14:11:58 (24508): Guest Log: -rw-r--r--. 1 atlas atlas      8555 Jun  6 12:12 runtime_log.err
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas       643 Jun  6 12:12 g4nKDmDlrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsRaKDmVMLY1m.diag
2025-06-06 14:11:58 (24508): Guest Log: Looking for outputfile HITS.45006595._049722.pool.root.1
2025-06-06 14:11:58 (24508): Guest Log: HITS file was successfully produced
2025-06-06 14:11:58 (24508): Guest Log: -rw-------. 1 atlas atlas 179738756 Jun  6 12:11 /home/atlas/RunAtlas/HITS.45006595._049722.pool.root.1
2025-06-06 14:11:58 (24508): Guest Log: Successfully finished the ATLAS job!
2025-06-06 14:11:58 (24508): Guest Log: Copying the results back to the shared directory!
2025-06-06 14:11:59 (24508): Guest Log:  *** Contents of shared directory: ***
2025-06-06 14:11:59 (24508): Guest Log: total 386276
2025-06-06 14:11:59 (24508): Guest Log: -rwxrwxrwx. 1 root root 214421936 Jun  6 10:16 ATLAS.root_0
2025-06-06 14:11:59 (24508): Guest Log: -rwxrwxrwx. 1 root root 179738756 Jun  6 12:11 HITS.pool.root.1
2025-06-06 14:11:59 (24508): Guest Log: -rwxrwxrwx. 1 root root      9117 Jun  6 10:16 init_data.xml
2025-06-06 14:11:59 (24508): Guest Log: -rwxrwxrwx. 1 root root    508880 Jun  6 10:15 input.tar.gz
2025-06-06 14:11:59 (24508): Guest Log: -rwxrwxrwx. 1 root root    839680 Jun  6 12:11 result.tar.gz
2025-06-06 14:11:59 (24508): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  6 10:15 start_atlas.sh
2025-06-06 14:11:59 (24508): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 14:11:59 (24508): VM Completion File Detected.
2025-06-06 14:11:59 (24508): Powering off VM.
2025-06-06 14:11:59 (24508): Successfully stopped VM.
2025-06-06 14:11:59 (24508): Deregistering VM. (boinc_e3a1e7391a403454, slot#27)
2025-06-06 14:11:59 (24508): Removing network bandwidth throttle group from VM.
2025-06-06 14:11:59 (24508): Removing VM from VirtualBox.
14:12:05 (24508): called boinc_finish(0)

</stderr_txt>
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